RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 SCLT1Q96NL6 688 aa15.28■□□□□ 0.04
HOXC6-203ENST00000504315 UPF2Q9HAU5 1272 aaKnown RBP15.28■□□□□ 0.04
HOXC6-203ENST00000504315 ATP6V0A4Q9HBG4 840 aa15.28■□□□□ 0.04
HOXC6-203ENST00000504315 XPNPEP1Q9NQW7 623 aa15.28■□□□□ 0.04
HOXC6-203ENST00000504315 ANKEF1Q9NU02 776 aa15.28■□□□□ 0.04
HOXC6-203ENST00000504315 COL4A3BPQ9Y5P4 624 aa15.28■□□□□ 0.04
HOXC6-203ENST00000504315 BDP1A6H8Y1 2624 aa15.28■□□□□ 0.04
HOXC6-203ENST00000504315 TBKBP1A7MCY6 615 aa15.27■□□□□ 0.04
HOXC6-203ENST00000504315 ZBTB39O15060 712 aa15.27■□□□□ 0.04
HOXC6-203ENST00000504315 HOXA2O43364 376 aa15.27■□□□□ 0.04
HOXC6-203ENST00000504315 CSDE1O75534 798 aaKnown RBP15.27■□□□□ 0.04
HOXC6-203ENST00000504315 CD2BP2O95400 341 aaKnown RBP15.27■□□□□ 0.04
HOXC6-203ENST00000504315 ITGB1P05556 798 aa15.27■□□□□ 0.04
HOXC6-203ENST00000504315 FGFR1P11362 822 aa15.27■□□□□ 0.04
HOXC6-203ENST00000504315 ATF7P17544 494 aaPredicted RBP15.27■□□□□ 0.04
HOXC6-203ENST00000504315 FGFR4P22455 802 aa15.27■□□□□ 0.04
HOXC6-203ENST00000504315 EMC2Q15006 297 aa15.27■□□□□ 0.04
HOXC6-203ENST00000504315 XKR9Q5GH70 373 aa15.27■□□□□ 0.04
HOXC6-203ENST00000504315 TCEAL5Q5H9L2 206 aa15.27■□□□□ 0.04
HOXC6-203ENST00000504315 KSR1Q8IVT5 923 aa15.27■□□□□ 0.04
HOXC6-203ENST00000504315 ADAMTS19Q8TE59 1207 aa15.27■□□□□ 0.04
HOXC6-203ENST00000504315 TCP11Q8WWU5 503 aa15.27■□□□□ 0.04
HOXC6-203ENST00000504315 PSPC1Q8WXF1 523 aaKnown RBP15.27■□□□□ 0.04
HOXC6-203ENST00000504315 NLRP4Q96MN2 994 aa15.27■□□□□ 0.04
HOXC6-203ENST00000504315 CASD1Q96PB1 797 aa15.27■□□□□ 0.04
HOXC6-203ENST00000504315 MTRQ99707 1265 aa15.27■□□□□ 0.04
HOXC6-203ENST00000504315 TMEM117Q9H0C3 514 aa15.27■□□□□ 0.04
HOXC6-203ENST00000504315 UBE2ZQ9H832 354 aaPredicted RBP15.27■□□□□ 0.04
HOXC6-203ENST00000504315 ASAP2O43150 1006 aa15.26■□□□□ 0.03
HOXC6-203ENST00000504315 DGAT1O75907 488 aa15.26■□□□□ 0.03
HOXC6-203ENST00000504315 EOMESO95936 686 aa15.26■□□□□ 0.03
HOXC6-203ENST00000504315 OR52Z1P0C646 297 aa15.26■□□□□ 0.03
HOXC6-203ENST00000504315 SPATA31C1P0DKV0 1188 aa15.26■□□□□ 0.03
HOXC6-203ENST00000504315 XRCC6P12956 609 aaKnown RBP eCLIP15.26■□□□□ 0.03
HOXC6-203ENST00000504315 RARRES1P49788 294 aa15.26■□□□□ 0.03
HOXC6-203ENST00000504315 KCNQ1P51787 676 aa15.26■□□□□ 0.03
HOXC6-203ENST00000504315 TTC38Q5R3I4 469 aa15.26■□□□□ 0.03
HOXC6-203ENST00000504315 SRGAP1Q7Z6B7 1085 aa15.26■□□□□ 0.03
HOXC6-203ENST00000504315 FERMT3Q86UX7 667 aa15.26■□□□□ 0.03
HOXC6-203ENST00000504315 KLHL23Q8NBE8 558 aa15.26■□□□□ 0.03
HOXC6-203ENST00000504315 SPPL3Q8TCT6 385 aa15.26■□□□□ 0.03
HOXC6-203ENST00000504315 PRPF31Q8WWY3 499 aaKnown RBP15.26■□□□□ 0.03
HOXC6-203ENST00000504315 RSPH1Q8WYR4 309 aa15.26■□□□□ 0.03
HOXC6-203ENST00000504315 TMEM143Q96AN5 459 aa15.26■□□□□ 0.03
HOXC6-203ENST00000504315 TMX3Q96JJ7 454 aa15.26■□□□□ 0.03
HOXC6-203ENST00000504315 CWH43Q9H720 699 aa15.26■□□□□ 0.03
HOXC6-203ENST00000504315 TUFT1Q9NNX1 390 aa15.26■□□□□ 0.03
HOXC6-203ENST00000504315 ATP2B1P20020 1258 aa15.25■□□□□ 0.03
HOXC6-203ENST00000504315 MCM2P49736 904 aa15.25■□□□□ 0.03
HOXC6-203ENST00000504315 TOB1P50616 345 aaPredicted RBP15.25■□□□□ 0.03
HOXC6-203ENST00000504315 UBE3AQ05086 875 aa15.25■□□□□ 0.03
HOXC6-203ENST00000504315 POU5F1BQ06416 359 aa15.25■□□□□ 0.03
HOXC6-203ENST00000504315 LAMTOR4Q0VGL1 99 aa15.25■□□□□ 0.03
HOXC6-203ENST00000504315 ZNF174Q15697 407 aa15.25■□□□□ 0.03
HOXC6-203ENST00000504315 CSPP1Q1MSJ5 1256 aa15.25■□□□□ 0.03
HOXC6-203ENST00000504315 LEXMQ3ZCV2 418 aa15.25■□□□□ 0.03
HOXC6-203ENST00000504315 LRRC55Q6ZSA7 311 aa15.25■□□□□ 0.03
HOXC6-203ENST00000504315 IFNLR1Q8IU57 520 aaPredicted RBP15.25■□□□□ 0.03
HOXC6-203ENST00000504315 C4orf32Q8N8J7 132 aa15.25■□□□□ 0.03
HOXC6-203ENST00000504315 PABPC5Q96DU9 382 aaKnown RBP15.25■□□□□ 0.03
HOXC6-203ENST00000504315 POLR3CQ9BUI4 534 aaPredicted RBP15.25■□□□□ 0.03
HOXC6-203ENST00000504315 ALG13Q9NP73 1137 aaKnown RBP15.25■□□□□ 0.03
HOXC6-203ENST00000504315 AAASQ9NRG9 546 aa15.25■□□□□ 0.03
HOXC6-203ENST00000504315 AGPAT5Q9NUQ2 364 aa15.25■□□□□ 0.03
HOXC6-203ENST00000504315 TYW1Q9NV66 732 aaKnown RBP15.25■□□□□ 0.03
HOXC6-203ENST00000504315 HCSTQ9UBK5 93 aa15.25■□□□□ 0.03
HOXC6-203ENST00000504315 KIF3AQ9Y496 699 aa15.25■□□□□ 0.03
HOXC6-203ENST00000504315 NCK2O43639 380 aa15.24■□□□□ 0.03
HOXC6-203ENST00000504315 ZNF623O75123 536 aa15.24■□□□□ 0.03
HOXC6-203ENST00000504315 LAG3P18627 525 aa15.24■□□□□ 0.03
HOXC6-203ENST00000504315 IBSPP21815 317 aaPredicted RBP15.24■□□□□ 0.03
HOXC6-203ENST00000504315 MUTP22033 750 aa15.24■□□□□ 0.03
HOXC6-203ENST00000504315 DNAJB1P25685 340 aa15.24■□□□□ 0.03
HOXC6-203ENST00000504315 RPA1P27694 616 aa15.24■□□□□ 0.03
HOXC6-203ENST00000504315 PHKA2P46019 1235 aa15.24■□□□□ 0.03
HOXC6-203ENST00000504315 MXD4Q14582 209 aaPredicted RBP15.24■□□□□ 0.03
HOXC6-203ENST00000504315 PCBP1Q15365 356 aaKnown RBP eCLIP15.24■□□□□ 0.03
HOXC6-203ENST00000504315 CTC1Q2NKJ3 1217 aa15.24■□□□□ 0.03
HOXC6-203ENST00000504315 CLLU1OSQ5K130 101 aa15.24■□□□□ 0.03
HOXC6-203ENST00000504315 CATSPER3Q86XQ3 398 aa15.24■□□□□ 0.03
HOXC6-203ENST00000504315 LRRC43Q8N309 656 aa15.24■□□□□ 0.03
HOXC6-203ENST00000504315 COLGALT1Q8NBJ5 622 aa15.24■□□□□ 0.03
HOXC6-203ENST00000504315 UHRF1Q96T88 793 aaPredicted RBP15.24■□□□□ 0.03
HOXC6-203ENST00000504315 NFKBIZQ9BYH8 718 aa15.24■□□□□ 0.03
HOXC6-203ENST00000504315 MINDY3Q9H8M7 445 aa15.24■□□□□ 0.03
HOXC6-203ENST00000504315 NOL7Q9UMY1 257 aaKnown RBP15.24■□□□□ 0.03
HOXC6-203ENST00000504315 PCDHB12Q9Y5F1 795 aa15.24■□□□□ 0.03
HOXC6-203ENST00000504315 TNFRSF10AO00220 468 aa15.23■□□□□ 0.03
HOXC6-203ENST00000504315 MED24O75448 989 aa15.23■□□□□ 0.03
HOXC6-203ENST00000504315 SKIP12755 728 aa15.23■□□□□ 0.03
HOXC6-203ENST00000504315 ARL2P36404 184 aa15.23■□□□□ 0.03
HOXC6-203ENST00000504315 TECP42680 631 aa15.23■□□□□ 0.03
HOXC6-203ENST00000504315 FXR2P51116 673 aaKnown RBP eCLIP15.23■□□□□ 0.03
HOXC6-203ENST00000504315 RAB27AP51159 221 aa15.23■□□□□ 0.03
HOXC6-203ENST00000504315 PTENP60484 403 aa15.23■□□□□ 0.03
HOXC6-203ENST00000504315 GNL2Q13823 731 aaKnown RBP15.23■□□□□ 0.03
HOXC6-203ENST00000504315 TWF2Q6IBS0 349 aaKnown RBP15.23■□□□□ 0.03
HOXC6-203ENST00000504315 CATSPER4Q7RTX7 472 aa15.23■□□□□ 0.03
HOXC6-203ENST00000504315 RNF149Q8NC42 400 aa15.23■□□□□ 0.03
HOXC6-203ENST00000504315 PIGOQ8TEQ8 1089 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms