RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 SLC39A11Q8N1S5 342 aa20.84■□□□□ 0.93
PRKCB-209ENST00000498058 LRRC43Q8N309 656 aa20.84■□□□□ 0.93
PRKCB-209ENST00000498058 ZNF558Q96NG5 402 aa20.84■□□□□ 0.93
PRKCB-209ENST00000498058 SCLT1Q96NL6 688 aa20.84■□□□□ 0.93
PRKCB-209ENST00000498058 TCF25Q9BQ70 676 aa20.84■□□□□ 0.93
PRKCB-209ENST00000498058 C22orf23Q9BZE7 217 aa20.84■□□□□ 0.93
PRKCB-209ENST00000498058 S1PR5Q9H228 398 aa20.84■□□□□ 0.93
PRKCB-209ENST00000498058 PDRG1Q9NUG6 133 aa20.84■□□□□ 0.93
PRKCB-209ENST00000498058 WRAP73Q9P2S5 460 aaPredicted RBP20.84■□□□□ 0.93
PRKCB-209ENST00000498058 DDX25Q9UHL0 483 aaKnown RBP20.84■□□□□ 0.93
PRKCB-209ENST00000498058 VAV3Q9UKW4 847 aa20.84■□□□□ 0.93
PRKCB-209ENST00000498058 WDFY4Q6ZS81 3184 aa20.83■□□□□ 0.93
PRKCB-209ENST00000498058 MEIS3P2A8K0S8 358 aa20.83■□□□□ 0.93
PRKCB-209ENST00000498058 DDX11L8A8MPP1 907 aa20.83■□□□□ 0.93
PRKCB-209ENST00000498058 NT5C1B-RDH14C9J2C7 533 aa20.83■□□□□ 0.93
PRKCB-209ENST00000498058 HOXA2O43364 376 aa20.83■□□□□ 0.93
PRKCB-209ENST00000498058 C8orf34Q49A92 452 aa20.83■□□□□ 0.93
PRKCB-209ENST00000498058 PDE12Q6L8Q7 609 aaKnown RBP20.83■□□□□ 0.93
PRKCB-209ENST00000498058 TMEM184AQ6ZMB5 413 aa20.83■□□□□ 0.93
PRKCB-209ENST00000498058 ZNF710Q8N1W2 664 aa20.83■□□□□ 0.93
PRKCB-209ENST00000498058 OXER1Q8TDS5 423 aa20.83■□□□□ 0.93
PRKCB-209ENST00000498058 LPPQ93052 612 aa20.83■□□□□ 0.93
PRKCB-209ENST00000498058 CDCA3Q99618 268 aaPredicted RBP20.83■□□□□ 0.93
PRKCB-209ENST00000498058 PHF20Q9BVI0 1012 aa20.83■□□□□ 0.93
PRKCB-209ENST00000498058 APOL5Q9BWW9 433 aa20.83■□□□□ 0.93
PRKCB-209ENST00000498058 CDH22Q9UJ99 828 aa20.83■□□□□ 0.93
PRKCB-209ENST00000498058 MAFO75444 373 aaPredicted RBP20.82■□□□□ 0.92
PRKCB-209ENST00000498058 EOMESO95936 686 aa20.82■□□□□ 0.92
PRKCB-209ENST00000498058 NPEPPSP55786 919 aa20.82■□□□□ 0.92
PRKCB-209ENST00000498058 LETM2Q2VYF4 491 aa20.82■□□□□ 0.92
PRKCB-209ENST00000498058 LONRF3Q496Y0 759 aa20.82■□□□□ 0.92
PRKCB-209ENST00000498058 EARS2Q5JPH6 523 aaKnown RBP20.82■□□□□ 0.92
PRKCB-209ENST00000498058 ANKRD54Q6NXT1 300 aa20.82■□□□□ 0.92
PRKCB-209ENST00000498058 LLGL2Q6P1M3 1020 aa20.82■□□□□ 0.92
PRKCB-209ENST00000498058 ABI1Q8IZP0 508 aa20.82■□□□□ 0.92
PRKCB-209ENST00000498058 EDAQ92838 391 aa20.82■□□□□ 0.92
PRKCB-209ENST00000498058 PHF7Q9BWX1 381 aaPredicted RBP20.82■□□□□ 0.92
PRKCB-209ENST00000498058 GCOM2Q9BZD3 368 aaPredicted RBP20.82■□□□□ 0.92
PRKCB-209ENST00000498058 KCNMB3Q9NPA1 279 aa20.82■□□□□ 0.92
PRKCB-209ENST00000498058 ENTPD7Q9NQZ7 604 aa20.82■□□□□ 0.92
PRKCB-209ENST00000498058 SPG21Q9NZD8 308 aa20.82■□□□□ 0.92
PRKCB-209ENST00000498058 SUCLA2Q9P2R7 463 aaPredicted RBP20.82■□□□□ 0.92
PRKCB-209ENST00000498058 CTDNEP1O95476 244 aa20.81■□□□□ 0.92
PRKCB-209ENST00000498058 TECP42680 631 aa20.81■□□□□ 0.92
PRKCB-209ENST00000498058 PHKA2P46019 1235 aa20.81■□□□□ 0.92
PRKCB-209ENST00000498058 GALNT17Q6IS24 598 aa20.81■□□□□ 0.92
PRKCB-209ENST00000498058 KRT25Q7Z3Z0 450 aa20.81■□□□□ 0.92
PRKCB-209ENST00000498058 TMEM173Q86WV6 379 aaPredicted RBP20.81■□□□□ 0.92
PRKCB-209ENST00000498058 RHPN2Q8IUC4 686 aa20.81■□□□□ 0.92
PRKCB-209ENST00000498058 HAS1Q92839 578 aa20.81■□□□□ 0.92
PRKCB-209ENST00000498058 RPGRIP1Q96KN7 1286 aa20.81■□□□□ 0.92
PRKCB-209ENST00000498058 FBXL18Q96ME1 805 aa20.81■□□□□ 0.92
PRKCB-209ENST00000498058 PUF60Q9UHX1 559 aaKnown RBP20.81■□□□□ 0.92
PRKCB-209ENST00000498058 TPCN1Q9ULQ1 816 aa20.81■□□□□ 0.92
PRKCB-209ENST00000498058 FAM205CA6NFA0 338 aa20.8■□□□□ 0.92
PRKCB-209ENST00000498058 PSMC5P62195 406 aa20.8■□□□□ 0.92
PRKCB-209ENST00000498058 PPP2R5CQ13362 524 aa20.8■□□□□ 0.92
PRKCB-209ENST00000498058 TMC7Q7Z402 723 aa20.8■□□□□ 0.92
PRKCB-209ENST00000498058 BCL7CQ8WUZ0 217 aaPredicted RBP20.8■□□□□ 0.92
PRKCB-209ENST00000498058 TRAIPQ9BWF2 469 aa20.8■□□□□ 0.92
PRKCB-209ENST00000498058 UPF2Q9HAU5 1272 aaKnown RBP20.8■□□□□ 0.92
PRKCB-209ENST00000498058 IFT122Q9HBG6 1241 aa20.8■□□□□ 0.92
PRKCB-209ENST00000498058 NGRNQ9NPE2 291 aaKnown RBP20.8■□□□□ 0.92
PRKCB-209ENST00000498058 DACT1Q9NYF0 836 aa20.8■□□□□ 0.92
PRKCB-209ENST00000498058 C2orf71A6NGG8 1288 aa20.79■□□□□ 0.92
PRKCB-209ENST00000498058 B4GALT3O60512 393 aa20.79■□□□□ 0.92
PRKCB-209ENST00000498058 PPM1AP35813 382 aa20.79■□□□□ 0.92
PRKCB-209ENST00000498058 BCAR1P56945 870 aa20.79■□□□□ 0.92
PRKCB-209ENST00000498058 FAM177A1Q8N128 213 aaPredicted RBP20.79■□□□□ 0.92
PRKCB-209ENST00000498058 CYP26B1Q9NR63 512 aa20.79■□□□□ 0.92
PRKCB-209ENST00000498058 CHST12Q9NRB3 414 aa20.79■□□□□ 0.92
PRKCB-209ENST00000498058 PFKFB2O60825 505 aa20.78■□□□□ 0.92
PRKCB-209ENST00000498058 ZXDAP98168 799 aa20.78■□□□□ 0.92
PRKCB-209ENST00000498058 KRT17Q04695 432 aa20.78■□□□□ 0.92
PRKCB-209ENST00000498058 CPLX2Q6PUV4 134 aaKnown RBP20.78■□□□□ 0.92
PRKCB-209ENST00000498058 NEK8Q86SG6 692 aa20.78■□□□□ 0.92
PRKCB-209ENST00000498058 ZNF410Q86VK4 478 aa20.78■□□□□ 0.92
PRKCB-209ENST00000498058 MRPL43Q8N983 215 aaKnown RBP20.78■□□□□ 0.92
PRKCB-209ENST00000498058 FEZF2Q8TBJ5 459 aa20.78■□□□□ 0.92
PRKCB-209ENST00000498058 AUTS2Q8WXX7 1259 aa20.78■□□□□ 0.92
PRKCB-209ENST00000498058 NLRP4Q96MN2 994 aa20.78■□□□□ 0.92
PRKCB-209ENST00000498058 NRDE2Q9H7Z3 1164 aa20.78■□□□□ 0.92
PRKCB-209ENST00000498058 MINDY3Q9H8M7 445 aa20.78■□□□□ 0.92
PRKCB-209ENST00000498058 PIN4Q9Y237 131 aaKnown RBP20.78■□□□□ 0.92
PRKCB-209ENST00000498058 ARID2Q68CP9 1835 aa20.78■□□□□ 0.92
PRKCB-209ENST00000498058 STK36Q9NRP7 1315 aa20.78■□□□□ 0.92
PRKCB-209ENST00000498058 CCDC194A0A1B0GVG4 234 aa20.77■□□□□ 0.92
PRKCB-209ENST00000498058 ZBTB39O15060 712 aa20.77■□□□□ 0.92
PRKCB-209ENST00000498058 CLASP2O75122 1294 aaKnown RBP20.77■□□□□ 0.92
PRKCB-209ENST00000498058 FDPSP14324 419 aaKnown RBP20.77■□□□□ 0.92
PRKCB-209ENST00000498058 QARSP47897 775 aaKnown RBP20.77■□□□□ 0.92
PRKCB-209ENST00000498058 DNM2P50570 870 aa20.77■□□□□ 0.92
PRKCB-209ENST00000498058 CDC42EP1Q00587 391 aa20.77■□□□□ 0.92
PRKCB-209ENST00000498058 TWF2Q6IBS0 349 aaKnown RBP20.77■□□□□ 0.92
PRKCB-209ENST00000498058 PPP4R3AQ6IN85 833 aa20.77■□□□□ 0.92
PRKCB-209ENST00000498058 TRIM67Q6ZTA4 783 aa20.77■□□□□ 0.92
PRKCB-209ENST00000498058 PIK3AP1Q6ZUJ8 805 aa20.77■□□□□ 0.92
PRKCB-209ENST00000498058 ALYREFQ86V81 257 aaKnown RBP20.77■□□□□ 0.92
PRKCB-209ENST00000498058 TMEM143Q96AN5 459 aa20.77■□□□□ 0.92
PRKCB-209ENST00000498058 FAM20AQ96MK3 541 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms