RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 CDK5RAP3Q96JB5 506 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 DDX47Q9H0S4 455 aaKnown RBP11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 BMP2KQ9NSY1 1161 aaPredicted RBP11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 BARHL2Q9NY43 387 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 GPRC5DQ9NZD1 345 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 ADAMTS1Q9UHI8 967 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 ATP8A1Q9Y2Q0 1164 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 L3MBTL1Q9Y468 752 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 PSME4Q14997 1843 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 PP2D1A8MPX8 630 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 IGF2BP3O00425 579 aaKnown RBP eCLIP11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 TRAF5O00463 557 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 ECM2O94769 699 aaPredicted RBP11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 UBOX5O94941 541 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 GGPS1O95749 300 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 BAG3O95817 575 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 H2AFZP0C0S5 128 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 ATP4AP20648 1035 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 GMPSP49915 693 aaPredicted RBP11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 RASSF2P50749 326 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 FXR2P51116 673 aaKnown RBP eCLIP11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 INHBEP58166 350 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 GPSM2P81274 684 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 DR1Q01658 176 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 DIXDC1Q155Q3 683 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 H2AFVQ71UI9 128 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 DDX42Q86XP3 938 aaKnown RBP eCLIP11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 SUPT20HQ8NEM7 779 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 LARP4BQ92615 738 aaKnown RBP11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 TMEM237Q96Q45 408 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 OSBPL1AQ9BXW6 950 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 CARD9Q9H257 536 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 NLRC4Q9NPP4 1024 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 PAPOLBQ9NRJ5 636 aaKnown RBP11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 USP40Q9NVE5 1235 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 POLLQ9UGP5 575 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 AMACRQ9UHK6 382 aa11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 ZNF646O15015 1829 aaPredicted RBP11.9□□□□□ -0.5
AC055717.1-201ENST00000502221 HNRNPCL1O60812 293 aaKnown RBP11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 RTN3O95197 1032 aaPredicted RBP11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 GSTA2P09210 222 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 SMARCA1P28370 1054 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 VEGFBP49765 207 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 RPS6KA3P51812 740 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 RNASE9P60153 205 aaKnown RBP11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 DYNC1I2Q13409 638 aaKnown RBP11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 GRM4Q14833 912 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 CNGA2Q16280 664 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 ZCWPW2Q504Y3 356 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 SBK1Q52WX2 424 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 NEK8Q86SG6 692 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 TRIM59Q8IWR1 403 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 ZC3H3Q8IXZ2 948 aaKnown RBP11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 GALNT15Q8N3T1 639 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 MDM1Q8TC05 714 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 DYDC1Q8WWB3 177 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 BICD1Q96G01 975 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 PRMT1Q99873 361 aaKnown RBP11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 RIOK1Q9BRS2 568 aaKnown RBP11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 VPS33BQ9H267 617 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 ADAM7Q9H2U9 754 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 DBNDD1Q9H9R9 158 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 C6orf50Q9HD87 102 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 ATP8A2Q9NTI2 1148 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 ZDHHC18Q9NUE0 388 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 CTTNBP2NLQ9P2B4 639 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 NAGPAQ9UK23 515 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 MYH1P12882 1939 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 THSD7BQ9C0I4 1608 aa11.89□□□□□ -0.51
AC055717.1-201ENST00000502221 hCG_1984214I3L0E3 225 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 RIMBP2O15034 1052 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 TTI1O43156 1089 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 ATP6V1C1P21283 382 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 CALB2P22676 271 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 KLRK1P26718 216 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 FLT3P36888 993 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 PEX19P40855 299 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 RAB27AP51159 221 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 DNA2P51530 1060 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 HIRAP54198 1017 aaPredicted RBP11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 INF2Q27J81 1249 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 EDRF1Q3B7T1 1238 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 KIAA1755Q5JYT7 1200 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 CIAPIN1Q6FI81 312 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 ALKBH5Q6P6C2 394 aaKnown RBP11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 TRMT10CQ7L0Y3 403 aaKnown RBP11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 SESTD1Q86VW0 696 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 ZNF713Q8N859 430 aaPredicted RBP11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 TRPM4Q8TD43 1214 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 AP1M1Q9BXS5 423 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 GANQ9H2C0 597 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 KCNQ5Q9NR82 932 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 KLHL14Q9P2G3 628 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 ARPP21Q9UBL0 812 aaPredicted RBP11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 PACSIN2Q9UNF0 486 aaPredicted RBP11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 ZBTB12Q9Y330 459 aaPredicted RBP11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 FAM205AQ6ZU69 1335 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 DCDC2CA8MYV0 355 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 RASGRF2O14827 1237 aa11.88□□□□□ -0.51
AC055717.1-201ENST00000502221 SMIM24O75264 130 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms