RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 OTUD6AQ7L8S5 288 aa24.67■■□□□ 1.54
LSM6-203ENST00000503982 CATSPER4Q7RTX7 472 aa24.67■■□□□ 1.54
LSM6-203ENST00000503982 ADGRD2Q7Z7M1 963 aa24.67■■□□□ 1.54
LSM6-203ENST00000503982 KSR1Q8IVT5 923 aa24.67■■□□□ 1.54
LSM6-203ENST00000503982 FAM178BQ8IXR5 827 aa24.67■■□□□ 1.54
LSM6-203ENST00000503982 DIS3L2Q8IYB7 885 aaKnown RBP24.67■■□□□ 1.54
LSM6-203ENST00000503982 EXOC8Q8IYI6 725 aa24.67■■□□□ 1.54
LSM6-203ENST00000503982 GJD3Q8N144 294 aa24.67■■□□□ 1.54
LSM6-203ENST00000503982 LRRC43Q8N309 656 aa24.67■■□□□ 1.54
LSM6-203ENST00000503982 CCDC43Q96MW1 224 aaKnown RBP24.67■■□□□ 1.54
LSM6-203ENST00000503982 TLR9Q9NR96 1032 aa24.67■■□□□ 1.54
LSM6-203ENST00000503982 PIN4Q9Y237 131 aaKnown RBP24.67■■□□□ 1.54
LSM6-203ENST00000503982 IGKV6-21A0A0C4DH24 114 aa24.66■■□□□ 1.54
LSM6-203ENST00000503982 BTBD18B2RXH4 712 aa24.66■■□□□ 1.54
LSM6-203ENST00000503982 ATP2B1P20020 1258 aa24.66■■□□□ 1.54
LSM6-203ENST00000503982 COL9A1P20849 921 aa24.66■■□□□ 1.54
LSM6-203ENST00000503982 UBE3AQ05086 875 aa24.66■■□□□ 1.54
LSM6-203ENST00000503982 ZNF410Q86VK4 478 aa24.66■■□□□ 1.54
LSM6-203ENST00000503982 TPH2Q8IWU9 490 aa24.66■■□□□ 1.54
LSM6-203ENST00000503982 HELQQ8TDG4 1101 aa24.66■■□□□ 1.54
LSM6-203ENST00000503982 CASD1Q96PB1 797 aa24.66■■□□□ 1.54
LSM6-203ENST00000503982 CEP89Q96ST8 783 aa24.66■■□□□ 1.54
LSM6-203ENST00000503982 EPHX3Q9H6B9 360 aa24.66■■□□□ 1.54
LSM6-203ENST00000503982 CWH43Q9H720 699 aa24.66■■□□□ 1.54
LSM6-203ENST00000503982 RGL1Q9NZL6 768 aa24.66■■□□□ 1.54
LSM6-203ENST00000503982 PUF60Q9UHX1 559 aaKnown RBP24.66■■□□□ 1.54
LSM6-203ENST00000503982 PCDHGC5Q9Y5F6 944 aa24.66■■□□□ 1.54
LSM6-203ENST00000503982 MUC3AQ02505 3323 aa24.65■■□□□ 1.54
LSM6-203ENST00000503982 GUCY1B3Q02153 619 aa24.65■■□□□ 1.54
LSM6-203ENST00000503982 SAFBQ15424 915 aaKnown RBP eCLIP24.65■■□□□ 1.54
LSM6-203ENST00000503982 LONRF3Q496Y0 759 aa24.65■■□□□ 1.54
LSM6-203ENST00000503982 XKR9Q5GH70 373 aa24.65■■□□□ 1.54
LSM6-203ENST00000503982 CCDC83Q8IWF9 413 aa24.65■■□□□ 1.54
LSM6-203ENST00000503982 TMEM143Q96AN5 459 aa24.65■■□□□ 1.54
LSM6-203ENST00000503982 ZNF558Q96NG5 402 aa24.65■■□□□ 1.54
LSM6-203ENST00000503982 TLE6Q9H808 572 aa24.65■■□□□ 1.54
LSM6-203ENST00000503982 CD207Q9UJ71 328 aa24.65■■□□□ 1.54
LSM6-203ENST00000503982 COL4A3BPQ9Y5P4 624 aa24.65■■□□□ 1.54
LSM6-203ENST00000503982 A0A0U1RQF3 1178 aa24.64■■□□□ 1.54
LSM6-203ENST00000503982 YWHABP31946 246 aaKnown RBP24.64■■□□□ 1.54
LSM6-203ENST00000503982 CA8P35219 290 aa24.64■■□□□ 1.54
LSM6-203ENST00000503982 LTBRP36941 435 aa24.64■■□□□ 1.54
LSM6-203ENST00000503982 RFC5P40937 340 aa24.64■■□□□ 1.54
LSM6-203ENST00000503982 DLX2Q07687 328 aaPredicted RBP24.64■■□□□ 1.54
LSM6-203ENST00000503982 CTC1Q2NKJ3 1217 aa24.64■■□□□ 1.54
LSM6-203ENST00000503982 PLPP4Q5VZY2 271 aa24.64■■□□□ 1.54
LSM6-203ENST00000503982 C4orf19Q8IY42 314 aa24.64■■□□□ 1.54
LSM6-203ENST00000503982 ZNF579Q8NAF0 562 aaKnown RBP24.64■■□□□ 1.54
LSM6-203ENST00000503982 PSPC1Q8WXF1 523 aaKnown RBP24.64■■□□□ 1.54
LSM6-203ENST00000503982 ZSWIM4Q9H7M6 989 aa24.64■■□□□ 1.54
LSM6-203ENST00000503982 ENTPD7Q9NQZ7 604 aa24.64■■□□□ 1.54
LSM6-203ENST00000503982 CHST12Q9NRB3 414 aa24.64■■□□□ 1.54
LSM6-203ENST00000503982 WRAP73Q9P2S5 460 aaPredicted RBP24.64■■□□□ 1.54
LSM6-203ENST00000503982 PCDHA12Q9UN75 941 aa24.64■■□□□ 1.54
LSM6-203ENST00000503982 NEMFO60524 1076 aa24.63■■□□□ 1.53
LSM6-203ENST00000503982 EOMESO95936 686 aa24.63■■□□□ 1.53
LSM6-203ENST00000503982 SRGAP2CP0DJJ0 459 aa24.63■■□□□ 1.53
LSM6-203ENST00000503982 PBX3P40426 434 aa24.63■■□□□ 1.53
LSM6-203ENST00000503982 TXKP42681 527 aa24.63■■□□□ 1.53
LSM6-203ENST00000503982 KRT17Q04695 432 aa24.63■■□□□ 1.53
LSM6-203ENST00000503982 ADAM15Q13444 863 aa24.63■■□□□ 1.53
LSM6-203ENST00000503982 COL19A1Q14993 1142 aa24.63■■□□□ 1.53
LSM6-203ENST00000503982 KCNT2Q6UVM3 1135 aa24.63■■□□□ 1.53
LSM6-203ENST00000503982 TNFRSF25Q93038 417 aa24.63■■□□□ 1.53
LSM6-203ENST00000503982 CD320Q9NPF0 282 aa24.63■■□□□ 1.53
LSM6-203ENST00000503982 RNF19AQ9NV58 838 aa24.63■■□□□ 1.53
LSM6-203ENST00000503982 LIMCH1Q9UPQ0 1083 aa24.63■■□□□ 1.53
LSM6-203ENST00000503982 PPME1Q9Y570 386 aa24.63■■□□□ 1.53
LSM6-203ENST00000503982 PER2O15055 1255 aa24.62■■□□□ 1.53
LSM6-203ENST00000503982 TBX10O75333 385 aa24.62■■□□□ 1.53
LSM6-203ENST00000503982 SKIP12755 728 aa24.62■■□□□ 1.53
LSM6-203ENST00000503982 PPM1AP35813 382 aa24.62■■□□□ 1.53
LSM6-203ENST00000503982 CLLU1OSQ5K130 101 aa24.62■■□□□ 1.53
LSM6-203ENST00000503982 LRRC55Q6ZSA7 311 aa24.62■■□□□ 1.53
LSM6-203ENST00000503982 EFHBQ8N7U6 833 aa24.62■■□□□ 1.53
LSM6-203ENST00000503982 TCP11Q8WWU5 503 aa24.62■■□□□ 1.53
LSM6-203ENST00000503982 MRPS27Q92552 414 aaKnown RBP24.62■■□□□ 1.53
LSM6-203ENST00000503982 MTRQ99707 1265 aa24.62■■□□□ 1.53
LSM6-203ENST00000503982 EIF2AK1Q9BQI3 630 aaKnown RBP24.62■■□□□ 1.53
LSM6-203ENST00000503982 MRPL9Q9BYD2 267 aaKnown RBP24.62■■□□□ 1.53
LSM6-203ENST00000503982 TTC12Q9H892 705 aaPredicted RBP24.62■■□□□ 1.53
LSM6-203ENST00000503982 MBTPS2O43462 519 aa24.61■■□□□ 1.53
LSM6-203ENST00000503982 PHKA2P46019 1235 aa24.61■■□□□ 1.53
LSM6-203ENST00000503982 RBM25P49756 843 aaKnown RBP24.61■■□□□ 1.53
LSM6-203ENST00000503982 ERVFC1P60507 584 aa24.61■■□□□ 1.53
LSM6-203ENST00000503982 SMAD4Q13485 552 aaKnown RBP24.61■■□□□ 1.53
LSM6-203ENST00000503982 GNL2Q13823 731 aaKnown RBP24.61■■□□□ 1.53
LSM6-203ENST00000503982 EMC2Q15006 297 aa24.61■■□□□ 1.53
LSM6-203ENST00000503982 PRPF31Q8WWY3 499 aaKnown RBP24.61■■□□□ 1.53
LSM6-203ENST00000503982 KHSRPQ92945 711 aaKnown RBP eCLIP24.61■■□□□ 1.53
LSM6-203ENST00000503982 LPPQ93052 612 aa24.61■■□□□ 1.53
LSM6-203ENST00000503982 C8orf76Q96K31 380 aa24.61■■□□□ 1.53
LSM6-203ENST00000503982 SPG21Q9NZD8 308 aa24.61■■□□□ 1.53
LSM6-203ENST00000503982 INPP5FQ9Y2H2 1132 aa24.61■■□□□ 1.53
LSM6-203ENST00000503982 GAS2O43903 313 aaKnown RBP24.6■■□□□ 1.53
LSM6-203ENST00000503982 PDE12Q6L8Q7 609 aaKnown RBP24.6■■□□□ 1.53
LSM6-203ENST00000503982 TMC7Q7Z402 723 aa24.6■■□□□ 1.53
LSM6-203ENST00000503982 FAM184AQ8NB25 1140 aa24.6■■□□□ 1.53
LSM6-203ENST00000503982 TCF25Q9BQ70 676 aa24.6■■□□□ 1.53
LSM6-203ENST00000503982 DHX33Q9H6R0 707 aaKnown RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms