RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 CPEP16870 476 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 BUD31P41223 144 aaPredicted RBP6.79□□□□□ -1.32
SNX13-211ENST00000496855 SESN3P58005 492 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 NFKB2Q00653 900 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 ICAM4Q14773 271 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 CLRN3Q8NCR9 226 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 HIST1H2AHQ96KK5 128 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 HIST1H2AJQ99878 128 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 PPP2R3BQ9Y5P8 575 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 SBNO2Q9Y2G9 1366 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 C2orf78A6NCI8 922 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 FOXS1O43638 330 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 MAGEA10P43363 369 aaPredicted RBP6.79□□□□□ -1.32
SNX13-211ENST00000496855 MANFP55145 182 aaKnown RBP6.79□□□□□ -1.32
SNX13-211ENST00000496855 STAT4Q14765 748 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 CDYL2Q8N8U2 506 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 CHST13Q8NET6 341 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 GCDHQ92947 438 aaPredicted RBP6.79□□□□□ -1.32
SNX13-211ENST00000496855 SLC7A6OSQ96CW6 309 aaPredicted RBP6.79□□□□□ -1.32
SNX13-211ENST00000496855 C8orf49Q96NF6 230 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 ANO3Q9BYT9 981 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 WNT8AQ9H1J5 351 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 SPC25Q9HBM1 224 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 CD248Q9HCU0 757 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 KCNG1Q9UIX4 513 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 ST6GALNAC2Q9UJ37 374 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 ZFR2Q9UPR6 939 aaKnown RBP6.79□□□□□ -1.32
SNX13-211ENST00000496855 PCDHB6Q9Y5E3 794 aa6.79□□□□□ -1.32
SNX13-211ENST00000496855 A0A0A6YYK5 440 aaPredicted RBP6.78□□□□□ -1.32
SNX13-211ENST00000496855 PMS2P1A4D2B8 440 aa6.78□□□□□ -1.32
SNX13-211ENST00000496855 SLC26A4O43511 780 aa6.78□□□□□ -1.32
SNX13-211ENST00000496855 ADCY7P51828 1080 aa6.78□□□□□ -1.32
SNX13-211ENST00000496855 ATP2C1P98194 919 aaPredicted RBP6.78□□□□□ -1.32
SNX13-211ENST00000496855 DUSP8Q13202 625 aa6.78□□□□□ -1.32
SNX13-211ENST00000496855 CLEC14AQ86T13 490 aa6.78□□□□□ -1.32
SNX13-211ENST00000496855 SOX7Q9BT81 388 aa6.78□□□□□ -1.32
SNX13-211ENST00000496855 OSBPL6Q9BZF3 934 aa6.78□□□□□ -1.32
SNX13-211ENST00000496855 SLC6A15Q9H2J7 730 aa6.78□□□□□ -1.32
SNX13-211ENST00000496855 TOPORSQ9NS56 1045 aaPredicted RBP6.78□□□□□ -1.32
SNX13-211ENST00000496855 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.78□□□□□ -1.32
SNX13-211ENST00000496855 RBM8AQ9Y5S9 174 aaKnown RBP6.78□□□□□ -1.32
SNX13-211ENST00000496855 NUMBLQ9Y6R0 609 aa6.78□□□□□ -1.32
SNX13-211ENST00000496855 DNAJC6O75061 913 aa6.77□□□□□ -1.33
SNX13-211ENST00000496855 HNRNPLP14866 589 aaKnown RBP eCLIP6.77□□□□□ -1.332e-7■□□□□ 10
SNX13-211ENST00000496855 POU3F3P20264 500 aaPredicted RBP6.77□□□□□ -1.33
SNX13-211ENST00000496855 PDCD1Q15116 288 aa6.77□□□□□ -1.33
SNX13-211ENST00000496855 MAN2A1Q16706 1144 aa6.77□□□□□ -1.33
SNX13-211ENST00000496855 RNF187Q5TA31 235 aaPredicted RBP6.77□□□□□ -1.33
SNX13-211ENST00000496855 PLA2G15Q8NCC3 412 aa6.77□□□□□ -1.33
SNX13-211ENST00000496855 Q8TCH9 128 aa6.77□□□□□ -1.33
SNX13-211ENST00000496855 PLA2G12BQ9BX93 195 aa6.77□□□□□ -1.33
SNX13-211ENST00000496855 FAM126AQ9BYI3 521 aaPredicted RBP6.77□□□□□ -1.33
SNX13-211ENST00000496855 TMPRSS11EQ9UL52 423 aa6.77□□□□□ -1.33
SNX13-211ENST00000496855 USP18Q9UMW8 372 aa6.77□□□□□ -1.33
SNX13-211ENST00000496855 DAPK3O43293 454 aa6.76□□□□□ -1.33
SNX13-211ENST00000496855 ZNF623O75123 536 aa6.76□□□□□ -1.33
SNX13-211ENST00000496855 CLEC2LP0C7M8 214 aa6.76□□□□□ -1.33
SNX13-211ENST00000496855 RPS19P39019 145 aaKnown RBP6.76□□□□□ -1.33
SNX13-211ENST00000496855 ADAM17P78536 824 aa6.76□□□□□ -1.33
SNX13-211ENST00000496855 TMPRSS15P98073 1019 aa6.76□□□□□ -1.33
SNX13-211ENST00000496855 TCIRG1Q13488 830 aa6.76□□□□□ -1.33
SNX13-211ENST00000496855 LHFPL2Q6ZUX7 228 aa6.76□□□□□ -1.33
SNX13-211ENST00000496855 GPR135Q8IZ08 494 aa6.76□□□□□ -1.33
SNX13-211ENST00000496855 FUKQ8N0W3 1084 aa6.76□□□□□ -1.33
SNX13-211ENST00000496855 SHCBP1Q8NEM2 672 aa6.76□□□□□ -1.33
SNX13-211ENST00000496855 PPP1R14CQ8TAE6 165 aa6.76□□□□□ -1.33
SNX13-211ENST00000496855 RABGGTAQ92696 567 aa6.76□□□□□ -1.33
SNX13-211ENST00000496855 WWC2-AS2Q96NR7 200 aa6.76□□□□□ -1.33
SNX13-211ENST00000496855 KRTAP3-1Q9BYR8 98 aa6.76□□□□□ -1.33
SNX13-211ENST00000496855 GPR39O43194 453 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 RAD17O75943 681 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 FSBPO95073 299 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 ADRB1P08588 477 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 GPR15P49685 360 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 BPIFB4P59827 614 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 ACAP1Q15027 740 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 IQSEC1Q6DN90 963 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 CCDC62Q6P9F0 684 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 ZNF662Q6ZS27 426 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 LYSMD2Q8IV50 215 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 ANKRD53Q8N9V6 530 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 WDR66Q8TBY9 1149 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 GAB3Q8WWW8 586 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 RSAD2Q8WXG1 361 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 OR14A2Q96R54 314 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 C1QTNF3Q9BXJ4 246 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 NELFAQ9H3P2 528 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.75□□□□□ -1.33
SNX13-211ENST00000496855 SLC30A1Q9Y6M5 507 aa6.75□□□□□ -1.33
SNX13-211ENST00000496855 CANXP27824 592 aaKnown RBP6.74□□□□□ -1.33
SNX13-211ENST00000496855 ADAM8P78325 824 aa6.74□□□□□ -1.33
SNX13-211ENST00000496855 RIN1Q13671 783 aa6.74□□□□□ -1.33
SNX13-211ENST00000496855 SAFB2Q14151 953 aaKnown RBP eCLIP6.74□□□□□ -1.33
SNX13-211ENST00000496855 CCDC178Q5BJE1 867 aa6.74□□□□□ -1.33
SNX13-211ENST00000496855 PITRM1Q5JRX3 1037 aa6.74□□□□□ -1.33
SNX13-211ENST00000496855 ATL2Q8NHH9 583 aa6.74□□□□□ -1.33
SNX13-211ENST00000496855 DVL3Q92997 716 aaPredicted RBP6.74□□□□□ -1.33
SNX13-211ENST00000496855 RPL10LQ96L21 214 aaKnown RBP6.74□□□□□ -1.33
SNX13-211ENST00000496855 ACAP3Q96P50 834 aa6.74□□□□□ -1.33
SNX13-211ENST00000496855 DEF6Q9H4E7 631 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms