RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 TSHRP16473 764 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 KRT15P19012 456 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 NOP2P46087 812 aaKnown RBP5.87□□□□□ -1.47
NIPBL-204ENST00000504430 CLCN2P51788 898 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 NRG1Q02297 640 aaPredicted RBP5.87□□□□□ -1.47
NIPBL-204ENST00000504430 ARL13BQ3SXY8 428 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 TTLL7Q6ZT98 887 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 ZER1Q7Z7L7 766 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 SDCCAG8Q86SQ7 713 aaPredicted RBP5.87□□□□□ -1.47
NIPBL-204ENST00000504430 IL17RDQ8NFM7 739 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 NEK9Q8TD19 979 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 RTF1Q92541 710 aaKnown RBP5.87□□□□□ -1.47
NIPBL-204ENST00000504430 KIF1BPQ96EK5 621 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 MAELQ96JY0 434 aaKnown RBP5.87□□□□□ -1.47
NIPBL-204ENST00000504430 TOMM22Q9NS69 142 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 FBXL7Q9UJT9 491 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 PCOLCE2Q9UKZ9 415 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 B4E1Z4 1266 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 RRP9O43818 475 aaKnown RBP5.86□□□□□ -1.47
NIPBL-204ENST00000504430 CCDC175P0C221 793 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 MAPTP10636 758 aaKnown RBP5.86□□□□□ -1.47
NIPBL-204ENST00000504430 BTF3P20290 206 aaKnown RBP5.86□□□□□ -1.47
NIPBL-204ENST00000504430 PRPHP41219 470 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 PPP5CP53041 499 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 ERV3-1Q14264 604 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 CLEC16AQ2KHT3 1053 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 C3orf36Q3SXR2 165 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 TMEM201Q5SNT2 666 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 APOA5Q6Q788 366 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 USP45Q70EL2 814 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 CYFIP1Q7L576 1253 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 KREMEN2Q8NCW0 462 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 GSDMBQ8TAX9 411 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 LRTOMTQ8WZ04 291 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 TRIM11Q96F44 468 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 ALG1Q9BT22 464 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 KIAA1683Q9H0B3 1180 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 TMEM60Q9H2L4 133 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 NKX2-4Q9H2Z4 354 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 TMEM51Q9NW97 253 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 KIF17Q9P2E2 1029 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 LAMP5Q9UJQ1 280 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 DENND2AQ9ULE3 1009 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 C2CD2Q9Y426 696 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 SPATA31C2B4DYI2 1134 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 DVL2O14641 736 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 MUSKO15146 869 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 ST18O60284 1047 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 KLHL41O60662 606 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 MAFO75444 373 aaPredicted RBP5.86□□□□□ -1.47
NIPBL-204ENST00000504430 CSPG5O95196 566 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 THBDP07204 575 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 SEC24CP53992 1094 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 CREMQ03060 361 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 KCNB1Q14721 858 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 METTL24Q5JXM2 366 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 DGKKQ5KSL6 1271 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 TBC1D21Q8IYX1 336 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 FIBCD1Q8N539 461 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 ARL8AQ96BM9 186 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 TRPV4Q9HBA0 871 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 OBP2BQ9NPH6 170 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 WASH6PQ9NQA3 447 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 WHRNQ9P202 907 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 CFDP1Q9UEE9 299 aaPredicted RBP5.86□□□□□ -1.47
NIPBL-204ENST00000504430 VPS28Q9UK41 221 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 ATP6V0A2Q9Y487 856 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 FAM234BA2RU67 622 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 RGS13O14921 159 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 ATXN7O15265 892 aaPredicted RBP5.86□□□□□ -1.47
NIPBL-204ENST00000504430 EFSO43281 561 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 DLGAP3O95886 979 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 HRGP04196 525 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 MECP2P51608 486 aaKnown RBP5.86□□□□□ -1.47
NIPBL-204ENST00000504430 NLRP12P59046 1061 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 PLCL1Q15111 1095 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 FAM110CQ1W6H9 321 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 DIEXFQ68CQ4 756 aaKnown RBP5.86□□□□□ -1.47
NIPBL-204ENST00000504430 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.86□□□□□ -1.47
NIPBL-204ENST00000504430 OVCH1Q7RTY7 1134 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 KIAA0319LQ8IZA0 1049 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 ZNF845Q96IR2 970 aaPredicted RBP5.86□□□□□ -1.47
NIPBL-204ENST00000504430 IPPKQ9H8X2 491 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 CACNA2D2Q9NY47 1150 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 HOXC10Q9NYD6 342 aa5.86□□□□□ -1.47
NIPBL-204ENST00000504430 MTF2Q9Y483 593 aaPredicted RBP5.86□□□□□ -1.47
NIPBL-204ENST00000504430 ERAL1O75616 437 aaKnown RBP5.85□□□□□ -1.47
NIPBL-204ENST00000504430 PGM3O95394 542 aa5.85□□□□□ -1.47
NIPBL-204ENST00000504430 CD2BP2O95400 341 aaKnown RBP5.85□□□□□ -1.47
NIPBL-204ENST00000504430 XBP1P17861 261 aa5.85□□□□□ -1.47
NIPBL-204ENST00000504430 PAX7P23759 505 aa5.85□□□□□ -1.47
NIPBL-204ENST00000504430 HOXC12P31275 282 aa5.85□□□□□ -1.47
NIPBL-204ENST00000504430 AUHQ13825 339 aaKnown RBP5.85□□□□□ -1.47
NIPBL-204ENST00000504430 LINC00528Q8N1L1 170 aa5.85□□□□□ -1.47
NIPBL-204ENST00000504430 ANKLE1Q8NAG6 615 aa5.85□□□□□ -1.47
NIPBL-204ENST00000504430 CEP95Q96GE4 821 aa5.85□□□□□ -1.47
NIPBL-204ENST00000504430 LIN28AQ9H9Z2 209 aaKnown RBP5.85□□□□□ -1.47
NIPBL-204ENST00000504430 XAB2Q9HCS7 855 aaKnown RBP5.85□□□□□ -1.47
NIPBL-204ENST00000504430 PRDM6Q9NQX0 595 aa5.85□□□□□ -1.47
NIPBL-204ENST00000504430 PICK1Q9NRD5 415 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms