RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 SFI1A8K8P3 1242 aa12.35□□□□□ -0.43
NFKB1-205ENST00000505458 ZNF263O14978 683 aa12.35□□□□□ -0.43
NFKB1-205ENST00000505458 CCNE2O96020 404 aa12.35□□□□□ -0.43
NFKB1-205ENST00000505458 TGFB3P10600 412 aa12.35□□□□□ -0.43
NFKB1-205ENST00000505458 CLCN6P51797 869 aa12.35□□□□□ -0.43
NFKB1-205ENST00000505458 CYP27A1Q02318 531 aa12.35□□□□□ -0.43
NFKB1-205ENST00000505458 VGLL4Q14135 290 aa12.35□□□□□ -0.43
NFKB1-205ENST00000505458 CAGE1Q8TC20 777 aa12.35□□□□□ -0.43
NFKB1-205ENST00000505458 TLR2O60603 784 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 SUPT20HL2P0C7V6 817 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 CASP4P49662 377 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 CYP2J2P51589 502 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 HIRAP54198 1017 aaPredicted RBP12.34□□□□□ -0.43
NFKB1-205ENST00000505458 IRX3P78415 501 aaPredicted RBP12.34□□□□□ -0.43
NFKB1-205ENST00000505458 FAM133AQ8N9E0 248 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 APEX2Q9UBZ4 518 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 MACROD2A1Z1Q3 448 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 BACH1O14867 736 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 NKRFO15226 690 aaKnown RBP eCLIP12.34□□□□□ -0.43
NFKB1-205ENST00000505458 PAFAH1B1P43034 410 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 GPS2Q13227 327 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 NEDD9Q14511 834 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 DPY19L2P1Q6NXN4 242 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.34□□□□□ -0.43
NFKB1-205ENST00000505458 TMC2Q8TDI7 906 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 L3MBTL3Q96JM7 780 aaPredicted RBP12.34□□□□□ -0.43
NFKB1-205ENST00000505458 FAM167AQ96KS9 214 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 ACBD3Q9H3P7 528 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 RIPK3Q9Y572 518 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 MYH9P35579 1960 aaKnown RBP12.34□□□□□ -0.43
NFKB1-205ENST00000505458 A0A0G2JLL6 359 aaPredicted RBP12.34□□□□□ -0.43
NFKB1-205ENST00000505458 PLEKP08567 350 aaPredicted RBP12.34□□□□□ -0.43
NFKB1-205ENST00000505458 GARTP22102 1010 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 SOX5P35711 763 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 RFC5P40937 340 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 NPEPPSP55786 919 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 PPIL2Q13356 520 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 NAA30Q147X3 362 aaPredicted RBP12.34□□□□□ -0.43
NFKB1-205ENST00000505458 FAM160B1Q5W0V3 765 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 WDR93Q6P2C0 686 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 FASTKD5Q7L8L6 764 aaKnown RBP12.34□□□□□ -0.43
NFKB1-205ENST00000505458 PRRT2Q7Z6L0 340 aaPredicted RBP12.34□□□□□ -0.43
NFKB1-205ENST00000505458 ANKRD35Q8N283 1001 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 INTS2Q9H0H0 1204 aaKnown RBP12.34□□□□□ -0.43
NFKB1-205ENST00000505458 SIX2Q9NPC8 291 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 KMT5AQ9NQR1 393 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 FHOD1Q9Y613 1164 aa12.34□□□□□ -0.43
NFKB1-205ENST00000505458 SLC9A1P19634 815 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 VAMP7P51809 220 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 FAM102BQ5T8I3 360 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 IRF2BP2Q7Z5L9 587 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 SYCE1Q8N0S2 351 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 UPF1Q92900 1129 aaKnown RBP eCLIP12.33□□□□□ -0.44
NFKB1-205ENST00000505458 CEP170P1Q96L14 293 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.33□□□□□ -0.44
NFKB1-205ENST00000505458 GABBR1Q9UBS5 961 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 PCDHGC5Q9Y5F6 944 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 A0A0U1RQJ8 604 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 GRID2IPA4D2P6 1211 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 SPDYE5A6NIY4 337 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 ZBTB39O15060 712 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 GAS2O43903 313 aaKnown RBP12.33□□□□□ -0.44
NFKB1-205ENST00000505458 ATP1A1P05023 1023 aaKnown RBP12.33□□□□□ -0.44
NFKB1-205ENST00000505458 ACTR2P61160 394 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 GFPT1Q06210 699 aaPredicted RBP12.33□□□□□ -0.44
NFKB1-205ENST00000505458 PLS1Q14651 629 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 CLUL1Q15846 466 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 BRDTQ58F21 947 aaPredicted RBP12.33□□□□□ -0.44
NFKB1-205ENST00000505458 ABHD15Q6UXT9 468 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 ATRIPQ8WXE1 791 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 HSPBP1Q9NZL4 362 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 TBX20Q9UMR3 447 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 SCAF8Q9UPN6 1271 aaKnown RBP12.33□□□□□ -0.44
NFKB1-205ENST00000505458 KCNH4Q9UQ05 1017 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 ATP9AO75110 1047 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 ATG7O95352 703 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 TRIM10Q9UDY6 481 aa12.33□□□□□ -0.44
NFKB1-205ENST00000505458 POLR2AP24928 1970 aaKnown RBP12.33□□□□□ -0.44
NFKB1-205ENST00000505458 RCCD1A6NED2 376 aa12.32□□□□□ -0.44
NFKB1-205ENST00000505458 OSBPP22059 807 aa12.32□□□□□ -0.44
NFKB1-205ENST00000505458 EDNRBP24530 442 aa12.32□□□□□ -0.44
NFKB1-205ENST00000505458 PEX3P56589 373 aa12.32□□□□□ -0.44
NFKB1-205ENST00000505458 KCNA1Q09470 495 aa12.32□□□□□ -0.44
NFKB1-205ENST00000505458 PARD6BQ9BYG5 372 aa12.32□□□□□ -0.44
NFKB1-205ENST00000505458 RNF181Q9P0P0 153 aa12.32□□□□□ -0.44
NFKB1-205ENST00000505458 PUF60Q9UHX1 559 aaKnown RBP12.32□□□□□ -0.44
NFKB1-205ENST00000505458 LCTP09848 1927 aa12.32□□□□□ -0.44
NFKB1-205ENST00000505458 ALDH5A1P51649 535 aaPredicted RBP12.32□□□□□ -0.44
NFKB1-205ENST00000505458 DGKZQ13574 1117 aa12.32□□□□□ -0.44
NFKB1-205ENST00000505458 UGCGQ16739 394 aa12.32□□□□□ -0.44
NFKB1-205ENST00000505458 KIAA0753Q2KHM9 967 aa12.32□□□□□ -0.44
NFKB1-205ENST00000505458 CCDC181Q5TID7 509 aa12.32□□□□□ -0.44
NFKB1-205ENST00000505458 LRRN4CLQ8ND94 238 aa12.32□□□□□ -0.44
NFKB1-205ENST00000505458 TMEM161BQ8NDZ6 487 aa12.32□□□□□ -0.44
NFKB1-205ENST00000505458 CYP26B1Q9NR63 512 aa12.32□□□□□ -0.44
NFKB1-205ENST00000505458 NRBP2Q9NSY0 501 aa12.32□□□□□ -0.44
NFKB1-205ENST00000505458 AGTPBP1Q9UPW5 1226 aa12.32□□□□□ -0.44
NFKB1-205ENST00000505458 F8VZ95 297 aa12.32□□□□□ -0.44
NFKB1-205ENST00000505458 ZRANB2O95218 330 aaKnown RBP eCLIP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms