RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 SP7Q8TDD2 431 aaPredicted RBP22.94■■□□□ 1.26
PDGFRA-203ENST00000503856 USP28Q96RU2 1077 aa22.94■■□□□ 1.26
PDGFRA-203ENST00000503856 POLR3FQ9H1D9 316 aaPredicted RBP22.94■■□□□ 1.26
PDGFRA-203ENST00000503856 GPRC5CQ9NQ84 441 aa22.94■■□□□ 1.26
PDGFRA-203ENST00000503856 DNM3Q9UQ16 869 aa22.94■■□□□ 1.26
PDGFRA-203ENST00000503856 CHD7Q9P2D1 2997 aa22.94■■□□□ 1.26
PDGFRA-203ENST00000503856 CDH23Q9H251 3354 aa22.93■■□□□ 1.26
PDGFRA-203ENST00000503856 PDIA4P13667 645 aaKnown RBP22.93■■□□□ 1.26
PDGFRA-203ENST00000503856 ZSCAN20P17040 1043 aaPredicted RBP22.93■■□□□ 1.26
PDGFRA-203ENST00000503856 CYP11B2P19099 503 aa22.93■■□□□ 1.26
PDGFRA-203ENST00000503856 SFPQP23246 707 aaKnown RBP eCLIP22.93■■□□□ 1.26
PDGFRA-203ENST00000503856 MARCKSP29966 332 aaPredicted RBP22.93■■□□□ 1.26
PDGFRA-203ENST00000503856 SARSP49591 514 aaKnown RBP22.93■■□□□ 1.26
PDGFRA-203ENST00000503856 SLC24A5Q71RS6 500 aa22.93■■□□□ 1.26
PDGFRA-203ENST00000503856 KCNK18Q7Z418 384 aa22.93■■□□□ 1.26
PDGFRA-203ENST00000503856 NPAS4Q8IUM7 802 aa22.93■■□□□ 1.26
PDGFRA-203ENST00000503856 MCPH1Q8NEM0 835 aa22.93■■□□□ 1.26
PDGFRA-203ENST00000503856 AK8Q96MA6 479 aa22.93■■□□□ 1.26
PDGFRA-203ENST00000503856 PNMA5Q96PV4 448 aa22.93■■□□□ 1.26
PDGFRA-203ENST00000503856 PLIN2Q99541 437 aa22.93■■□□□ 1.26
PDGFRA-203ENST00000503856 MINDY3Q9H8M7 445 aa22.93■■□□□ 1.26
PDGFRA-203ENST00000503856 C1orf112Q9NSG2 853 aa22.93■■□□□ 1.26
PDGFRA-203ENST00000503856 RALGAPA2Q2PPJ7 1873 aa22.92■■□□□ 1.26
PDGFRA-203ENST00000503856 DGKIO75912 1065 aa22.92■■□□□ 1.26
PDGFRA-203ENST00000503856 EYA4O95677 639 aa22.92■■□□□ 1.26
PDGFRA-203ENST00000503856 STAG3L1P0CL83 205 aa22.92■■□□□ 1.26
PDGFRA-203ENST00000503856 ZSCAN22P10073 491 aaPredicted RBP22.92■■□□□ 1.26
PDGFRA-203ENST00000503856 GLRA2P23416 452 aa22.92■■□□□ 1.26
PDGFRA-203ENST00000503856 GRB10Q13322 594 aa22.92■■□□□ 1.26
PDGFRA-203ENST00000503856 CAPSQ13938 189 aa22.92■■□□□ 1.26
PDGFRA-203ENST00000503856 HYIQ5T013 277 aa22.92■■□□□ 1.26
PDGFRA-203ENST00000503856 FAM102BQ5T8I3 360 aa22.92■■□□□ 1.26
PDGFRA-203ENST00000503856 CATSPER4Q7RTX7 472 aa22.92■■□□□ 1.26
PDGFRA-203ENST00000503856 SRGAP1Q7Z6B7 1085 aa22.92■■□□□ 1.26
PDGFRA-203ENST00000503856 CABP7Q86V35 215 aa22.92■■□□□ 1.26
PDGFRA-203ENST00000503856 LRFN2Q9ULH4 789 aa22.92■■□□□ 1.26
PDGFRA-203ENST00000503856 COL4A6Q14031 1691 aa22.92■■□□□ 1.26
PDGFRA-203ENST00000503856 KIAA1671Q9BY89 1806 aa22.92■■□□□ 1.26
PDGFRA-203ENST00000503856 LONP1P36776 959 aaKnown RBP22.91■■□□□ 1.26
PDGFRA-203ENST00000503856 PHKA2P46019 1235 aa22.91■■□□□ 1.26
PDGFRA-203ENST00000503856 PTENP60484 403 aa22.91■■□□□ 1.26
PDGFRA-203ENST00000503856 FAM189BP81408 668 aa22.91■■□□□ 1.26
PDGFRA-203ENST00000503856 PKP1Q13835 747 aa22.91■■□□□ 1.26
PDGFRA-203ENST00000503856 TFDP1Q14186 410 aa22.91■■□□□ 1.26
PDGFRA-203ENST00000503856 ARNTL2Q8WYA1 636 aa22.91■■□□□ 1.26
PDGFRA-203ENST00000503856 ZNF689Q96CS4 500 aaPredicted RBP22.91■■□□□ 1.26
PDGFRA-203ENST00000503856 CDK5RAP3Q96JB5 506 aa22.91■■□□□ 1.26
PDGFRA-203ENST00000503856 RC3H2Q9HBD1 1191 aaKnown RBP22.91■■□□□ 1.26
PDGFRA-203ENST00000503856 POLD4Q9HCU8 107 aa22.91■■□□□ 1.26
PDGFRA-203ENST00000503856 STXBP5LQ9Y2K9 1186 aa22.91■■□□□ 1.26
PDGFRA-203ENST00000503856 PCDHB7Q9Y5E2 793 aa22.91■■□□□ 1.26
PDGFRA-203ENST00000503856 PRRC2BQ5JSZ5 2229 aaKnown RBP22.9■■□□□ 1.26
PDGFRA-203ENST00000503856 EPOPA6NHQ4 379 aa22.9■■□□□ 1.26
PDGFRA-203ENST00000503856 RFXAPO00287 272 aa22.9■■□□□ 1.26
PDGFRA-203ENST00000503856 UBA7P41226 1012 aa22.9■■□□□ 1.26
PDGFRA-203ENST00000503856 POU5F1BQ06416 359 aa22.9■■□□□ 1.26
PDGFRA-203ENST00000503856 SLC39A14Q15043 492 aa22.9■■□□□ 1.26
PDGFRA-203ENST00000503856 TGS1Q96RS0 853 aaKnown RBP22.9■■□□□ 1.26
PDGFRA-203ENST00000503856 NT5C3AQ9H0P0 336 aa22.9■■□□□ 1.26
PDGFRA-203ENST00000503856 CHST12Q9NRB3 414 aa22.9■■□□□ 1.26
PDGFRA-203ENST00000503856 TFIP11Q9UBB9 837 aaKnown RBP22.9■■□□□ 1.26
PDGFRA-203ENST00000503856 FBXO2Q9UK22 296 aaPredicted RBP22.9■■□□□ 1.26
PDGFRA-203ENST00000503856 MTUS1Q9ULD2 1270 aa22.9■■□□□ 1.26
PDGFRA-203ENST00000503856 SRPRBQ9Y5M8 271 aaKnown RBP22.9■■□□□ 1.26
PDGFRA-203ENST00000503856 TCHHQ07283 1943 aa22.9■■□□□ 1.26
PDGFRA-203ENST00000503856 F13A1P00488 732 aa22.89■■□□□ 1.25
PDGFRA-203ENST00000503856 GATMP50440 423 aa22.89■■□□□ 1.25
PDGFRA-203ENST00000503856 ERVK-21P61565 698 aa22.89■■□□□ 1.25
PDGFRA-203ENST00000503856 TMEM119Q4V9L6 283 aa22.89■■□□□ 1.25
PDGFRA-203ENST00000503856 IFNLR1Q8IU57 520 aaPredicted RBP22.89■■□□□ 1.25
PDGFRA-203ENST00000503856 CSRNP2Q9H175 543 aa22.89■■□□□ 1.25
PDGFRA-203ENST00000503856 TMEM161AQ9NX61 479 aa22.89■■□□□ 1.25
PDGFRA-203ENST00000503856 DACT1Q9NYF0 836 aa22.89■■□□□ 1.25
PDGFRA-203ENST00000503856 PIN4Q9Y237 131 aaKnown RBP22.89■■□□□ 1.25
PDGFRA-203ENST00000503856 COL4A4P53420 1690 aaPredicted RBP22.89■■□□□ 1.25
PDGFRA-203ENST00000503856 ADGRA3Q8IWK6 1321 aa22.88■■□□□ 1.25
PDGFRA-203ENST00000503856 LRRIQ4A6NIV6 560 aa22.88■■□□□ 1.25
PDGFRA-203ENST00000503856 FOSL2P15408 326 aa22.88■■□□□ 1.25
PDGFRA-203ENST00000503856 NASPP49321 788 aaPredicted RBP22.88■■□□□ 1.25
PDGFRA-203ENST00000503856 BTG3Q14201 252 aaPredicted RBP22.88■■□□□ 1.25
PDGFRA-203ENST00000503856 ADGRE1Q14246 886 aa22.88■■□□□ 1.25
PDGFRA-203ENST00000503856 FOXD4L6Q3SYB3 417 aaPredicted RBP22.88■■□□□ 1.25
PDGFRA-203ENST00000503856 SPECC1Q5M775 1068 aa22.88■■□□□ 1.25
PDGFRA-203ENST00000503856 FOXD4L3Q6VB84 417 aaPredicted RBP22.88■■□□□ 1.25
PDGFRA-203ENST00000503856 ECHDC2Q86YB7 292 aa22.88■■□□□ 1.25
PDGFRA-203ENST00000503856 FIBCD1Q8N539 461 aa22.88■■□□□ 1.25
PDGFRA-203ENST00000503856 BSNDQ8WZ55 320 aa22.88■■□□□ 1.25
PDGFRA-203ENST00000503856 CALML4Q96GE6 196 aa22.88■■□□□ 1.25
PDGFRA-203ENST00000503856 ZNF396Q96N95 335 aaPredicted RBP22.88■■□□□ 1.25
PDGFRA-203ENST00000503856 CLIC6Q96NY7 704 aa22.88■■□□□ 1.25
PDGFRA-203ENST00000503856 GAS2L1Q99501 681 aaPredicted RBP22.88■■□□□ 1.25
PDGFRA-203ENST00000503856 C17orf80Q9BSJ5 609 aa22.88■■□□□ 1.25
PDGFRA-203ENST00000503856 RNF216Q9NWF9 866 aaPredicted RBP22.88■■□□□ 1.25
PDGFRA-203ENST00000503856 A0A0U1RQF3 1178 aa22.87■■□□□ 1.25
PDGFRA-203ENST00000503856 INO80B-WBP1J3KQ70 363 aa22.87■■□□□ 1.25
PDGFRA-203ENST00000503856 SLC26A4O43511 780 aa22.87■■□□□ 1.25
PDGFRA-203ENST00000503856 PAN2Q504Q3 1202 aaKnown RBP22.87■■□□□ 1.25
PDGFRA-203ENST00000503856 TWF2Q6IBS0 349 aaKnown RBP22.87■■□□□ 1.25
PDGFRA-203ENST00000503856 RINT1Q6NUQ1 792 aa22.87■■□□□ 1.25
PDGFRA-203ENST00000503856 USP49Q70CQ1 688 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms