RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 DZANK1Q9NVP4 752 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 FBXL21Q9UKT6 434 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 SAMM50Q9Y512 469 aa18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 MYH9P35579 1960 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-213ENST00000505074 NID2Q14112 1375 aa18.1■□□□□ 0.49
PDLIM7-213ENST00000505074 IGLV3-22A0A075B6J6 115 aa18.1■□□□□ 0.49
PDLIM7-213ENST00000505074 CYP3A4P08684 503 aa18.1■□□□□ 0.49
PDLIM7-213ENST00000505074 PBX3P40426 434 aa18.1■□□□□ 0.49
PDLIM7-213ENST00000505074 TDGQ13569 410 aa18.1■□□□□ 0.49
PDLIM7-213ENST00000505074 C12orf76Q8N812 135 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-213ENST00000505074 TMEM87AQ8NBN3 555 aa18.1■□□□□ 0.49
PDLIM7-213ENST00000505074 CASD1Q96PB1 797 aa18.1■□□□□ 0.49
PDLIM7-213ENST00000505074 NCOA5Q9HCD5 579 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-213ENST00000505074 TBC1D22BQ9NU19 505 aa18.1■□□□□ 0.49
PDLIM7-213ENST00000505074 VPS54Q9P1Q0 977 aa18.1■□□□□ 0.49
PDLIM7-213ENST00000505074 EP300Q09472 2414 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-213ENST00000505074 COL1A2P08123 1366 aa18.09■□□□□ 0.49
PDLIM7-213ENST00000505074 IGKV6D-21A0A0A0MT36 114 aa18.09■□□□□ 0.49
PDLIM7-213ENST00000505074 ADAMTS3O15072 1205 aa18.09■□□□□ 0.49
PDLIM7-213ENST00000505074 ZNF484Q5JVG2 852 aa18.09■□□□□ 0.49
PDLIM7-213ENST00000505074 HINFPQ9BQA5 517 aa18.09■□□□□ 0.49
PDLIM7-213ENST00000505074 RNF26Q9BY78 433 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-213ENST00000505074 STK25O00506 426 aa18.08■□□□□ 0.48
PDLIM7-213ENST00000505074 KRT37O76014 449 aa18.08■□□□□ 0.48
PDLIM7-213ENST00000505074 CXCL14O95715 111 aa18.08■□□□□ 0.48
PDLIM7-213ENST00000505074 PSAPP07602 524 aa18.08■□□□□ 0.48
PDLIM7-213ENST00000505074 CRYBB1P53674 252 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-213ENST00000505074 NLRP5P59047 1200 aa18.08■□□□□ 0.48
PDLIM7-213ENST00000505074 ZNF746Q6NUN9 644 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-213ENST00000505074 TRIM22Q8IYM9 498 aa18.08■□□□□ 0.48
PDLIM7-213ENST00000505074 KIAA0319LQ8IZA0 1049 aa18.08■□□□□ 0.48
PDLIM7-213ENST00000505074 SIX5Q8N196 739 aa18.08■□□□□ 0.48
PDLIM7-213ENST00000505074 SLC39A11Q8N1S5 342 aa18.08■□□□□ 0.48
PDLIM7-213ENST00000505074 METTL13Q8N6R0 699 aa18.08■□□□□ 0.48
PDLIM7-213ENST00000505074 DUSP12Q9UNI6 340 aa18.08■□□□□ 0.48
PDLIM7-213ENST00000505074 DMXL1Q9Y485 3027 aa18.07■□□□□ 0.48
PDLIM7-213ENST00000505074 CPLX1O14810 134 aa18.07■□□□□ 0.48
PDLIM7-213ENST00000505074 DHX15O43143 795 aaKnown RBP18.07■□□□□ 0.48
PDLIM7-213ENST00000505074 IFNAR1P17181 557 aa18.07■□□□□ 0.48
PDLIM7-213ENST00000505074 PDIA3P30101 505 aaKnown RBP18.07■□□□□ 0.48
PDLIM7-213ENST00000505074 DSC3Q14574 896 aa18.07■□□□□ 0.48
PDLIM7-213ENST00000505074 KANK3Q6NY19 840 aa18.07■□□□□ 0.48
PDLIM7-213ENST00000505074 OTOP3Q7RTS5 596 aa18.07■□□□□ 0.48
PDLIM7-213ENST00000505074 FAM228AQ86W67 206 aa18.07■□□□□ 0.48
PDLIM7-213ENST00000505074 SMAP1Q8IYB5 467 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-213ENST00000505074 CRYGNQ8WXF5 182 aa18.07■□□□□ 0.48
PDLIM7-213ENST00000505074 BBXQ8WY36 941 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-213ENST00000505074 OSMRQ99650 979 aa18.07■□□□□ 0.48
PDLIM7-213ENST00000505074 GABBR1Q9UBS5 961 aa18.07■□□□□ 0.48
PDLIM7-213ENST00000505074 R4GN57 208 aa18.07■□□□□ 0.48
PDLIM7-213ENST00000505074 FANCMQ8IYD8 2048 aa18.06■□□□□ 0.48
PDLIM7-213ENST00000505074 CHMP2AO43633 222 aa18.06■□□□□ 0.48
PDLIM7-213ENST00000505074 RFX1P22670 979 aa18.06■□□□□ 0.48
PDLIM7-213ENST00000505074 SSRP1Q08945 709 aaKnown RBP18.06■□□□□ 0.48
PDLIM7-213ENST00000505074 KIZQ2M2Z5 673 aa18.06■□□□□ 0.48
PDLIM7-213ENST00000505074 CCDC149Q6ZUS6 474 aa18.06■□□□□ 0.48
PDLIM7-213ENST00000505074 RUFY3Q7L099 469 aa18.06■□□□□ 0.48
PDLIM7-213ENST00000505074 FBXL16Q8N461 479 aa18.06■□□□□ 0.48
PDLIM7-213ENST00000505074 CNTNAP3BQ96NU0 1288 aa18.06■□□□□ 0.48
PDLIM7-213ENST00000505074 AGXT2Q9BYV1 514 aa18.06■□□□□ 0.48
PDLIM7-213ENST00000505074 CNTNAP3Q9BZ76 1288 aa18.06■□□□□ 0.48
PDLIM7-213ENST00000505074 RNF19AQ9NV58 838 aa18.06■□□□□ 0.48
PDLIM7-213ENST00000505074 PCDHA10Q9Y5I2 948 aa18.06■□□□□ 0.48
PDLIM7-213ENST00000505074 CYP46A1Q9Y6A2 500 aa18.06■□□□□ 0.48
PDLIM7-213ENST00000505074 C2orf16Q68DN1 1984 aa18.06■□□□□ 0.48
PDLIM7-213ENST00000505074 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 WDR64B1ANS9 1081 aa18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 VTNP04004 478 aa18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 NEFLP07196 543 aa18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 ZSCAN20P17040 1043 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 ATP4AP20648 1035 aa18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 ALDH7A1P49419 539 aaKnown RBP18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 STK3Q13188 491 aa18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 GIT2Q14161 759 aa18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 NTRK3Q16288 839 aa18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 ZC3H14Q6PJT7 736 aaKnown RBP18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 TMC5Q6UXY8 1006 aa18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 CABP7Q86V35 215 aa18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 RUBCNQ92622 972 aa18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 TMEM169Q96HH4 297 aa18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 LARP6Q9BRS8 491 aaKnown RBP18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 KCNK12Q9HB15 430 aa18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 DLL3Q9NYJ7 618 aa18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 CEP131Q9UPN4 1083 aa18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 AKT3Q9Y243 479 aa18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 WDR87Q6ZQQ6 2873 aa18.05■□□□□ 0.48
PDLIM7-213ENST00000505074 WDR81Q562E7 1941 aa18.04■□□□□ 0.48
PDLIM7-213ENST00000505074 SPDYE4A6NLX3 237 aa18.04■□□□□ 0.48
PDLIM7-213ENST00000505074 GAS7O60861 476 aa18.04■□□□□ 0.48
PDLIM7-213ENST00000505074 C22orf31O95567 290 aa18.04■□□□□ 0.48
PDLIM7-213ENST00000505074 EPCAMP16422 314 aa18.04■□□□□ 0.48
PDLIM7-213ENST00000505074 CLCN3P51790 818 aa18.04■□□□□ 0.48
PDLIM7-213ENST00000505074 CPLX2Q6PUV4 134 aaKnown RBP18.04■□□□□ 0.48
PDLIM7-213ENST00000505074 ECHDC2Q86YB7 292 aa18.04■□□□□ 0.48
PDLIM7-213ENST00000505074 VPS52Q8N1B4 723 aa18.04■□□□□ 0.48
PDLIM7-213ENST00000505074 RNF169Q8NCN4 708 aa18.04■□□□□ 0.48
PDLIM7-213ENST00000505074 FAM167AQ96KS9 214 aa18.04■□□□□ 0.48
PDLIM7-213ENST00000505074 SCLT1Q96NL6 688 aa18.04■□□□□ 0.48
PDLIM7-213ENST00000505074 MAP7D2Q96T17 732 aa18.04■□□□□ 0.48
PDLIM7-213ENST00000505074 IGSF9Q9P2J2 1179 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms