RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 CFAP221Q4G0U5 840 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 RNF19BQ6ZMZ0 732 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 FSIP1Q8NA03 581 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 IRGQQ8WZA9 623 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 VPS50Q96JG6 964 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 MOGAT1Q96PD6 335 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 TRAPPC9Q96Q05 1148 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 TUBGCP2Q9BSJ2 902 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 PACSIN1Q9BY11 444 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 Q9H521 79 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 PLSCR2Q9NRY7 297 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 V9GYQ6 96 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 KDM5BQ9UGL1 1544 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 C15orf38-AP3S2A0A0A6YYH1 394 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 TMEM191CA6NGB0 347 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 H0YCG3 227 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 LIN7AO14910 233 aaPredicted RBP6.66□□□□□ -1.34
CLCN3-204ENST00000504131 PSIP1O75475 530 aaKnown RBP6.66□□□□□ -1.34
CLCN3-204ENST00000504131 BCAR3O75815 825 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 CRYZL1O95825 349 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 TMEM191BP0C7N4 346 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 TGFB3P10600 412 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 GNALP38405 381 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 ME1P48163 572 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 RGS7P49802 495 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 NIPAL4Q0D2K0 466 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 CUL2Q13617 745 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 CTTNQ14247 550 aaKnown RBP6.66□□□□□ -1.34
CLCN3-204ENST00000504131 CLPPQ16740 277 aaPredicted RBP6.66□□□□□ -1.34
CLCN3-204ENST00000504131 GPR139Q6DWJ6 353 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 JADE1Q6IE81 842 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 PYHIN1Q6K0P9 492 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 TBC1D1Q86TI0 1168 aaPredicted RBP6.66□□□□□ -1.34
CLCN3-204ENST00000504131 BPHLQ86WA6 291 aaPredicted RBP6.66□□□□□ -1.34
CLCN3-204ENST00000504131 GALNT13Q8IUC8 556 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 RNF135Q8IUD6 432 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 SCUBE1Q8IWY4 988 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 HPS1Q92902 700 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 KIAA1143Q96AT1 154 aaPredicted RBP6.66□□□□□ -1.34
CLCN3-204ENST00000504131 DESI2Q9BSY9 194 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 NUP62CLQ9H1M0 184 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 TXLNGQ9NUQ3 528 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 SETD4Q9NVD3 440 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 DNAJC11Q9NVH1 559 aa6.66□□□□□ -1.34
CLCN3-204ENST00000504131 MAPKBP1O60336 1514 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 HECW1Q76N89 1606 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 A0A0G2JPF8 293 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 C16orf96A6NNT2 1141 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 HNRNPCL3B7ZW38 293 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 HNRNPCL4P0DMR1 293 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 XRCC5P13010 732 aaKnown RBP6.65□□□□□ -1.34
CLCN3-204ENST00000504131 RPL13P26373 211 aaKnown RBP6.65□□□□□ -1.34
CLCN3-204ENST00000504131 CNTFP26441 200 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 GSTT1P30711 240 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 DDIT3P35638 169 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 HSD17B2P37059 387 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 CD83Q01151 205 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 TMEM259Q4ZIN3 620 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 VWA3BQ502W6 1294 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 CEP55Q53EZ4 464 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 MIS18BP1Q6P0N0 1132 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 JAZF1Q86VZ6 243 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 AKAP1Q92667 903 aaKnown RBP eCLIP6.65□□□□□ -1.34
CLCN3-204ENST00000504131 TRIM43Q96BQ3 446 aaPredicted RBP6.65□□□□□ -1.34
CLCN3-204ENST00000504131 TBC1D20Q96BZ9 403 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 NSMCE3Q96MG7 304 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 C8orf37Q96NL8 207 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 ST20-MTHFSA0A0A6YYL1 179 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 MATN2O00339 956 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 CNOT3O75175 753 aaKnown RBP6.65□□□□□ -1.34
CLCN3-204ENST00000504131 DGKIO75912 1065 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 ALAS2P22557 587 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 PPP3CCP48454 512 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 PCP4P48539 62 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 PHC1P78364 1004 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 C2orf54Q08AI8 447 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 MSLNQ13421 630 aaPredicted RBP6.65□□□□□ -1.34
CLCN3-204ENST00000504131 MAPK6Q16659 721 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 TRIM16LQ309B1 348 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 CHMP6Q96FZ7 201 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 SP140LQ9H930 580 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 HOXC10Q9NYD6 342 aa6.65□□□□□ -1.34
CLCN3-204ENST00000504131 HBS1LQ9Y450 684 aaKnown RBP6.65□□□□□ -1.34
CLCN3-204ENST00000504131 H7C0C1 242 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 ZNF254O75437 659 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 LGR5O75473 907 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 ALDH1L1O75891 902 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 RASSF9O75901 435 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 KRT37O76014 449 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 PBLDP30039 288 aaPredicted RBP6.65□□□□□ -1.35
CLCN3-204ENST00000504131 RUNDC3AQ59EK9 446 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 PPP2R2DQ66LE6 453 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 FAM173BQ6P4H8 233 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 CNGA4Q8IV77 575 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 RAVER1Q8IY67 606 aaKnown RBP6.65□□□□□ -1.35
CLCN3-204ENST00000504131 NOD2Q9HC29 1040 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 VPS4AQ9UN37 437 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 PCDHGC5Q9Y5F6 944 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 C19orf81C9J6K1 198 aa6.65□□□□□ -1.35
CLCN3-204ENST00000504131 IFRD1O00458 451 aaPredicted RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms