RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 XKR9Q5GH70 373 aa21.82■■□□□ 1.08
COL20A1-208ENST00000496810 LRRC55Q6ZSA7 311 aa21.82■■□□□ 1.08
COL20A1-208ENST00000496810 ZNF410Q86VK4 478 aa21.82■■□□□ 1.08
COL20A1-208ENST00000496810 ZNF710Q8N1W2 664 aa21.82■■□□□ 1.08
COL20A1-208ENST00000496810 SPPL3Q8TCT6 385 aa21.82■■□□□ 1.08
COL20A1-208ENST00000496810 SLC7A3Q8WY07 619 aa21.82■■□□□ 1.08
COL20A1-208ENST00000496810 P2RX5Q93086 422 aa21.82■■□□□ 1.08
COL20A1-208ENST00000496810 CASD1Q96PB1 797 aa21.82■■□□□ 1.08
COL20A1-208ENST00000496810 CWH43Q9H720 699 aa21.82■■□□□ 1.08
COL20A1-208ENST00000496810 ELAC1Q9H777 363 aaKnown RBP21.82■■□□□ 1.08
COL20A1-208ENST00000496810 MINDY3Q9H8M7 445 aa21.82■■□□□ 1.08
COL20A1-208ENST00000496810 TYW1Q9NV66 732 aaKnown RBP21.82■■□□□ 1.08
COL20A1-208ENST00000496810 H3BQ06 376 aaPredicted RBP21.81■■□□□ 1.08
COL20A1-208ENST00000496810 TNFRSF10AO00220 468 aa21.81■■□□□ 1.08
COL20A1-208ENST00000496810 DKC1O60832 514 aaKnown RBP eCLIP21.81■■□□□ 1.08
COL20A1-208ENST00000496810 ZSCAN20P17040 1043 aaPredicted RBP21.81■■□□□ 1.08
COL20A1-208ENST00000496810 PBX3P40426 434 aa21.81■■□□□ 1.08
COL20A1-208ENST00000496810 HMGN5P82970 282 aaKnown RBP21.81■■□□□ 1.08
COL20A1-208ENST00000496810 HYAL1Q12794 435 aa21.81■■□□□ 1.08
COL20A1-208ENST00000496810 COL19A1Q14993 1142 aa21.81■■□□□ 1.08
COL20A1-208ENST00000496810 ZNF174Q15697 407 aa21.81■■□□□ 1.08
COL20A1-208ENST00000496810 ADGRD2Q7Z7M1 963 aa21.81■■□□□ 1.08
COL20A1-208ENST00000496810 ZNF598Q86UK7 904 aaKnown RBP21.81■■□□□ 1.08
COL20A1-208ENST00000496810 PRPF31Q8WWY3 499 aaKnown RBP21.81■■□□□ 1.08
COL20A1-208ENST00000496810 LMAN2LQ9H0V9 348 aa21.81■■□□□ 1.08
COL20A1-208ENST00000496810 PIN4Q9Y237 131 aaKnown RBP21.81■■□□□ 1.08
COL20A1-208ENST00000496810 MEIS3P2A8K0S8 358 aa21.8■■□□□ 1.08
COL20A1-208ENST00000496810 RFC5P40937 340 aa21.8■■□□□ 1.08
COL20A1-208ENST00000496810 LONRF3Q496Y0 759 aa21.8■■□□□ 1.08
COL20A1-208ENST00000496810 FAM184AQ8NB25 1140 aa21.8■■□□□ 1.08
COL20A1-208ENST00000496810 COLGALT1Q8NBJ5 622 aa21.8■■□□□ 1.08
COL20A1-208ENST00000496810 TMEM117Q9H0C3 514 aa21.8■■□□□ 1.08
COL20A1-208ENST00000496810 FOXP1Q9H334 677 aaPredicted RBP21.8■■□□□ 1.08
COL20A1-208ENST00000496810 A0A0U1RQF3 1178 aa21.79■■□□□ 1.08
COL20A1-208ENST00000496810 LINC01565O15544 149 aa21.79■■□□□ 1.08
COL20A1-208ENST00000496810 SRGAP2CP0DJJ0 459 aa21.79■■□□□ 1.08
COL20A1-208ENST00000496810 SPATA31C1P0DKV0 1188 aa21.79■■□□□ 1.08
COL20A1-208ENST00000496810 SFPQP23246 707 aaKnown RBP eCLIP21.79■■□□□ 1.08
COL20A1-208ENST00000496810 LTBRP36941 435 aa21.79■■□□□ 1.08
COL20A1-208ENST00000496810 DLX2Q07687 328 aaPredicted RBP21.79■■□□□ 1.08
COL20A1-208ENST00000496810 LAMTOR4Q0VGL1 99 aa21.79■■□□□ 1.08
COL20A1-208ENST00000496810 SPOUT1Q5T280 376 aaKnown RBP21.79■■□□□ 1.08
COL20A1-208ENST00000496810 NOSTRINQ8IVI9 506 aa21.79■■□□□ 1.08
COL20A1-208ENST00000496810 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.79■■□□□ 1.08
COL20A1-208ENST00000496810 HELQQ8TDG4 1101 aa21.79■■□□□ 1.08
COL20A1-208ENST00000496810 PIGOQ8TEQ8 1089 aa21.79■■□□□ 1.08
COL20A1-208ENST00000496810 POF1BQ8WVV4 589 aa21.79■■□□□ 1.08
COL20A1-208ENST00000496810 PSPC1Q8WXF1 523 aaKnown RBP21.79■■□□□ 1.08
COL20A1-208ENST00000496810 LPPQ93052 612 aa21.79■■□□□ 1.08
COL20A1-208ENST00000496810 PABPC5Q96DU9 382 aaKnown RBP21.79■■□□□ 1.08
COL20A1-208ENST00000496810 JPH2Q9BR39 696 aaPredicted RBP21.79■■□□□ 1.08
COL20A1-208ENST00000496810 TBX10O75333 385 aa21.78■■□□□ 1.08
COL20A1-208ENST00000496810 MED24O75448 989 aa21.78■■□□□ 1.08
COL20A1-208ENST00000496810 LYPLA2O95372 231 aa21.78■■□□□ 1.08
COL20A1-208ENST00000496810 IL9P15248 144 aa21.78■■□□□ 1.08
COL20A1-208ENST00000496810 PHKA2P46019 1235 aa21.78■■□□□ 1.08
COL20A1-208ENST00000496810 LEXMQ3ZCV2 418 aa21.78■■□□□ 1.08
COL20A1-208ENST00000496810 TTC38Q5R3I4 469 aa21.78■■□□□ 1.08
COL20A1-208ENST00000496810 FAM43BQ6ZT52 329 aaPredicted RBP21.78■■□□□ 1.08
COL20A1-208ENST00000496810 EP400NLQ6ZTU2 488 aa21.78■■□□□ 1.08
COL20A1-208ENST00000496810 CATSPER4Q7RTX7 472 aa21.78■■□□□ 1.08
COL20A1-208ENST00000496810 FERMT3Q86UX7 667 aa21.78■■□□□ 1.08
COL20A1-208ENST00000496810 NEK9Q8TD19 979 aa21.78■■□□□ 1.08
COL20A1-208ENST00000496810 ASAP3Q8TDY4 903 aa21.78■■□□□ 1.08
COL20A1-208ENST00000496810 TMX3Q96JJ7 454 aa21.78■■□□□ 1.08
COL20A1-208ENST00000496810 MTRQ99707 1265 aa21.78■■□□□ 1.08
COL20A1-208ENST00000496810 CLDND1Q9NY35 253 aa21.78■■□□□ 1.08
COL20A1-208ENST00000496810 PPME1Q9Y570 386 aa21.78■■□□□ 1.08
COL20A1-208ENST00000496810 OR52Z1P0C646 297 aa21.77■■□□□ 1.08
COL20A1-208ENST00000496810 RARRES1P49788 294 aa21.77■■□□□ 1.08
COL20A1-208ENST00000496810 TOB1P50616 345 aaPredicted RBP21.77■■□□□ 1.08
COL20A1-208ENST00000496810 TWF2Q6IBS0 349 aaKnown RBP21.77■■□□□ 1.08
COL20A1-208ENST00000496810 POTEGQ6S5H5 508 aa21.77■■□□□ 1.08
COL20A1-208ENST00000496810 OTUD6AQ7L8S5 288 aa21.77■■□□□ 1.08
COL20A1-208ENST00000496810 LRRC43Q8N309 656 aa21.77■■□□□ 1.08
COL20A1-208ENST00000496810 RNF149Q8NC42 400 aa21.77■■□□□ 1.08
COL20A1-208ENST00000496810 AGPAT5Q9NUQ2 364 aa21.77■■□□□ 1.08
COL20A1-208ENST00000496810 FGF18O76093 207 aa21.76■■□□□ 1.07
COL20A1-208ENST00000496810 TECP42680 631 aa21.76■■□□□ 1.07
COL20A1-208ENST00000496810 CDC42EP1Q00587 391 aa21.76■■□□□ 1.07
COL20A1-208ENST00000496810 CTC1Q2NKJ3 1217 aa21.76■■□□□ 1.07
COL20A1-208ENST00000496810 NAALADL2Q58DX5 795 aa21.76■■□□□ 1.07
COL20A1-208ENST00000496810 CATSPER3Q86XQ3 398 aa21.76■■□□□ 1.07
COL20A1-208ENST00000496810 TBC1D32Q96NH3 1257 aa21.76■■□□□ 1.07
COL20A1-208ENST00000496810 CD320Q9NPF0 282 aa21.76■■□□□ 1.07
COL20A1-208ENST00000496810 FAM105AQ9NUU6 356 aa21.76■■□□□ 1.07
COL20A1-208ENST00000496810 DACT1Q9NYF0 836 aa21.76■■□□□ 1.07
COL20A1-208ENST00000496810 TRIOO75962 3097 aa21.76■■□□□ 1.07
COL20A1-208ENST00000496810 ST18O60284 1047 aa21.75■■□□□ 1.07
COL20A1-208ENST00000496810 USO1O60763 962 aaKnown RBP21.75■■□□□ 1.07
COL20A1-208ENST00000496810 U2AF2P26368 475 aaKnown RBP eCLIP21.75■■□□□ 1.07
COL20A1-208ENST00000496810 HOXA11P31270 313 aaPredicted RBP21.75■■□□□ 1.07
COL20A1-208ENST00000496810 CAPSQ13938 189 aa21.75■■□□□ 1.07
COL20A1-208ENST00000496810 CLUL1Q15846 466 aa21.75■■□□□ 1.07
COL20A1-208ENST00000496810 THNSL1Q8IYQ7 743 aa21.75■■□□□ 1.07
COL20A1-208ENST00000496810 ABI1Q8IZP0 508 aa21.75■■□□□ 1.07
COL20A1-208ENST00000496810 C4orf32Q8N8J7 132 aa21.75■■□□□ 1.07
COL20A1-208ENST00000496810 IGFLR1Q9H665 355 aa21.75■■□□□ 1.07
COL20A1-208ENST00000496810 GPRC5CQ9NQ84 441 aa21.75■■□□□ 1.07
COL20A1-208ENST00000496810 CHST12Q9NRB3 414 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms