RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 SDHAP31040 664 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 ECI1P42126 302 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 CASP2P42575 452 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 NOP2P46087 812 aaKnown RBP3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 IREB2P48200 963 aaKnown RBP3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 FNTBP49356 437 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 GTF2A2P52657 109 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 BTKQ06187 659 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 SNX17Q15036 470 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 EPHA7Q15375 998 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 FSCN1Q16658 493 aaKnown RBP3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 DUOXA2Q1HG44 320 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 UVSSAQ2YD98 709 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 ANO4Q32M45 955 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 RTP2Q5QGT7 225 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 NOL9Q5SY16 702 aaKnown RBP3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 NUTM2GQ5VZR2 741 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 CC2D1AQ6P1N0 951 aaPredicted RBP3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 LILRA6Q6PI73 481 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 FRMD7Q6ZUT3 714 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 OVCH2Q7RTZ1 564 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 CATIPQ7Z7H3 387 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 DPP9Q86TI2 863 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 ZC3H7AQ8IWR0 971 aaKnown RBP3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 LINC00116Q8NCU8 138 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 DEPTORQ8TB45 409 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 JADE3Q92613 823 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 PPP1R14AQ96A00 147 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 ACDQ96AP0 544 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 C1GALT1C1Q96EU7 318 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 MAML3Q96JK9 1138 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 C16orf92Q96LL3 132 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 TBATAQ96M53 351 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 UHRF1Q96T88 793 aaPredicted RBP3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 CDX2Q99626 313 aaPredicted RBP3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 RNF38Q9H0F5 515 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 MRPL18Q9H0U6 180 aaKnown RBP3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 SMURF1Q9HCE7 757 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 AGO4Q9HCK5 861 aaKnown RBP3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 CCM2LQ9NUG4 571 aaPredicted RBP3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 FAM86C1Q9NVL1 165 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 THG1LQ9NWX6 298 aaKnown RBP3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 GFOD1Q9NXC2 390 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 PUF60Q9UHX1 559 aaKnown RBP3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 FBXO9Q9UK97 447 aaPredicted RBP3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 CBLCQ9ULV8 474 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 L1RE1Q9UN81 338 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 GTF2A1LQ9UNN4 478 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 WASF3Q9UPY6 502 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 COQ6Q9Y2Z9 468 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 FAM186AA6NE01 2351 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 DNAH12Q6ZR08 3092 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 ABCC6O95255 1503 aa3.03□□□□□ -1.92
CKS1BP2-201ENST00000497342 WNK3Q9BYP7 1800 aa3.03□□□□□ -1.93
CKS1BP2-201ENST00000497342 SMG6Q86US8 1419 aaKnown RBP3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 NSD3Q9BZ95 1437 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 SCN11AQ9UI33 1791 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 DOPEY1Q5JWR5 2465 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 GVINP1Q7Z2Y8 2422 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 NSD2O96028 1365 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 CACNA1HO95180 2353 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 ITPR3Q14573 2671 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 AKAP11Q9UKA4 1901 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 DICER1Q9UPY3 1922 aaKnown RBP3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 A0A0A0MRY4 1105 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 A0A1B0GVC2 190 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 RASA4BC9J798 803 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 H3BM21 787 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 RNF225M0QZC1 329 aaPredicted RBP3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 ST8SIA5O15466 376 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 FGF10O15520 208 aaPredicted RBP3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 RASA4O43374 803 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 CLASP2O75122 1294 aaKnown RBP3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 VAMP4O75379 141 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 OFD1O75665 1012 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 MT-CO1P00395 513 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 AMY2AP04746 511 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 CYP17A1P05093 508 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 CT47B1P0C2W7 299 aaPredicted RBP3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 HSD3B1P14060 373 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 VAV1P15498 845 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 AMY2BP19961 511 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 ENPP1P22413 925 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 CCND1P24385 295 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 GRK2P25098 689 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 GRK3P35626 688 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 HALP42357 657 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 ASPAP45381 313 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 KCNJ6P48051 423 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 CCT5P48643 541 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 USP11P51784 963 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 EPHA5P54756 1037 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 MRPS9P82933 396 aaKnown RBP3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 ADCY1Q08828 1119 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 NMIQ13287 307 aaPredicted RBP3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 PDCD1Q15116 288 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 GPR19Q15760 415 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 ARHGAP29Q52LW3 1261 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 CCDC70Q6NSX1 233 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 TLDC1Q6P9B6 456 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms