RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 BCAS3Q9H6U6 928 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 SLC38A10Q9HBR0 1119 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 PNMA2Q9UL42 364 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 FZD1Q9UP38 647 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 ANKRD65E5RJM6 399 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 ZEB2O60315 1214 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 ALAS1P13196 640 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 HIRAP54198 1017 aaPredicted RBP18.43■□□□□ 0.54
LIN54-204ENST00000505397 UBXN2AP68543 259 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 CUL1Q13616 776 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 DCAF17Q5H9S7 520 aaPredicted RBP18.43■□□□□ 0.54
LIN54-204ENST00000505397 KLHL7Q8IXQ5 586 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 METTL13Q8N6R0 699 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 GOLPH3Q9H4A6 298 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 A0A087WUV0 522 aaPredicted RBP18.42■□□□□ 0.54
LIN54-204ENST00000505397 ZBED4O75132 1171 aa18.42■□□□□ 0.54
LIN54-204ENST00000505397 KCNA1Q09470 495 aa18.42■□□□□ 0.54
LIN54-204ENST00000505397 KCTD16Q68DU8 428 aa18.42■□□□□ 0.54
LIN54-204ENST00000505397 CYP2W1Q8TAV3 490 aa18.42■□□□□ 0.54
LIN54-204ENST00000505397 EIF2AK1Q9BQI3 630 aaKnown RBP18.42■□□□□ 0.54
LIN54-204ENST00000505397 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.42■□□□□ 0.547e-8■■■■■ 31.4
LIN54-204ENST00000505397 RAVER2Q9HCJ3 691 aaKnown RBP18.42■□□□□ 0.54
LIN54-204ENST00000505397 SUCLA2Q9P2R7 463 aaPredicted RBP18.42■□□□□ 0.54
LIN54-204ENST00000505397 RABGAP1Q9Y3P9 1069 aa18.42■□□□□ 0.54
LIN54-204ENST00000505397 ZHX2Q9Y6X8 837 aa18.42■□□□□ 0.54
LIN54-204ENST00000505397 PARP14Q460N5 1801 aa18.42■□□□□ 0.54
LIN54-204ENST00000505397 ZMYM2Q9UBW7 1377 aa18.42■□□□□ 0.54
LIN54-204ENST00000505397 EML1O00423 815 aa18.42■□□□□ 0.54
LIN54-204ENST00000505397 DDX3XO00571 662 aaKnown RBP eCLIP18.42■□□□□ 0.544e-10■■■■□ 20
LIN54-204ENST00000505397 EIF3DO15371 548 aaKnown RBP eCLIP18.42■□□□□ 0.543e-6■■□□□ 11.9
LIN54-204ENST00000505397 FDX1P10109 184 aa18.42■□□□□ 0.54
LIN54-204ENST00000505397 GAP43P17677 238 aa18.42■□□□□ 0.54
LIN54-204ENST00000505397 NOP2P46087 812 aaKnown RBP18.42■□□□□ 0.54
LIN54-204ENST00000505397 RINT1Q6NUQ1 792 aa18.42■□□□□ 0.54
LIN54-204ENST00000505397 SLC30A5Q8TAD4 765 aa18.42■□□□□ 0.54
LIN54-204ENST00000505397 KLRG1Q96E93 195 aa18.42■□□□□ 0.54
LIN54-204ENST00000505397 ADARB2Q9NS39 739 aaKnown RBP18.42■□□□□ 0.54
LIN54-204ENST00000505397 GCNT4Q9P109 453 aa18.42■□□□□ 0.54
LIN54-204ENST00000505397 IGLV3-22A0A075B6J6 115 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 PGRMC1O00264 195 aaKnown RBP18.41■□□□□ 0.54
LIN54-204ENST00000505397 GFPT2O94808 682 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 GCNT3O95395 438 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 HSD17B4P51659 736 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 PDCLQ13371 301 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 TTC19Q6DKK2 380 aaPredicted RBP18.41■□□□□ 0.54
LIN54-204ENST00000505397 LRIG3Q6UXM1 1119 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 DNAAF5Q86Y56 855 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 LMBR1Q8WVP7 490 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 ATP6V1G3Q96LB4 118 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 RNPC3Q96LT9 517 aaKnown RBP18.41■□□□□ 0.54
LIN54-204ENST00000505397 HSD17B14Q9BPX1 270 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 HOMER2Q9NSB8 354 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 CCDC188H7C350 402 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 CEP104O60308 925 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 H2AFZP0C0S5 128 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 FERP16591 822 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 SETQ01105 290 aaPredicted RBP18.41■□□□□ 0.54
LIN54-204ENST00000505397 CYP4A11Q02928 519 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 H2AFVQ71UI9 128 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 SYT17Q9BSW7 474 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 FAM169AQ9Y6X4 670 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 PHIPQ8WWQ0 1821 aa18.41■□□□□ 0.54
LIN54-204ENST00000505397 NFIBO00712 420 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 TBCAO75347 108 aaKnown RBP18.4■□□□□ 0.54
LIN54-204ENST00000505397 CEP55Q53EZ4 464 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 NT5DC3Q86UY8 548 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 VPS36Q86VN1 386 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 PACS2Q86VP3 889 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 HES6Q96HZ4 224 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 NOC2LQ9Y3T9 749 aaKnown RBP18.4■□□□□ 0.54
LIN54-204ENST00000505397 HMGB1P1B2RPK0 211 aaPredicted RBP18.4■□□□□ 0.54
LIN54-204ENST00000505397 C19orf81C9J6K1 198 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 H0YGN5 161 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 CLIC2O15247 247 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 SART1O43290 800 aaKnown RBP18.4■□□□□ 0.54
LIN54-204ENST00000505397 HMGCS2P54868 508 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 PRKG1Q13976 671 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 SKIDA1Q1XH10 827 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 LRCH2Q5VUJ6 765 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 TCERG1LQ5VWI1 586 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 GJB7Q6PEY0 223 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 TADA2BQ86TJ2 420 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 TMBIM4Q9HC24 238 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 RGL1Q9NZL6 768 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 PLAAQ9Y263 795 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 NFS1Q9Y697 457 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 SSC5DA1L4H1 1573 aa18.4■□□□□ 0.54
LIN54-204ENST00000505397 ATXN2Q99700 1313 aaKnown RBP18.4■□□□□ 0.54
LIN54-204ENST00000505397 C1orf186Q6ZWK4 172 aa18.39■□□□□ 0.53
LIN54-204ENST00000505397 SYCE1Q8N0S2 351 aa18.39■□□□□ 0.53
LIN54-204ENST00000505397 SEC14L1Q92503 715 aa18.39■□□□□ 0.53
LIN54-204ENST00000505397 DCPSQ96C86 337 aaKnown RBP18.39■□□□□ 0.53
LIN54-204ENST00000505397 SYT11Q9BT88 431 aa18.39■□□□□ 0.53
LIN54-204ENST00000505397 TUFT1Q9NNX1 390 aa18.39■□□□□ 0.53
LIN54-204ENST00000505397 NR1D1P20393 614 aa18.39■□□□□ 0.53
LIN54-204ENST00000505397 ATP1A2P50993 1020 aa18.39■□□□□ 0.53
LIN54-204ENST00000505397 ITGB3BPQ13352 177 aaPredicted RBP18.39■□□□□ 0.53
LIN54-204ENST00000505397 PEX26Q7Z412 305 aa18.39■□□□□ 0.53
LIN54-204ENST00000505397 LNX1Q8TBB1 728 aaPredicted RBP18.39■□□□□ 0.53
LIN54-204ENST00000505397 CLEC4DQ8WXI8 215 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 314.8 ms