RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 SPIRE2Q8WWL2 714 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 SMARCE1Q969G3 411 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 NFKBIZQ9BYH8 718 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 POLR3FQ9H1D9 316 aaPredicted RBP11.35□□□□□ -0.59
RFC1-210ENST00000505077 SUGCTQ9HAC7 445 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 EXOC1Q9NV70 894 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 PANK4Q9NVE7 773 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 ANK1P16157 1881 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 TRIP11Q15643 1979 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 UBE4BO95155 1302 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 M0QZ92 97 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 B4GALT4O60513 344 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 RHOBTB3O94955 611 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 CD4P01730 458 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 PHKA2P46019 1235 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 EFNA5P52803 228 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 EHHADHQ08426 723 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 PSMD2Q13200 908 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 HIC1Q14526 733 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 ODR4Q5SWX8 454 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 DYMQ7RTS9 669 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 GRAMD1CQ8IYS0 662 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 KIAA0319LQ8IZA0 1049 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 LRRC71Q8N4P6 559 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 PRPF31Q8WWY3 499 aaKnown RBP11.34□□□□□ -0.59
RFC1-210ENST00000505077 STAMQ92783 540 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 HVCN1Q96D96 273 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 CTAGE1Q96RT6 745 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 NTPCRQ9BSD7 190 aaKnown RBP11.34□□□□□ -0.59
RFC1-210ENST00000505077 C2orf40Q9H1Z8 148 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 BLZF1Q9H2G9 400 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 ST6GALNAC4Q9H4F1 302 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 TRMT13Q9NUP7 481 aaKnown RBP11.34□□□□□ -0.59
RFC1-210ENST00000505077 KIAA1468Q9P260 1216 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 SUCLA2Q9P2R7 463 aaPredicted RBP11.34□□□□□ -0.59
RFC1-210ENST00000505077 AKT3Q9Y243 479 aa11.34□□□□□ -0.59
RFC1-210ENST00000505077 KLRC4O43908 158 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 PQBP1O60828 265 aaKnown RBP11.33□□□□□ -0.6
RFC1-210ENST00000505077 PARNO95453 639 aaKnown RBP11.33□□□□□ -0.6
RFC1-210ENST00000505077 PRR29P0C7W0 189 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 IDEP14735 1019 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 EN2P19622 333 aaPredicted RBP11.33□□□□□ -0.6
RFC1-210ENST00000505077 GLRA2P23416 452 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 PPP1R2P41236 205 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 SARSP49591 514 aaKnown RBP11.33□□□□□ -0.6
RFC1-210ENST00000505077 GPC3P51654 580 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 CLCN3P51790 818 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 NCKAP1LP55160 1127 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 MRPS6P82932 125 aaKnown RBP11.33□□□□□ -0.6
RFC1-210ENST00000505077 RAD51AP2Q09MP3 1159 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 LAMTOR4Q0VGL1 99 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 COASYQ13057 564 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 BFSP2Q13515 415 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 CAMK4Q16566 473 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 FAM26FQ5R3K3 315 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 CDCA2Q69YH5 1023 aaPredicted RBP11.33□□□□□ -0.6
RFC1-210ENST00000505077 CAVIN1Q6NZI2 390 aaKnown RBP11.33□□□□□ -0.6
RFC1-210ENST00000505077 RUFY4Q6ZNE9 571 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 RHPN2Q8IUC4 686 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 FAM178BQ8IXR5 827 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 MYCT1Q8N699 235 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 TMEM143Q96AN5 459 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 HTATIP2Q9BUP3 242 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 GPRC5CQ9NQ84 441 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 TMEM63CQ9P1W3 806 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 PCDHA5Q9Y5H7 936 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 SQORQ9Y6N5 450 aa11.33□□□□□ -0.6
RFC1-210ENST00000505077 TDRD15B5MCY1 1934 aaKnown RBP11.33□□□□□ -0.6
RFC1-210ENST00000505077 NPHP3-ACAD11A0A0J9YXS1 232 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 RSPH10B2B2RC85 870 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 EIF3DO15371 548 aaKnown RBP eCLIP11.32□□□□□ -0.6
RFC1-210ENST00000505077 KIF20AO95235 890 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 CLTBP09497 229 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 RSPH10BP0C881 870 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 NPTX2P47972 431 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 ATN1P54259 1190 aaPredicted RBP11.32□□□□□ -0.6
RFC1-210ENST00000505077 PEX3P56589 373 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 ZNF200P98182 395 aaPredicted RBP11.32□□□□□ -0.6
RFC1-210ENST00000505077 TLE2Q04725 743 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 DRP2Q13474 957 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 CAPSQ13938 189 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 TRIM60Q495X7 471 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 COBLL1Q53SF7 1204 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 HERC4Q5GLZ8 1057 aaPredicted RBP11.32□□□□□ -0.6
RFC1-210ENST00000505077 FAM26DQ5JW98 314 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 MAEAQ7L5Y9 396 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 SRGAP1Q7Z6B7 1085 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 SFR1Q86XK3 245 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 ZBTB8OSQ8IWT0 167 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 USP38Q8NB14 1042 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 DEPTORQ8TB45 409 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 DNAJB3Q8WWF6 145 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 SCLT1Q96NL6 688 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 ANP32EQ9BTT0 268 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 INO80BQ9C086 356 aaPredicted RBP11.32□□□□□ -0.6
RFC1-210ENST00000505077 FAM49AQ9H0Q0 323 aaPredicted RBP11.32□□□□□ -0.6
RFC1-210ENST00000505077 TRPV6Q9H1D0 765 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 ZHX3Q9H4I2 956 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 MRPL44Q9H9J2 332 aaKnown RBP11.32□□□□□ -0.6
RFC1-210ENST00000505077 KMT5AQ9NQR1 393 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms