RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	CHRNA1	P02708	482 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	MMP1	P03956	469 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	HMGN5	P82970	282 aa	Known RBP	11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	GUCY1B3	Q02153	619 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	TBC1D8B	Q0IIM8	1120 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	NR5A1	Q13285	461 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	GPNMB	Q14956	572 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	SKIV2L	Q15477	1246 aa	Known RBP	11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	NPY5R	Q15761	445 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	FAM26D	Q5JW98	314 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	FBXO47	Q5MNV8	452 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	ODR4	Q5SWX8	454 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	MARCH8	Q5T0T0	291 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	KRT40	Q6A162	431 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	NCAPH2	Q6IBW4	605 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	RPAIN	Q86UA6	219 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	SLFN12	Q8IYM2	578 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	NME8	Q8N427	588 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	USP38	Q8NB14	1042 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	RDM1	Q8NG50	284 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	HPS1	Q92902	700 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	ZNF775	Q96BV0	537 aa	Predicted RBP	11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	RAD9A	Q99638	391 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	INSL6	Q9Y581	213 aa		11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.98	□□□□□ -0.49
CDK11A-222	ENST00000498810	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	MAGEB2	O15479	319 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	PSMD10	O75832	226 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	ATP2B1	P20020	1258 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	CYP3A7	P24462	503 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	CD52	P31358	61 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	CLCN3	P51790	818 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	MGAT3	Q09327	533 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	NFX1	Q12986	1120 aa	Known RBP	11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	LPIN1	Q14693	890 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	CCDC85B	Q15834	202 aa	Predicted RBP	11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	TCTN1	Q2MV58	587 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	LINC01559	Q495D7	138 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	MTERF2	Q49AM1	385 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	PPP4R3A	Q6IN85	833 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	ZNF511	Q8NB15	262 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	BANK1	Q8NDB2	785 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	IL27	Q8NEV9	243 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	ETNPPL	Q8TBG4	499 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	FAM20A	Q96MK3	541 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	LLPH	Q9BRT6	129 aa	Known RBP	11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	FTHL17	Q9BXU8	183 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	CELF4	Q9BZC1	486 aa	Known RBP	11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	SUGCT	Q9HAC7	445 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	LRFN2	Q9ULH4	789 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	KIAA1671	Q9BY89	1806 aa		11.97	□□□□□ -0.49
CDK11A-222	ENST00000498810	DENND3	A2RUS2	1198 aa		11.96	□□□□□ -0.49
CDK11A-222	ENST00000498810	NEMF	O60524	1076 aa		11.96	□□□□□ -0.49
CDK11A-222	ENST00000498810	RPS6KA5	O75582	802 aa		11.96	□□□□□ -0.49
CDK11A-222	ENST00000498810	C22orf31	O95567	290 aa		11.96	□□□□□ -0.49
CDK11A-222	ENST00000498810	VTN	P04004	478 aa		11.96	□□□□□ -0.49
CDK11A-222	ENST00000498810	FDPS	P14324	419 aa	Known RBP	11.96	□□□□□ -0.49
CDK11A-222	ENST00000498810	DNM2	P50570	870 aa		11.96	□□□□□ -0.49
CDK11A-222	ENST00000498810	TAP1	Q03518	808 aa		11.96	□□□□□ -0.49
CDK11A-222	ENST00000498810	CALCRL	Q16602	461 aa		11.96	□□□□□ -0.49
CDK11A-222	ENST00000498810	UGCG	Q16739	394 aa		11.96	□□□□□ -0.49
CDK11A-222	ENST00000498810	KIZ	Q2M2Z5	673 aa		11.96	□□□□□ -0.49
CDK11A-222	ENST00000498810	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
CDK11A-222	ENST00000498810	LRRC71	Q8N4P6	559 aa		11.96	□□□□□ -0.49
CDK11A-222	ENST00000498810	TGS1	Q96RS0	853 aa	Known RBP	11.96	□□□□□ -0.49
CDK11A-222	ENST00000498810	OSMR	Q99650	979 aa		11.96	□□□□□ -0.49
CDK11A-222	ENST00000498810	LCHN	A4D1U4	455 aa		11.95	□□□□□ -0.5
CDK11A-222	ENST00000498810	BTBD18	B2RXH4	712 aa		11.95	□□□□□ -0.5
CDK11A-222	ENST00000498810	TBX3	O15119	743 aa		11.95	□□□□□ -0.5
CDK11A-222	ENST00000498810	CTH	P32929	405 aa		11.95	□□□□□ -0.5
CDK11A-222	ENST00000498810	RBM25	P49756	843 aa	Known RBP	11.95	□□□□□ -0.5
CDK11A-222	ENST00000498810	PSMC5	P62195	406 aa		11.95	□□□□□ -0.5
CDK11A-222	ENST00000498810	TMEM266	Q2M3C6	531 aa		11.95	□□□□□ -0.5
CDK11A-222	ENST00000498810	XKR3	Q5GH77	459 aa		11.95	□□□□□ -0.5
CDK11A-222	ENST00000498810	EFCAB12	Q6NXP0	572 aa		11.95	□□□□□ -0.5
CDK11A-222	ENST00000498810	GDPD5	Q8WTR4	605 aa		11.95	□□□□□ -0.5
CDK11A-222	ENST00000498810	JPH2	Q9BR39	696 aa	Predicted RBP	11.95	□□□□□ -0.5
CDK11A-222	ENST00000498810	KDM4C	Q9H3R0	1056 aa		11.95	□□□□□ -0.5
CDK11A-222	ENST00000498810	MAP10	Q9P2G4	905 aa		11.95	□□□□□ -0.5
CDK11A-222	ENST00000498810	PADI3	Q9ULW8	664 aa		11.95	□□□□□ -0.5
CDK11A-222	ENST00000498810	NOL7	Q9UMY1	257 aa	Known RBP	11.95	□□□□□ -0.5
CDK11A-222	ENST00000498810	SQOR	Q9Y6N5	450 aa		11.95	□□□□□ -0.5
CDK11A-222	ENST00000498810	ADGRA3	Q8IWK6	1321 aa		11.94	□□□□□ -0.5
CDK11A-222	ENST00000498810	LINC01553	A4QN01	128 aa		11.94	□□□□□ -0.5
CDK11A-222	ENST00000498810	GPR182	O15218	404 aa		11.94	□□□□□ -0.5
CDK11A-222	ENST00000498810	STAG3L1	P0CL83	205 aa		11.94	□□□□□ -0.5
CDK11A-222	ENST00000498810	ATP4A	P20648	1035 aa		11.94	□□□□□ -0.5
CDK11A-222	ENST00000498810	QARS	P47897	775 aa	Known RBP	11.94	□□□□□ -0.5
CDK11A-222	ENST00000498810	POLG	P54098	1239 aa	Predicted RBP	11.94	□□□□□ -0.5
CDK11A-222	ENST00000498810	CYP4A11	Q02928	519 aa		11.94	□□□□□ -0.5
CDK11A-222	ENST00000498810	PPP2R5C	Q13362	524 aa		11.94	□□□□□ -0.5
CDK11A-222	ENST00000498810	FIBCD1	Q8N539	461 aa		11.94	□□□□□ -0.5
CDK11A-222	ENST00000498810	SLC7A3	Q8WY07	619 aa		11.94	□□□□□ -0.5
CDK11A-222	ENST00000498810	MBOAT7	Q96N66	472 aa		11.94	□□□□□ -0.5
CDK11A-222	ENST00000498810	LXN	Q9BS40	222 aa		11.94	□□□□□ -0.5
CDK11A-222	ENST00000498810	OSBPL7	Q9BZF2	842 aa		11.94	□□□□□ -0.5
CDK11A-222	ENST00000498810	KCNMB3	Q9NPA1	279 aa		11.94	□□□□□ -0.5
CDK11A-222	ENST00000498810	TTC3	P53804	2025 aa		11.94	□□□□□ -0.5
CDK11A-222	ENST00000498810	KDM3A	Q9Y4C1	1321 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms