RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 DPYSL3Q14195 570 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 PLCB4Q15147 1175 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 SAMD5Q5TGI4 173 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 PPP4R3AQ6IN85 833 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 DCDC5Q6ZRR9 648 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 FASTKD5Q7L8L6 764 aaKnown RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 GDF7Q7Z4P5 450 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 BMP8AQ7Z5Y6 402 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 ZNF589Q86UQ0 364 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 DGKHQ86XP1 1220 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 KIAA0825Q8IV33 1275 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 GRAMD1CQ8IYS0 662 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 MAML2Q8IZL2 1156 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 LARGE2Q8N3Y3 721 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 CPT1CQ8TCG5 803 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 SLC20A1Q8WUM9 679 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 STON2Q8WXE9 905 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 BPIFA2Q96DR5 249 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 SPDL1Q96EA4 605 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 TBC1D32Q96NH3 1257 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 PSD2Q9BQI7 771 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 URM1Q9BTM9 101 aaKnown RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 TTPALQ9BTX7 342 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 TRIM34Q9BYJ4 488 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 TTYH3Q9C0H2 523 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 MKRN2Q9H000 416 aaKnown RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 HAUS4Q9H6D7 363 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 C10orf88Q9H8K7 445 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 SLC28A3Q9HAS3 691 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 SEPT10Q9P0V9 454 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 PCDHGC3Q9UN70 934 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 NPIPA1Q9UND3 350 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 C2orf71A6NGG8 1288 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 HEPACAM2A8MVW5 462 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 MAGEB17A8MXT2 336 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 BTBD19C9JJ37 291 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 E7EWF7 191 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 GCOM1H8Y6P7 765 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 GLI1P08151 1106 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 ODC1P11926 461 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 CD1BP29016 333 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 CXCR5P32302 372 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 ITGA7Q13683 1181 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 FSTL4Q6MZW2 842 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 ZNF549Q6P9A3 640 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 SASS6Q6UVJ0 657 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 MOB2Q70IA6 237 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 PPARGC1BQ86YN6 1023 aaKnown RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 LCORLQ8N3X6 602 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 CCDC33Q8N5R6 958 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 USHBP1Q8N6Y0 703 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 TTC29Q8NA56 475 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 DBF4BQ8NFT6 615 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 CSGALNACT1Q8TDX6 532 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 RFFLQ8WZ73 363 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 EXOC4Q96A65 974 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 CHMP4CQ96CF2 233 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 CCDC97Q96F63 343 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 ZNF274Q96GC6 653 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 IGSF21Q96ID5 467 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 BTBD6Q96KE9 485 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 INSM2Q96T92 566 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 SPATA5L1Q9BVQ7 753 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 LHPPQ9H008 270 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 LIME1Q9H400 295 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 NRIP3Q9NQ35 241 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 HELLSQ9NRZ9 838 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 KCNK4Q9NYG8 393 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 SRPK3Q9UPE1 567 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 MOB4Q9Y3A3 225 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 GTF3C5Q9Y5Q8 519 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 JMJD1CQ15652 2540 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 COL4A5P29400 1685 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 SPAG17Q6Q759 2223 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 KIF13BQ9NQT8 1826 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 LRRC10BA6NIK2 292 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 SMTNL1A8MU46 457 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 PRR5-ARHGAP8B1AHC4 643 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 K7EQS6 105 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 POLRMTO00411 1230 aaKnown RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 RB1P06400 928 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 FESP07332 822 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 TGFB3P10600 412 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 BMP3P12645 472 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 PTGS2P35354 604 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 ADD1P35611 737 aaKnown RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 METAP2P50579 478 aaKnown RBP eCLIP1.61□□□□□ -2.15
XRN1-214ENST00000498077 C21orf59P57076 290 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 SRP54P61011 504 aaKnown RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 ARHGAP8P85298 464 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 APOBRQ0VD83 1088 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 SCRN3Q0VDG4 424 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 STRN3Q13033 797 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 CCINQ13939 588 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 SLC9A5Q14940 896 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 IQCB1Q15051 598 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 UAP1Q16222 522 aaPredicted RBP1.61□□□□□ -2.15
XRN1-214ENST00000498077 CPSF6Q16630 551 aaKnown RBP eCLIP1.61□□□□□ -2.15
XRN1-214ENST00000498077 TSNAXIP1Q2TAA8 658 aa1.61□□□□□ -2.15
XRN1-214ENST00000498077 CEACAM21Q3KPI0 293 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms