RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 KRT76Q01546 638 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 UBXN2BQ14CS0 331 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 LPAL2Q16609 132 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 MARCH8Q5T0T0 291 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 LRSAM1Q6UWE0 723 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 ADGRF4Q8IZF3 695 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 VPS52Q8N1B4 723 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 SLC39A11Q8N1S5 342 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 TTC14Q96N46 770 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 SEMA4GQ9NTN9 838 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 TCP11L1Q9NUJ3 509 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 EPS15L1Q9UBC2 864 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 GINS2Q9Y248 185 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 LOXHD1Q8IVV2 1947 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 KDM3AQ9Y4C1 1321 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 KANSL1LA0AUZ9 987 aa11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 RRN3P2A6NIE6 340 aa11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 C9IYK1 514 aa11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 RETP07949 1114 aa11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 BRD2P25440 801 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 METAP2P50579 478 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 GHRHRQ02643 423 aa11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 LRRC55Q6ZSA7 311 aa11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 KDF1Q8NAX2 398 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 FEZF2Q8TBJ5 459 aa11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 SLC22A17Q8WUG5 538 aa11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 AUTS2Q8WXX7 1259 aa11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 TNPO1Q92973 898 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 ZBTB10Q96DT7 871 aa11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 SEC62Q99442 399 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 AMNQ9BXJ7 453 aa11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 FAM126AQ9BYI3 521 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 ZBP1Q9H171 429 aa11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 ELAC1Q9H777 363 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 SLC2A4RGQ9NR83 387 aa11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 ECHDC1Q9NTX5 307 aa11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 ANAPC4Q9UJX5 808 aa11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 FLNBO75369 2602 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 CACNA1IQ9P0X4 2223 aa11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 KAT6AQ92794 2004 aa11.06□□□□□ -0.64
SMARCAL1-213ENST00000496037 TMEM8BA6NDV4 472 aa11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 SPATA31C2B4DYI2 1134 aa11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 GPR182O15218 404 aa11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 N4BP1O75113 896 aaKnown RBP11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 ALDH7A1P49419 539 aaKnown RBP11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 RING1Q06587 406 aa11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 CSRP2Q16527 193 aa11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 TSSK4Q6SA08 328 aa11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 PRR23BQ6ZRT6 265 aa11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 FCHSD1Q86WN1 690 aa11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 SAMD3Q8N6K7 520 aa11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 GIMAP8Q8ND71 665 aaPredicted RBP11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 NBEAQ8NFP9 2946 aa11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 NELL1Q92832 810 aa11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 GPATCH3Q96I76 525 aa11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 CASD1Q96PB1 797 aa11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 INPP4AQ96PE3 977 aaPredicted RBP11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 IRAK3Q9Y616 596 aa11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 CLUHO75153 1309 aa11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 PATJQ8NI35 1801 aa11.05□□□□□ -0.64
SMARCAL1-213ENST00000496037 LOC400499M0QZD8 3231 aa11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 C3orf80F5H4A9 247 aa11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 GCOM1H8Y6P7 765 aaPredicted RBP11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 OPLAHO14841 1288 aa11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 GDF9O60383 454 aa11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 ZIC2O95409 532 aaPredicted RBP11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 POLR2MP0CAP2 368 aa11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 CTSAP10619 480 aa11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 POLGP54098 1239 aaPredicted RBP11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 ASPRV1Q53RT3 343 aa11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 ELMSAN1Q6PJG2 1045 aa11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 NME8Q8N427 588 aa11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 CELF5Q8N6W0 485 aaKnown RBP11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 SENP7Q9BQF6 1050 aa11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 MYL10Q9BUA6 226 aa11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 EMILIN2Q9BXX0 1053 aa11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 OSBPL6Q9BZF3 934 aa11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 SMARCAD1Q9H4L7 1026 aa11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 VAT1LQ9HCJ6 419 aa11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 WDR6Q9NNW5 1121 aaKnown RBP11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 ST3GAL5Q9UNP4 418 aa11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 NOC2LQ9Y3T9 749 aaKnown RBP11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 TELO2Q9Y4R8 837 aa11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 PCDHA2Q9Y5H9 948 aa11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 SMG1Q96Q15 3661 aaKnown RBP11.04□□□□□ -0.64
SMARCAL1-213ENST00000496037 MIA3Q5JRA6 1907 aa11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 FAM170BA6NMN3 283 aa11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 FGRP09769 529 aa11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 RLBP1P12271 317 aa11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 INSRRP14616 1297 aa11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 KLRC2P26717 231 aa11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 NRLP54845 237 aa11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 PRKCQQ04759 706 aa11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 SEMA3FQ13275 785 aa11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 SNW1Q13573 536 aaKnown RBP11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 MLF2Q15773 248 aaPredicted RBP11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 AASDHQ4L235 1098 aaPredicted RBP11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 CMASQ8NFW8 434 aaPredicted RBP11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 SEPT1Q8WYJ6 367 aa11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 MYADMQ96S97 322 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms