RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 CPLX2Q6PUV4 134 aaKnown RBP13.72□□□□□ -0.21
SNHG4-202ENST00000505522 HFE2Q6ZVN8 426 aa13.72□□□□□ -0.21
SNHG4-202ENST00000505522 FAM177A1Q8N128 213 aaPredicted RBP13.72□□□□□ -0.21
SNHG4-202ENST00000505522 CDCA3Q99618 268 aaPredicted RBP13.72□□□□□ -0.21
SNHG4-202ENST00000505522 TCF25Q9BQ70 676 aa13.72□□□□□ -0.21
SNHG4-202ENST00000505522 FDXACB1Q9BRP7 624 aaPredicted RBP13.72□□□□□ -0.21
SNHG4-202ENST00000505522 PHF20Q9BVI0 1012 aa13.72□□□□□ -0.21
SNHG4-202ENST00000505522 GCOM2Q9BZD3 368 aaPredicted RBP13.72□□□□□ -0.21
SNHG4-202ENST00000505522 ENTPD7Q9NQZ7 604 aa13.72□□□□□ -0.21
SNHG4-202ENST00000505522 GJB4Q9NTQ9 266 aa13.72□□□□□ -0.21
SNHG4-202ENST00000505522 SPG21Q9NZD8 308 aa13.72□□□□□ -0.21
SNHG4-202ENST00000505522 PUF60Q9UHX1 559 aaKnown RBP13.72□□□□□ -0.21
SNHG4-202ENST00000505522 VAV3Q9UKW4 847 aa13.72□□□□□ -0.21
SNHG4-202ENST00000505522 PPM1AP35813 382 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 DNM2P50570 870 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 PSMC5P62195 406 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 CDC42EP1Q00587 391 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 PPP2R5CQ13362 524 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 CBX2Q14781 532 aaPredicted RBP13.71□□□□□ -0.21
SNHG4-202ENST00000505522 PLA2G4FQ68DD2 849 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 LLGL2Q6P1M3 1020 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 TMEM184AQ6ZMB5 413 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 RHPN2Q8IUC4 686 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 KSR1Q8IVT5 923 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 SLC39A11Q8N1S5 342 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 ZNF579Q8NAF0 562 aaKnown RBP13.71□□□□□ -0.21
SNHG4-202ENST00000505522 OXER1Q8TDS5 423 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 SUSD6Q92537 303 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 LPPQ93052 612 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 S1PR5Q9H228 398 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 KCNMB3Q9NPA1 279 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 NGRNQ9NPE2 291 aaKnown RBP13.71□□□□□ -0.21
SNHG4-202ENST00000505522 DACT1Q9NYF0 836 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 SUCLA2Q9P2R7 463 aaPredicted RBP13.71□□□□□ -0.21
SNHG4-202ENST00000505522 TPCN1Q9ULQ1 816 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 WDFY4Q6ZS81 3184 aa13.71□□□□□ -0.21
SNHG4-202ENST00000505522 CCDC194A0A1B0GVG4 234 aa13.7□□□□□ -0.22
SNHG4-202ENST00000505522 FSD2A1L4K1 749 aa13.7□□□□□ -0.22
SNHG4-202ENST00000505522 NT5C1B-RDH14C9J2C7 533 aa13.7□□□□□ -0.22
SNHG4-202ENST00000505522 TECP42680 631 aa13.7□□□□□ -0.22
SNHG4-202ENST00000505522 PHKA2P46019 1235 aa13.7□□□□□ -0.22
SNHG4-202ENST00000505522 NPEPPSP55786 919 aa13.7□□□□□ -0.22
SNHG4-202ENST00000505522 KRT17Q04695 432 aa13.7□□□□□ -0.22
SNHG4-202ENST00000505522 LONRF3Q496Y0 759 aa13.7□□□□□ -0.22
SNHG4-202ENST00000505522 ANKRD54Q6NXT1 300 aa13.7□□□□□ -0.22
SNHG4-202ENST00000505522 TMC7Q7Z402 723 aa13.7□□□□□ -0.22
SNHG4-202ENST00000505522 NEK8Q86SG6 692 aa13.7□□□□□ -0.22
SNHG4-202ENST00000505522 ZNF410Q86VK4 478 aa13.7□□□□□ -0.22
SNHG4-202ENST00000505522 EDAQ92838 391 aa13.7□□□□□ -0.22
SNHG4-202ENST00000505522 RPGRIP1Q96KN7 1286 aa13.7□□□□□ -0.22
SNHG4-202ENST00000505522 TRAIPQ9BWF2 469 aa13.7□□□□□ -0.22
SNHG4-202ENST00000505522 APOL5Q9BWW9 433 aa13.7□□□□□ -0.22
SNHG4-202ENST00000505522 PHF7Q9BWX1 381 aaPredicted RBP13.7□□□□□ -0.22
SNHG4-202ENST00000505522 SLKQ9H2G2 1235 aaPredicted RBP13.7□□□□□ -0.22
SNHG4-202ENST00000505522 CHST12Q9NRB3 414 aa13.7□□□□□ -0.22
SNHG4-202ENST00000505522 WRAP73Q9P2S5 460 aaPredicted RBP13.7□□□□□ -0.22
SNHG4-202ENST00000505522 STK36Q9NRP7 1315 aa13.69□□□□□ -0.22
SNHG4-202ENST00000505522 MEIS3P2A8K0S8 358 aa13.69□□□□□ -0.22
SNHG4-202ENST00000505522 CCNT1O60563 726 aaKnown RBP13.69□□□□□ -0.22
SNHG4-202ENST00000505522 PFKFB2O60825 505 aa13.69□□□□□ -0.22
SNHG4-202ENST00000505522 CDKL5O76039 1030 aa13.69□□□□□ -0.22
SNHG4-202ENST00000505522 CTDNEP1O95476 244 aa13.69□□□□□ -0.22
SNHG4-202ENST00000505522 SFPQP23246 707 aaKnown RBP eCLIP13.69□□□□□ -0.22
SNHG4-202ENST00000505522 QARSP47897 775 aaKnown RBP13.69□□□□□ -0.22
SNHG4-202ENST00000505522 BCAR1P56945 870 aa13.69□□□□□ -0.22
SNHG4-202ENST00000505522 EARS2Q5JPH6 523 aaKnown RBP13.69□□□□□ -0.22
SNHG4-202ENST00000505522 TWF2Q6IBS0 349 aaKnown RBP13.69□□□□□ -0.22
SNHG4-202ENST00000505522 PPP4R3AQ6IN85 833 aa13.69□□□□□ -0.22
SNHG4-202ENST00000505522 SYCE2Q6PIF2 218 aa13.69□□□□□ -0.22
SNHG4-202ENST00000505522 PIK3AP1Q6ZUJ8 805 aa13.69□□□□□ -0.22
SNHG4-202ENST00000505522 TMEM173Q86WV6 379 aaPredicted RBP13.69□□□□□ -0.22
SNHG4-202ENST00000505522 HAS1Q92839 578 aa13.69□□□□□ -0.22
SNHG4-202ENST00000505522 FAM20AQ96MK3 541 aa13.69□□□□□ -0.22
SNHG4-202ENST00000505522 NLRP4Q96MN2 994 aa13.69□□□□□ -0.22
SNHG4-202ENST00000505522 MRPL9Q9BYD2 267 aaKnown RBP13.69□□□□□ -0.22
SNHG4-202ENST00000505522 IFT122Q9HBG6 1241 aa13.69□□□□□ -0.22
SNHG4-202ENST00000505522 CYP26B1Q9NR63 512 aa13.69□□□□□ -0.22
SNHG4-202ENST00000505522 PIN4Q9Y237 131 aaKnown RBP13.69□□□□□ -0.22
SNHG4-202ENST00000505522 FAM205CA6NFA0 338 aa13.68□□□□□ -0.22
SNHG4-202ENST00000505522 C2orf71A6NGG8 1288 aa13.68□□□□□ -0.22
SNHG4-202ENST00000505522 P4HBP07237 508 aaKnown RBP13.68□□□□□ -0.22
SNHG4-202ENST00000505522 ALDH7A1P49419 539 aaKnown RBP13.68□□□□□ -0.22
SNHG4-202ENST00000505522 SMC1AQ14683 1233 aaKnown RBP13.68□□□□□ -0.22
SNHG4-202ENST00000505522 CATSPER4Q7RTX7 472 aa13.68□□□□□ -0.22
SNHG4-202ENST00000505522 MRPL43Q8N983 215 aaKnown RBP13.68□□□□□ -0.22
SNHG4-202ENST00000505522 FBXL18Q96ME1 805 aa13.68□□□□□ -0.22
SNHG4-202ENST00000505522 JPH2Q9BR39 696 aaPredicted RBP13.68□□□□□ -0.22
SNHG4-202ENST00000505522 INO80BQ9C086 356 aaPredicted RBP13.68□□□□□ -0.22
SNHG4-202ENST00000505522 FAM105AQ9NUU6 356 aa13.68□□□□□ -0.22
SNHG4-202ENST00000505522 CDH22Q9UJ99 828 aa13.68□□□□□ -0.22
SNHG4-202ENST00000505522 COL4A3BPQ9Y5P4 624 aa13.68□□□□□ -0.22
SNHG4-202ENST00000505522 ZBTB39O15060 712 aa13.67□□□□□ -0.22
SNHG4-202ENST00000505522 ZC3H11AO75152 810 aaKnown RBP eCLIP13.67□□□□□ -0.22
SNHG4-202ENST00000505522 SRGAP2BP0DMP2 458 aa13.67□□□□□ -0.22
SNHG4-202ENST00000505522 GCFC2P16383 781 aaKnown RBP13.67□□□□□ -0.22
SNHG4-202ENST00000505522 ZXDAP98168 799 aa13.67□□□□□ -0.22
SNHG4-202ENST00000505522 TRIM67Q6ZTA4 783 aa13.67□□□□□ -0.22
SNHG4-202ENST00000505522 BCL7CQ8WUZ0 217 aaPredicted RBP13.67□□□□□ -0.22
SNHG4-202ENST00000505522 PRPF31Q8WWY3 499 aaKnown RBP13.67□□□□□ -0.22
SNHG4-202ENST00000505522 AUTS2Q8WXX7 1259 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms