RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 ARMT1Q9H993 441 aa4.35□□□□□ -1.71
CLTC-209ENST00000498711 MAGEF1Q9HAY2 307 aa4.35□□□□□ -1.71
CLTC-209ENST00000498711 RMND1Q9NWS8 449 aa4.35□□□□□ -1.71
CLTC-209ENST00000498711 HCN2Q9UL51 889 aa4.35□□□□□ -1.71
CLTC-209ENST00000498711 FAN1Q9Y2M0 1017 aa4.35□□□□□ -1.71
CLTC-209ENST00000498711 ABCB11O95342 1321 aa4.35□□□□□ -1.71
CLTC-209ENST00000498711 THSD7BQ9C0I4 1608 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 ANKRD31Q8N7Z5 1873 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 MYH13Q9UKX3 1938 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 KCNJ18B7U540 433 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 N4BP1O75113 896 aaKnown RBP4.34□□□□□ -1.71
CLTC-209ENST00000498711 PPFIA4O75335 1185 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 RPN1P04843 607 aaKnown RBP4.34□□□□□ -1.71
CLTC-209ENST00000498711 PRPHP41219 470 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 ZNF252P-AS1Q0IIN9 211 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 PAK1Q13153 545 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 KCNJ12Q14500 433 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 SART3Q15020 963 aaKnown RBP4.34□□□□□ -1.71
CLTC-209ENST00000498711 PFKFB3Q16875 520 aaPredicted RBP4.34□□□□□ -1.71
CLTC-209ENST00000498711 TTC38Q5R3I4 469 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 ODR4Q5SWX8 454 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 TTI2Q6NXR4 508 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 MAGEB6Q8N7X4 407 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 ENAHQ8N8S7 591 aaPredicted RBP4.34□□□□□ -1.71
CLTC-209ENST00000498711 PRPF38AQ8NAV1 312 aaKnown RBP4.34□□□□□ -1.71
CLTC-209ENST00000498711 GIMAP8Q8ND71 665 aaPredicted RBP4.34□□□□□ -1.71
CLTC-209ENST00000498711 DHTKD1Q96HY7 919 aaPredicted RBP4.34□□□□□ -1.71
CLTC-209ENST00000498711 ZFP42Q96MM3 310 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 ERGIC2Q96RQ1 377 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 CEP89Q96ST8 783 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 CDC5LQ99459 802 aaKnown RBP4.34□□□□□ -1.71
CLTC-209ENST00000498711 NACAP1Q9BZK3 213 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 CUEDC2Q9H467 287 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 LRRC4BQ9NT99 713 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 ATXN7L1Q9ULK2 861 aaPredicted RBP4.34□□□□□ -1.71
CLTC-209ENST00000498711 SOX13Q9UN79 622 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 SRCAPQ6ZRS2 3230 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 COL11A2P13942 1736 aaPredicted RBP4.34□□□□□ -1.71
CLTC-209ENST00000498711 FER1L6Q2WGJ9 1857 aa4.34□□□□□ -1.71
CLTC-209ENST00000498711 STARD3NLO95772 234 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 PARP1P09874 1014 aaKnown RBP4.34□□□□□ -1.72
CLTC-209ENST00000498711 XBP1P17861 261 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 PPP1R2P41236 205 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 ORC2Q13416 577 aaPredicted RBP4.34□□□□□ -1.72
CLTC-209ENST00000498711 ZNF423Q2M1K9 1284 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 ASTE1Q2TB18 679 aaPredicted RBP4.34□□□□□ -1.72
CLTC-209ENST00000498711 KIF4BQ2VIQ3 1234 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 MRM1Q6IN84 353 aaKnown RBP4.34□□□□□ -1.72
CLTC-209ENST00000498711 TRIM46Q7Z4K8 759 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 VN1R5Q7Z5H4 357 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 CD302Q8IX05 232 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 TAB3Q8N5C8 712 aaPredicted RBP4.34□□□□□ -1.72
CLTC-209ENST00000498711 COG1Q8WTW3 980 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 NELFBQ8WX92 580 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 ESR2Q92731 530 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 CAVIN3Q969G5 261 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 CHP1Q99653 195 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 C7orf25Q9BPX7 421 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 EDEM3Q9BZQ6 932 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 LZTFL1Q9NQ48 299 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 HOMER2Q9NSB8 354 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 TCP11L1Q9NUJ3 509 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 SLC4A4Q9Y6R1 1079 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 IRS2Q9Y4H2 1338 aa4.34□□□□□ -1.72
CLTC-209ENST00000498711 ATAD5Q96QE3 1844 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 ROBO3Q96MS0 1386 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 ATP8B3O60423 1300 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 TNKSO95271 1327 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 LTBP3Q9NS15 1303 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 TTC26A0AVF1 554 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 A6NNZ2 444 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 RBAK-RBAKDNI3L0D1 243 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 LAD1O00515 517 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 PTPRAP18433 802 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 CNGA1P29973 690 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 PRCPP42785 496 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 NOVP48745 357 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 DNM2P50570 870 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 EIF5P55010 431 aaKnown RBP4.33□□□□□ -1.72
CLTC-209ENST00000498711 KRT83P78385 493 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 CKAP4Q07065 602 aaKnown RBP4.33□□□□□ -1.72
CLTC-209ENST00000498711 TUBB8Q3ZCM7 444 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 MIIPQ5JXC2 388 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 FAM182BQ5T319 152 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 GALNT17Q6IS24 598 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 ADAMTSL4Q6UY14 1074 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 ADGRA1Q86SQ6 560 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 AMOTL1Q8IY63 956 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 SRBD1Q8N5C6 995 aaKnown RBP4.33□□□□□ -1.72
CLTC-209ENST00000498711 EIF1ADQ8N9N8 165 aaKnown RBP4.33□□□□□ -1.72
CLTC-209ENST00000498711 ZNF384Q8TF68 577 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 TMEM40Q8WWA1 233 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 MMS19Q96T76 1030 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 FAM126AQ9BYI3 521 aaPredicted RBP4.33□□□□□ -1.72
CLTC-209ENST00000498711 UBE2OQ9C0C9 1292 aaKnown RBP4.33□□□□□ -1.72
CLTC-209ENST00000498711 SUGCTQ9HAC7 445 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 CNNM1Q9NRU3 951 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 PUF60Q9UHX1 559 aaKnown RBP4.33□□□□□ -1.72
CLTC-209ENST00000498711 GGA2Q9UJY4 613 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 CTNND2Q9UQB3 1225 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms