RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	MYL5	Q02045	173 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	TBC1D8B	Q0IIM8	1120 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	PAK1	Q13153	545 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	LRRC41	Q15345	812 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	ODR4	Q5SWX8	454 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	MARCH8	Q5T0T0	291 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	FAM102B	Q5T8I3	360 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	TTI2	Q6NXR4	508 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	MAEA	Q7L5Y9	396 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	EXOC8	Q8IYI6	725 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	MYOCD	Q8IZQ8	938 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	ZNF507	Q8TCN5	953 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	TRAPPC12	Q8WVT3	735 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	NELFB	Q8WX92	580 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	SLC7A3	Q8WY07	619 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	KCTD10	Q9H3F6	313 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	SEMA6B	Q9H3T3	888 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	ZHX3	Q9H4I2	956 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	HMX1	Q9NP08	348 aa	Predicted RBP	13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	XPNPEP3	Q9NQH7	507 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	TBC1D7	Q9P0N9	293 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	CTNND2	Q9UQB3	1225 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	MAPK8IP1	Q9UQF2	711 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	CEP350	Q5VT06	3117 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	UBE4B	O95155	1302 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	PSMA7	O14818	248 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	MYL3	P08590	195 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	GLRA2	P23416	452 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	NPTX2	P47972	431 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	MRE11	P49959	708 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	PPFIA1	Q13136	1202 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	DRP2	Q13474	957 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	STIM1	Q13586	685 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	ALCAM	Q13740	583 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	GRIK4	Q16099	956 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	KIAA0753	Q2KHM9	967 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	VARS2	Q5ST30	1063 aa	Known RBP	13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	IER5	Q5VY09	327 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	KLHL10	Q6JEL2	608 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	FAM178B	Q8IXR5	827 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	ASAP3	Q8TDY4	903 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	SH3TC2	Q8TF17	1288 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	P2RX5	Q93086	422 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	TMEM143	Q96AN5	459 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	DUSP9	Q99956	384 aa	Known RBP	13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	JPH2	Q9BR39	696 aa	Predicted RBP	13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	MTG1	Q9BT17	334 aa	Predicted RBP	13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	KATNAL1	Q9BW62	490 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	MRPL44	Q9H9J2	332 aa	Known RBP	13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	SPC25	Q9HBM1	224 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	MYH11	P35749	1972 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	ZMYM2	Q9UBW7	1377 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	FRMPD3	Q5JV73	1810 aa		13.41	□□□□□ -0.26
MATR3-231	ENST00000502394	ADGRA3	Q8IWK6	1321 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	TRIM49B	A6NDI0	452 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	RRN3P2	A6NIE6	340 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	SMTNL1	A8MU46	457 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	MAGEB2	O15479	319 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	SMIM10L2A	P0DMW4	78 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	SMIM10L2B	P0DMW5	78 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	ZNF18	P17022	549 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	PEX3	P56589	373 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	STX17	P56962	302 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	GTF2B	Q00403	316 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	HIC1	Q14526	733 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	GNAS	Q5JWF2	1037 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	SPATA1	Q5VX52	437 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	MTHFD1L	Q6UB35	978 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	CTU1	Q7Z7A3	348 aa	Known RBP	13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	SLC17A8	Q8NDX2	589 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	TMEM161B	Q8NDZ6	487 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	LMBR1	Q8WVP7	490 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.4	□□□□□ -0.26	2e-11	■■■□□ 18.4
MATR3-231	ENST00000502394	PAK6	Q9NQU5	681 aa	Predicted RBP	13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	ARHGAP28	Q9P2N2	729 aa		13.4	□□□□□ -0.26
MATR3-231	ENST00000502394	NRCAM	Q92823	1304 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	ZEB2	O60315	1214 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	PRPF6	O94906	941 aa	Known RBP	13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	KIF20A	O95235	890 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	GCNT3	O95395	438 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	HSPA1A	P0DMV8	641 aa	Known RBP	13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	HSPA1B	P0DMV9	641 aa	Known RBP	13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	KLRC1	P26715	233 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	NAMPT	P43490	491 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	LRRC63	Q05C16	580 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	KCNA1	Q09470	495 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	DMP1	Q13316	513 aa	Predicted RBP	13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	CAPS	Q13938	189 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	L1TD1	Q5T7N2	865 aa	Known RBP	13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	CDKAL1	Q5VV42	579 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	ANKRD40	Q6AI12	368 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	TAS1R3	Q7RTX0	852 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	HAUS6	Q7Z4H7	955 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	LRRC71	Q8N4P6	559 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	TCP11	Q8WWU5	503 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	HVCN1	Q96D96	273 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms