RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 RESP18Q5W5W9 173 aa6.48□□□□□ -1.37
LINC02397-201ENST00000504409 STRA8Q7Z7C7 330 aa6.48□□□□□ -1.37
LINC02397-201ENST00000504409 MYCBPAPQ8TBZ2 947 aa6.48□□□□□ -1.37
LINC02397-201ENST00000504409 EZH1Q92800 747 aaPredicted RBP6.48□□□□□ -1.37
LINC02397-201ENST00000504409 TSR2Q969E8 191 aaKnown RBP6.48□□□□□ -1.37
LINC02397-201ENST00000504409 MS4A14Q96JA4 679 aa6.48□□□□□ -1.37
LINC02397-201ENST00000504409 OSBPL10Q9BXB5 764 aa6.48□□□□□ -1.37
LINC02397-201ENST00000504409 TRIM45Q9H8W5 580 aaPredicted RBP6.48□□□□□ -1.37
LINC02397-201ENST00000504409 PRDM16Q9HAZ2 1276 aa6.48□□□□□ -1.37
LINC02397-201ENST00000504409 FBXL5Q9UKA1 691 aa6.48□□□□□ -1.37
LINC02397-201ENST00000504409 TLDC2A0PJX2 215 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 EXOC3O60645 756 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 ANP32DO95626 131 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 PFKFB1P16118 471 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 IGHMBP2P38935 993 aaKnown RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 BFSP2Q13515 415 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 RABL6Q3YEC7 729 aaPredicted RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 SIX6OS1Q8N1H7 587 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 SLC35F6Q8N357 371 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 SPDYE1Q8NFV5 336 aaPredicted RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 LRRC39Q96DD0 335 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 ADGRB2O60241 1585 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 SNTNA6NMZ2 147 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 PTPN4P29074 926 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 PDZD8Q8NEN9 1154 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 PGM2Q96G03 612 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 MAP3K20Q9NYL2 800 aaKnown RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 L1RE1Q9UN81 338 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 FAM47DPA6NHR8 397 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 IDH1O75874 414 aaKnown RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 SERPINB9P50453 376 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 ATP1A2P50993 1020 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 ITGA1P56199 1179 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 TRIM72Q6ZMU5 477 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 ZNF555Q8NEP9 628 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 SNF8Q96H20 258 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 PARVAQ9NVD7 372 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 USP42Q9H9J4 1324 aaKnown RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 A0A1B0GTH6 734 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 HMOX1P09601 288 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 NAIF1Q69YI7 327 aaPredicted RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 RAB44Q7Z6P3 723 aaPredicted RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 TMEM237Q96Q45 408 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 COQ7Q99807 217 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 PAG1Q9NWQ8 432 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 TYW5A2RUC4 315 aaKnown RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 KPNA3O00505 521 aaPredicted RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 NFKBIAP25963 317 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 IFIT1BQ5T764 474 aaKnown RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 ENOSF1Q7L5Y1 443 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 SLC24A3Q9HC58 644 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 CDY2AQ9Y6F7 541 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 CDY1Q9Y6F8 540 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 MYH8P13535 1937 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 EXOC1LA0A1B0GW35 172 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 PYGLP06737 847 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 LACTB2Q53H82 288 aaPredicted RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 CCNI2Q6ZMN8 369 aaPredicted RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 EPB41L5Q9HCM4 733 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 RAB20Q9NX57 234 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 A0A087WXM4 84 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 SMARCA5O60264 1052 aaPredicted RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 POLD1P28340 1107 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 TOP3AQ13472 1001 aaPredicted RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 MTHFD1LQ6UB35 978 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 ZNF354CQ86Y25 554 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 ZKSCAN4Q969J2 545 aaPredicted RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 ING2Q9H160 280 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 EXOC6BQ9Y2D4 811 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 NLRP1Q9C000 1473 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 ARID3CA6NKF2 412 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 POLR2DO15514 142 aaKnown RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 ITIH2P19823 946 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 IBSPP21815 317 aaPredicted RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 FKBP3Q00688 224 aaKnown RBP6.47□□□□□ -1.37
LINC02397-201ENST00000504409 ARMC3Q5W041 872 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 HAUS6Q7Z4H7 955 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 PDIK1LQ8N165 341 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 USHBP1Q8N6Y0 703 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 RNF169Q8NCN4 708 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 MBIPQ9NS73 344 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 ATG3Q9NT62 314 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 WDR35Q9P2L0 1181 aa6.47□□□□□ -1.37
LINC02397-201ENST00000504409 ERP29P30040 261 aaKnown RBP6.46□□□□□ -1.37
LINC02397-201ENST00000504409 RNASE9P60153 205 aaKnown RBP6.46□□□□□ -1.37
LINC02397-201ENST00000504409 BLMHQ13867 455 aa6.46□□□□□ -1.37
LINC02397-201ENST00000504409 ARHGEF6Q15052 776 aa6.46□□□□□ -1.37
LINC02397-201ENST00000504409 E2F5Q15329 346 aa6.46□□□□□ -1.37
LINC02397-201ENST00000504409 PAPD7Q5XG87 772 aaKnown RBP6.46□□□□□ -1.37
LINC02397-201ENST00000504409 PIK3C3Q8NEB9 887 aa6.46□□□□□ -1.37
LINC02397-201ENST00000504409 GDPD2Q9HCC8 539 aa6.46□□□□□ -1.37
LINC02397-201ENST00000504409 CCDC59Q9P031 241 aaKnown RBP6.46□□□□□ -1.37
LINC02397-201ENST00000504409 SNX12Q9UMY4 172 aa6.46□□□□□ -1.37
LINC02397-201ENST00000504409 LGALS16A8MUM7 142 aa6.46□□□□□ -1.37
LINC02397-201ENST00000504409 TSHRP16473 764 aa6.46□□□□□ -1.37
LINC02397-201ENST00000504409 TBC1D9BQ66K14 1250 aa6.46□□□□□ -1.37
LINC02397-201ENST00000504409 TRIM74Q86UV6 250 aa6.46□□□□□ -1.37
LINC02397-201ENST00000504409 TRIM73Q86UV7 250 aa6.46□□□□□ -1.37
LINC02397-201ENST00000504409 SVOPQ8N4V2 548 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms