RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 LY9Q9HBG7 655 aa17.95■□□□□ 0.46
PDLIM7-210ENST00000503827 FOSP01100 380 aaPredicted RBP17.94■□□□□ 0.46
PDLIM7-210ENST00000503827 NFXL1Q6ZNB6 911 aa17.94■□□□□ 0.46
PDLIM7-210ENST00000503827 HEATR3Q7Z4Q2 680 aa17.94■□□□□ 0.46
PDLIM7-210ENST00000503827 GPR161Q8N6U8 529 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-210ENST00000503827 SUMF1Q8NBK3 374 aa17.94■□□□□ 0.46
PDLIM7-210ENST00000503827 BORCS6Q96GS4 357 aa17.94■□□□□ 0.46
PDLIM7-210ENST00000503827 PGBD1Q96JS3 809 aa17.94■□□□□ 0.46
PDLIM7-210ENST00000503827 SCLT1Q96NL6 688 aa17.94■□□□□ 0.46
PDLIM7-210ENST00000503827 DLGAP2Q9P1A6 1054 aa17.94■□□□□ 0.46
PDLIM7-210ENST00000503827 NCDNQ9UBB6 729 aa17.94■□□□□ 0.46
PDLIM7-210ENST00000503827 STK39Q9UEW8 545 aa17.94■□□□□ 0.46
PDLIM7-210ENST00000503827 MAFBQ9Y5Q3 323 aaPredicted RBP17.94■□□□□ 0.46
PDLIM7-210ENST00000503827 FRYLO94915 3013 aa17.94■□□□□ 0.46
PDLIM7-210ENST00000503827 CACNA1IQ9P0X4 2223 aa17.94■□□□□ 0.46
PDLIM7-210ENST00000503827 N4BP1O75113 896 aaKnown RBP17.93■□□□□ 0.46
PDLIM7-210ENST00000503827 GALTP07902 379 aa17.93■□□□□ 0.46
PDLIM7-210ENST00000503827 DARSP14868 501 aaKnown RBP17.93■□□□□ 0.46
PDLIM7-210ENST00000503827 RNASELQ05823 741 aaKnown RBP17.93■□□□□ 0.46
PDLIM7-210ENST00000503827 KIAA0319Q5VV43 1072 aa17.93■□□□□ 0.46
PDLIM7-210ENST00000503827 CASC1Q6TDU7 716 aa17.93■□□□□ 0.46
PDLIM7-210ENST00000503827 NIPA1Q7RTP0 329 aa17.93■□□□□ 0.46
PDLIM7-210ENST00000503827 CHD1LQ86WJ1 897 aa17.93■□□□□ 0.46
PDLIM7-210ENST00000503827 CCDC82Q8N4S0 544 aa17.93■□□□□ 0.46
PDLIM7-210ENST00000503827 CMASQ8NFW8 434 aaPredicted RBP17.93■□□□□ 0.46
PDLIM7-210ENST00000503827 GPR152Q8TDT2 470 aa17.93■□□□□ 0.46
PDLIM7-210ENST00000503827 ANO3Q9BYT9 981 aa17.93■□□□□ 0.46
PDLIM7-210ENST00000503827 NRDE2Q9H7Z3 1164 aa17.93■□□□□ 0.46
PDLIM7-210ENST00000503827 ARHGEF3Q9NR81 526 aa17.93■□□□□ 0.46
PDLIM7-210ENST00000503827 EPS15L1Q9UBC2 864 aa17.93■□□□□ 0.46
PDLIM7-210ENST00000503827 DOCK8Q8NF50 2099 aa17.93■□□□□ 0.46
PDLIM7-210ENST00000503827 CCDC69A6NI79 296 aa17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 CNPP09543 421 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 CALM1P0DP23 149 aa17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 CALM2P0DP24 149 aa17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 CALM3P0DP25 149 aa17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 FGFR4P22455 802 aa17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 GPC3P51654 580 aa17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 VARS2Q5ST30 1063 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 ELMSAN1Q6PJG2 1045 aa17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 GLB1LQ6UWU2 654 aa17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 CYP26C1Q6V0L0 522 aa17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 TEX2Q8IWB9 1127 aa17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 MB21D2Q8IYB1 491 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 TMTC2Q8N394 836 aa17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 LRRC71Q8N4P6 559 aa17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 BCL7CQ8WUZ0 217 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 ZNF668Q96K58 619 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 WDR6Q9NNW5 1121 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 CHST12Q9NRB3 414 aa17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 TBC1D13Q9NVG8 400 aa17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 DPP7Q9UHL4 492 aa17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 TAF6LQ9Y6J9 622 aa17.92■□□□□ 0.46
PDLIM7-210ENST00000503827 ACACBO00763 2458 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 CCDC195A0A1B0GUA6 201 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 SSBP05455 408 aaKnown RBP eCLIP17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 SKIP12755 728 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 RXRAP19793 462 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 PHKA2P46019 1235 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 ATXN1P54253 815 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 PTH1RQ03431 593 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 ST3GAL2Q16842 350 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 NOMO2Q5JPE7 1267 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 DCLRE1AQ6PJP8 1040 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 PLA2G4DQ86XP0 818 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 SMC5Q8IY18 1101 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 LINC01465Q8N7H1 131 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 NLRP7Q8WX94 980 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 FAM167AQ96KS9 214 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 MTA3Q9BTC8 594 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 GBP3Q9H0R5 595 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 RIC8AQ9NPQ8 531 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 MAN1C1Q9NR34 630 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 MRPL17Q9NRX2 175 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 TCEAL9Q9UHQ7 104 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 INPP5FQ9Y2H2 1132 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 CLUHO75153 1309 aa17.91■□□□□ 0.46
PDLIM7-210ENST00000503827 MTCL1Q9Y4B5 1905 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 PRR5-ARHGAP8B1AHC4 643 aa17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 IPO5O00410 1097 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 DHX15O43143 795 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 PSAPP07602 524 aa17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 SREBF1P36956 1147 aa17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 SLC11A1P49279 550 aa17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 NAPAP54920 295 aa17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 ARHGAP8P85298 464 aa17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 ZNF746Q6NUN9 644 aaPredicted RBP17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 SMAP1Q8IYB5 467 aaPredicted RBP17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 PJA1Q8NG27 643 aa17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 RUFY2Q8WXA3 655 aa17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 SECISBP2LQ93073 1101 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 VN1R3Q9BXE9 311 aa17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 RHOBTB2Q9BYZ6 727 aa17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 TBC1D22BQ9NU19 505 aa17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 DNAJB4Q9UDY4 337 aa17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 CDV3Q9UKY7 258 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 PATJQ8NI35 1801 aa17.9■□□□□ 0.46
PDLIM7-210ENST00000503827 POTEMA6NI47 508 aa17.89■□□□□ 0.45
PDLIM7-210ENST00000503827 SPTLC1O15269 473 aa17.89■□□□□ 0.45
PDLIM7-210ENST00000503827 INPPL1O15357 1258 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms