RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 FAM184BQ9ULE4 1060 aa7□□□□□ -1.29
COPS4-203ENST00000504274 NOP58Q9Y2X3 529 aaKnown RBP7□□□□□ -1.29
COPS4-203ENST00000504274 CTDP1Q9Y5B0 961 aaPredicted RBP7□□□□□ -1.29
COPS4-203ENST00000504274 PCDHB6Q9Y5E3 794 aa7□□□□□ -1.29
COPS4-203ENST00000504274 K7ESF4 209 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 LAMTOR5O43504 91 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 ENPP1P22413 925 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 EPHB4P54760 987 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 LGALS4P56470 323 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 PPARAQ07869 468 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 UGT8Q16880 541 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 ZMAT1Q5H9K5 638 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 USP30Q70CQ3 517 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 PLEKHH3Q7Z736 793 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 CBARPQ8N350 705 aaPredicted RBP6.99□□□□□ -1.29
COPS4-203ENST00000504274 CDYL2Q8N8U2 506 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 GAB3Q8WWW8 586 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 HIST1H2AHQ96KK5 128 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 ACAP3Q96P50 834 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 ORAI2Q96SN7 254 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 HIST1H2AJQ99878 128 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 PUS7LQ9H0K6 701 aaKnown RBP6.99□□□□□ -1.29
COPS4-203ENST00000504274 WNT8AQ9H1J5 351 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 MEGF9Q9H1U4 602 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 PPP4R1LQ9P1A2 415 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 PRSS50Q9UI38 385 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 VWA7Q9Y334 891 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 WASHC2CQ9Y4E1 1318 aa6.99□□□□□ -1.29
COPS4-203ENST00000504274 ARHGAP6O43182 974 aa6.98□□□□□ -1.29
COPS4-203ENST00000504274 H2AFYO75367 372 aaKnown RBP6.98□□□□□ -1.29
COPS4-203ENST00000504274 PLATP00750 562 aa6.98□□□□□ -1.29
COPS4-203ENST00000504274 HGFACQ04756 655 aa6.98□□□□□ -1.29
COPS4-203ENST00000504274 FAPQ12884 760 aa6.98□□□□□ -1.29
COPS4-203ENST00000504274 NFYCQ13952 458 aa6.98□□□□□ -1.29
COPS4-203ENST00000504274 NFIXQ14938 502 aa6.98□□□□□ -1.29
COPS4-203ENST00000504274 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.98□□□□□ -1.29
COPS4-203ENST00000504274 CLEC14AQ86T13 490 aa6.98□□□□□ -1.29
COPS4-203ENST00000504274 PPP1R14CQ8TAE6 165 aa6.98□□□□□ -1.29
COPS4-203ENST00000504274 KRTAP9-9Q9BYP9 154 aa6.98□□□□□ -1.29
COPS4-203ENST00000504274 KRTAP9-4Q9BYQ2 154 aa6.98□□□□□ -1.29
COPS4-203ENST00000504274 QRSL1Q9H0R6 528 aaKnown RBP6.98□□□□□ -1.29
COPS4-203ENST00000504274 EVLQ9UI08 416 aaPredicted RBP6.98□□□□□ -1.29
COPS4-203ENST00000504274 SYNPO2Q9UMS6 1093 aa6.98□□□□□ -1.29
COPS4-203ENST00000504274 NR2E1Q9Y466 385 aa6.98□□□□□ -1.29
COPS4-203ENST00000504274 MAFGO15525 162 aa6.97□□□□□ -1.29
COPS4-203ENST00000504274 SEC24DO94855 1032 aaPredicted RBP6.97□□□□□ -1.29
COPS4-203ENST00000504274 IBSPP21815 317 aaPredicted RBP6.97□□□□□ -1.29
COPS4-203ENST00000504274 IARSP41252 1262 aaKnown RBP6.97□□□□□ -1.29
COPS4-203ENST00000504274 CTSWP56202 376 aa6.97□□□□□ -1.29
COPS4-203ENST00000504274 ATP2C1P98194 919 aaPredicted RBP6.97□□□□□ -1.29
COPS4-203ENST00000504274 SRSF2Q01130 221 aaKnown RBP6.97□□□□□ -1.29
COPS4-203ENST00000504274 CD69Q07108 199 aa6.97□□□□□ -1.29
COPS4-203ENST00000504274 INAVAQ3KP66 663 aa6.97□□□□□ -1.29
COPS4-203ENST00000504274 LIMS2Q7Z4I7 341 aa6.97□□□□□ -1.29
COPS4-203ENST00000504274 NEIL1Q96FI4 390 aaPredicted RBP6.97□□□□□ -1.29
COPS4-203ENST00000504274 LRRC37BQ96QE4 947 aa6.97□□□□□ -1.29
COPS4-203ENST00000504274 SSBP3Q9BWW4 388 aaPredicted RBP6.97□□□□□ -1.29
COPS4-203ENST00000504274 JADE2Q9NQC1 790 aa6.97□□□□□ -1.29
COPS4-203ENST00000504274 RAPGEFL1Q9UHV5 662 aa6.97□□□□□ -1.29
COPS4-203ENST00000504274 TRHDEQ9UKU6 1024 aa6.97□□□□□ -1.29
COPS4-203ENST00000504274 RBM8AQ9Y5S9 174 aaKnown RBP6.97□□□□□ -1.29
COPS4-203ENST00000504274 ZNF536O15090 1300 aa6.97□□□□□ -1.29
COPS4-203ENST00000504274 hCG_2014768A0A024R1R8 64 aa6.96□□□□□ -1.3
COPS4-203ENST00000504274 GAAP10253 952 aa6.96□□□□□ -1.3
COPS4-203ENST00000504274 ITKQ08881 620 aa6.96□□□□□ -1.3
COPS4-203ENST00000504274 KLF1Q13351 362 aaPredicted RBP6.96□□□□□ -1.3
COPS4-203ENST00000504274 SURF1Q15526 300 aa6.96□□□□□ -1.3
COPS4-203ENST00000504274 TOR2AQ5JU69 321 aa6.96□□□□□ -1.3
COPS4-203ENST00000504274 KCNK18Q7Z418 384 aa6.96□□□□□ -1.3
COPS4-203ENST00000504274 PIK3C3Q8NEB9 887 aa6.96□□□□□ -1.3
COPS4-203ENST00000504274 GFM2Q969S9 779 aaKnown RBP6.96□□□□□ -1.3
COPS4-203ENST00000504274 MTMR8Q96EF0 704 aa6.96□□□□□ -1.3
COPS4-203ENST00000504274 GNRHR2Q96P88 292 aa6.96□□□□□ -1.3
COPS4-203ENST00000504274 LMF1Q96S06 567 aa6.96□□□□□ -1.3
COPS4-203ENST00000504274 RBM15Q96T37 977 aaKnown RBP eCLIP6.96□□□□□ -1.3
COPS4-203ENST00000504274 DPYSL5Q9BPU6 564 aa6.96□□□□□ -1.3
COPS4-203ENST00000504274 MENTQ9BUN1 341 aa6.96□□□□□ -1.3
COPS4-203ENST00000504274 OSBPL6Q9BZF3 934 aa6.96□□□□□ -1.3
COPS4-203ENST00000504274 SEC61A2Q9H9S3 476 aa6.96□□□□□ -1.3
COPS4-203ENST00000504274 CCM2LQ9NUG4 571 aaPredicted RBP6.96□□□□□ -1.3
COPS4-203ENST00000504274 DPP7Q9UHL4 492 aa6.96□□□□□ -1.3
COPS4-203ENST00000504274 CDY2AQ9Y6F7 541 aa6.96□□□□□ -1.3
COPS4-203ENST00000504274 ALG1L2C9J202 215 aa6.95□□□□□ -1.3
COPS4-203ENST00000504274 LY86O95711 162 aa6.95□□□□□ -1.3
COPS4-203ENST00000504274 GPR15P49685 360 aa6.95□□□□□ -1.3
COPS4-203ENST00000504274 ADCY7P51828 1080 aa6.95□□□□□ -1.3
COPS4-203ENST00000504274 SESN2P58004 480 aaPredicted RBP6.95□□□□□ -1.3
COPS4-203ENST00000504274 ADAM8P78325 824 aa6.95□□□□□ -1.3
COPS4-203ENST00000504274 MGAT5Q09328 741 aa6.95□□□□□ -1.3
COPS4-203ENST00000504274 SAFB2Q14151 953 aaKnown RBP eCLIP6.95□□□□□ -1.3
COPS4-203ENST00000504274 ZNF568Q3ZCX4 644 aa6.95□□□□□ -1.3
COPS4-203ENST00000504274 BRDTQ58F21 947 aaPredicted RBP6.95□□□□□ -1.3
COPS4-203ENST00000504274 LCE4AQ5TA78 99 aa6.95□□□□□ -1.3
COPS4-203ENST00000504274 SYDE2Q5VT97 1194 aa6.95□□□□□ -1.3
COPS4-203ENST00000504274 SLFN13Q68D06 897 aa6.95□□□□□ -1.3
COPS4-203ENST00000504274 OR14C36Q8NHC7 312 aa6.95□□□□□ -1.3
COPS4-203ENST00000504274 TSPEARQ8WU66 669 aa6.95□□□□□ -1.3
COPS4-203ENST00000504274 HOMER2Q9NSB8 354 aa6.95□□□□□ -1.3
COPS4-203ENST00000504274 NPEPPSL1A6NEC2 478 aa6.94□□□□□ -1.3
COPS4-203ENST00000504274 GABRDO14764 452 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms