RNA–Protein interactions for RNA: ENST00000503121.5

SYNE4-206, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-206ENST00000503121 FERMT3Q86UX7 667 aa13.4□□□□□ -0.26
SYNE4-206ENST00000503121 NACC1Q96RE7 527 aa13.4□□□□□ -0.26
SYNE4-206ENST00000503121 C11orf84Q9BUA3 381 aaPredicted RBP13.4□□□□□ -0.26
SYNE4-206ENST00000503121 ELAC1Q9H777 363 aaKnown RBP13.4□□□□□ -0.26
SYNE4-206ENST00000503121 TUFT1Q9NNX1 390 aa13.4□□□□□ -0.26
SYNE4-206ENST00000503121 CHST12Q9NRB3 414 aa13.4□□□□□ -0.26
SYNE4-206ENST00000503121 UNC80Q8N2C7 3258 aa13.4□□□□□ -0.26
SYNE4-206ENST00000503121 C5orf67F2Z3F1 127 aa13.39□□□□□ -0.27
SYNE4-206ENST00000503121 HOXA2O43364 376 aa13.39□□□□□ -0.27
SYNE4-206ENST00000503121 MED24O75448 989 aa13.39□□□□□ -0.27
SYNE4-206ENST00000503121 RPA1P27694 616 aa13.39□□□□□ -0.27
SYNE4-206ENST00000503121 MXD4Q14582 209 aaPredicted RBP13.39□□□□□ -0.27
SYNE4-206ENST00000503121 RILPL1Q5EBL4 403 aa13.39□□□□□ -0.27
SYNE4-206ENST00000503121 TWF2Q6IBS0 349 aaKnown RBP13.39□□□□□ -0.27
SYNE4-206ENST00000503121 SRGAP1Q7Z6B7 1085 aa13.39□□□□□ -0.27
SYNE4-206ENST00000503121 ABI1Q8IZP0 508 aa13.39□□□□□ -0.27
SYNE4-206ENST00000503121 C4orf32Q8N8J7 132 aa13.39□□□□□ -0.27
SYNE4-206ENST00000503121 RNF149Q8NC42 400 aa13.39□□□□□ -0.27
SYNE4-206ENST00000503121 ATXN2LQ8WWM7 1075 aaKnown RBP13.39□□□□□ -0.27
SYNE4-206ENST00000503121 MRPL38Q96DV4 380 aaKnown RBP13.39□□□□□ -0.27
SYNE4-206ENST00000503121 POLR3CQ9BUI4 534 aaPredicted RBP13.39□□□□□ -0.27
SYNE4-206ENST00000503121 PLVAPQ9BX97 442 aa13.39□□□□□ -0.27
SYNE4-206ENST00000503121 RAB34Q9BZG1 259 aa13.39□□□□□ -0.27
SYNE4-206ENST00000503121 IFT122Q9HBG6 1241 aa13.39□□□□□ -0.27
SYNE4-206ENST00000503121 LRWD1Q9UFC0 647 aa13.39□□□□□ -0.27
SYNE4-206ENST00000503121 PIN4Q9Y237 131 aaKnown RBP13.39□□□□□ -0.27
SYNE4-206ENST00000503121 COL4A6Q14031 1691 aa13.38□□□□□ -0.27
SYNE4-206ENST00000503121 A0A0U1RQF3 1178 aa13.38□□□□□ -0.27
SYNE4-206ENST00000503121 LAD1O00515 517 aa13.38□□□□□ -0.27
SYNE4-206ENST00000503121 USO1O60763 962 aaKnown RBP13.38□□□□□ -0.27
SYNE4-206ENST00000503121 LINC00271P0C7V0 271 aa13.38□□□□□ -0.27
SYNE4-206ENST00000503121 CCT6AP40227 531 aaKnown RBP13.38□□□□□ -0.27
SYNE4-206ENST00000503121 PHKA2P46019 1235 aa13.38□□□□□ -0.27
SYNE4-206ENST00000503121 FXR2P51116 673 aaKnown RBP eCLIP13.38□□□□□ -0.27
SYNE4-206ENST00000503121 MRPS5P82675 430 aaKnown RBP13.38□□□□□ -0.27
SYNE4-206ENST00000503121 TFDP1Q14186 410 aa13.38□□□□□ -0.27
SYNE4-206ENST00000503121 PDIA5Q14554 519 aa13.38□□□□□ -0.27
SYNE4-206ENST00000503121 HAUS3Q68CZ6 603 aa13.38□□□□□ -0.27
SYNE4-206ENST00000503121 POTEGQ6S5H5 508 aa13.38□□□□□ -0.27
SYNE4-206ENST00000503121 DTHD1Q6ZMT9 781 aa13.38□□□□□ -0.27
SYNE4-206ENST00000503121 MAEAQ7L5Y9 396 aa13.38□□□□□ -0.27
SYNE4-206ENST00000503121 ECHDC2Q86YB7 292 aa13.38□□□□□ -0.27
SYNE4-206ENST00000503121 XPNPEP1Q9NQW7 623 aa13.38□□□□□ -0.27
SYNE4-206ENST00000503121 CUL9Q8IWT3 2517 aa13.38□□□□□ -0.27
SYNE4-206ENST00000503121 TRANK1O15050 2925 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 GRM6O15303 877 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 CSPG5O95196 566 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 EOMESO95936 686 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 CUL4AQ13619 759 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 TIGD5Q53EQ6 642 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 NAALADL2Q58DX5 795 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 TJAP1Q5JTD0 557 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 SNX29Q8TEQ0 813 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 P2RX5Q93086 422 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 HLA-CQ95604 372 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 ASB2Q96Q27 587 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 TMEM117Q9H0C3 514 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 MINDY3Q9H8M7 445 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 ALG13Q9NP73 1137 aaKnown RBP13.37□□□□□ -0.27
SYNE4-206ENST00000503121 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.37□□□□□ -0.27
SYNE4-206ENST00000503121 AAASQ9NRG9 546 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 TYW1Q9NV66 732 aaKnown RBP13.37□□□□□ -0.27
SYNE4-206ENST00000503121 DBR1Q9UK59 544 aaKnown RBP13.37□□□□□ -0.27
SYNE4-206ENST00000503121 COG5Q9UP83 839 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 PLAGL2Q9UPG8 496 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 PCDHB12Q9Y5F1 795 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 STK24Q9Y6E0 443 aa13.37□□□□□ -0.27
SYNE4-206ENST00000503121 MYO7AQ13402 2215 aa13.36□□□□□ -0.27
SYNE4-206ENST00000503121 ARHGEF35A5YM69 484 aa13.36□□□□□ -0.27
SYNE4-206ENST00000503121 INO80B-WBP1J3KQ70 363 aa13.36□□□□□ -0.27
SYNE4-206ENST00000503121 ERLIN2O94905 339 aa13.36□□□□□ -0.27
SYNE4-206ENST00000503121 SKIP12755 728 aa13.36□□□□□ -0.27
SYNE4-206ENST00000503121 ARL2P36404 184 aa13.36□□□□□ -0.27
SYNE4-206ENST00000503121 TFF2Q03403 129 aa13.36□□□□□ -0.27
SYNE4-206ENST00000503121 NCBP1Q09161 790 aaKnown RBP13.36□□□□□ -0.27
SYNE4-206ENST00000503121 AAK1Q2M2I8 961 aa13.36□□□□□ -0.27
SYNE4-206ENST00000503121 LONRF3Q496Y0 759 aa13.36□□□□□ -0.27
SYNE4-206ENST00000503121 KRT79Q5XKE5 535 aa13.36□□□□□ -0.27
SYNE4-206ENST00000503121 KLHL23Q8NBE8 558 aa13.36□□□□□ -0.27
SYNE4-206ENST00000503121 MCPH1Q8NEM0 835 aa13.36□□□□□ -0.27
SYNE4-206ENST00000503121 ASAP3Q8TDY4 903 aa13.36□□□□□ -0.27
SYNE4-206ENST00000503121 SYMPKQ92797 1274 aaKnown RBP13.36□□□□□ -0.27
SYNE4-206ENST00000503121 CASD1Q96PB1 797 aa13.36□□□□□ -0.27
SYNE4-206ENST00000503121 COL25A1Q9BXS0 654 aaPredicted RBP13.36□□□□□ -0.27
SYNE4-206ENST00000503121 LMAN2LQ9H0V9 348 aa13.36□□□□□ -0.27
SYNE4-206ENST00000503121 POLR3FQ9H1D9 316 aaPredicted RBP13.36□□□□□ -0.27
SYNE4-206ENST00000503121 NSUN3Q9H649 340 aaKnown RBP13.36□□□□□ -0.27
SYNE4-206ENST00000503121 AGPAT5Q9NUQ2 364 aa13.36□□□□□ -0.27
SYNE4-206ENST00000503121 FAM105AQ9NUU6 356 aa13.36□□□□□ -0.27
SYNE4-206ENST00000503121 KIAA1024Q9UPX6 916 aa13.36□□□□□ -0.27
SYNE4-206ENST00000503121 COL4A4P53420 1690 aaPredicted RBP13.36□□□□□ -0.27
SYNE4-206ENST00000503121 VPS37CA5D8V6 355 aaPredicted RBP13.35□□□□□ -0.27
SYNE4-206ENST00000503121 ITGB1P05556 798 aa13.35□□□□□ -0.27
SYNE4-206ENST00000503121 PDCP20941 246 aa13.35□□□□□ -0.27
SYNE4-206ENST00000503121 MUTP22033 750 aa13.35□□□□□ -0.27
SYNE4-206ENST00000503121 GLRA2P23416 452 aa13.35□□□□□ -0.27
SYNE4-206ENST00000503121 PRPHP41219 470 aa13.35□□□□□ -0.27
SYNE4-206ENST00000503121 RAB27AP51159 221 aa13.35□□□□□ -0.27
SYNE4-206ENST00000503121 PTENP60484 403 aa13.35□□□□□ -0.27
SYNE4-206ENST00000503121 CAPSQ13938 189 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms