RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 WDR75Q8IWA0 830 aaKnown RBP5.2□□□□□ -1.58
VPS52-222ENST00000495981 TRIM59Q8IWR1 403 aa5.2□□□□□ -1.58
VPS52-222ENST00000495981 ANKRD13CQ8N6S4 541 aa5.2□□□□□ -1.58
VPS52-222ENST00000495981 GOLGA6L1Q8N7Z2 621 aa5.2□□□□□ -1.58
VPS52-222ENST00000495981 DNAJB8Q8NHS0 232 aa5.2□□□□□ -1.58
VPS52-222ENST00000495981 TBC1D22AQ8WUA7 517 aa5.2□□□□□ -1.58
VPS52-222ENST00000495981 BTN2A2Q8WVV5 523 aa5.2□□□□□ -1.58
VPS52-222ENST00000495981 C1orf159Q96HA4 380 aa5.2□□□□□ -1.58
VPS52-222ENST00000495981 GSX1Q9H4S2 264 aaPredicted RBP5.2□□□□□ -1.58
VPS52-222ENST00000495981 LRP2BPQ9P2M1 347 aa5.2□□□□□ -1.58
VPS52-222ENST00000495981 NDOR1Q9UHB4 597 aa5.2□□□□□ -1.58
VPS52-222ENST00000495981 ZNF112Q9UJU3 913 aa5.2□□□□□ -1.58
VPS52-222ENST00000495981 AK9Q5TCS8 1911 aa5.2□□□□□ -1.58
VPS52-222ENST00000495981 ATRXP46100 2492 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 KRBA1A5PL33 1030 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 H3BM21 787 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 NPTXRO95502 500 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 BPIP17213 487 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 CD247P20963 164 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 CD68P34810 354 aaPredicted RBP5.19□□□□□ -1.58
VPS52-222ENST00000495981 NEK2P51955 445 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 GFRA1P56159 465 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 RTP1P59025 263 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 TTLL4Q14679 1199 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 EXOSC6Q5RKV6 272 aaKnown RBP5.19□□□□□ -1.58
VPS52-222ENST00000495981 TREML2Q5T2D2 321 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 DENND5AQ6IQ26 1287 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 HHIPL2Q6UWX4 724 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 CCDC144CPQ8IYA2 1237 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 ARHGEF39Q8N4T4 335 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 WDR66Q8TBY9 1149 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 ZNF384Q8TF68 577 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 PPP1R14AQ96A00 147 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 ISL2Q96A47 359 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 ACDQ96AP0 544 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 TIFAQ96CG3 184 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 RCC1LQ96I51 464 aaKnown RBP5.19□□□□□ -1.58
VPS52-222ENST00000495981 IPO9Q96P70 1041 aaKnown RBP5.19□□□□□ -1.58
VPS52-222ENST00000495981 PARK7Q99497 189 aaKnown RBP5.19□□□□□ -1.58
VPS52-222ENST00000495981 USP44Q9H0E7 712 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.19□□□□□ -1.58
VPS52-222ENST00000495981 GP6Q9HCN6 339 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 CRTAC1Q9NQ79 661 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 SLC5A4Q9NY91 659 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 C9orf78Q9NZ63 289 aaPredicted RBP5.19□□□□□ -1.58
VPS52-222ENST00000495981 WHRNQ9P202 907 aa5.19□□□□□ -1.58
VPS52-222ENST00000495981 PDS5AQ29RF7 1337 aaKnown RBP5.19□□□□□ -1.58
VPS52-222ENST00000495981 PARP14Q460N5 1801 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 DOCK3Q8IZD9 2030 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 A0A0G2JLL6 359 aaPredicted RBP5.18□□□□□ -1.58
VPS52-222ENST00000495981 TCRBV16S1A1N1A0A5B0 115 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 SPDYE3A6NKU9 549 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 PI4K2BG5E9Z4 385 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 EYA2O00167 538 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 KPNA6O60684 536 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 CYP2B6P20813 491 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 GBP1P32455 592 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 PHKA1P46020 1223 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 ID4P47928 161 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 GABREP78334 506 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 SKOR2Q2VWA4 1001 aaPredicted RBP5.18□□□□□ -1.58
VPS52-222ENST00000495981 HP1BP3Q5SSJ5 553 aaPredicted RBP5.18□□□□□ -1.58
VPS52-222ENST00000495981 RNF219Q5W0B1 726 aaPredicted RBP5.18□□□□□ -1.58
VPS52-222ENST00000495981 KRT40Q6A162 431 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 WWC2Q6AWC2 1192 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 CCSAPQ6IQ19 270 aaPredicted RBP5.18□□□□□ -1.58
VPS52-222ENST00000495981 CDC42EP5Q6NZY7 148 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 ABHD17CQ6PCB6 329 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 CHSY3Q70JA7 882 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 C16orf59Q7L2K0 433 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 PRRT2Q7Z6L0 340 aaPredicted RBP5.18□□□□□ -1.58
VPS52-222ENST00000495981 C14orf80Q86SX3 495 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 MAP4K3Q8IVH8 894 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 ZFPM1Q8IX07 1006 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 DMRTC2Q8IXT2 367 aaPredicted RBP5.18□□□□□ -1.58
VPS52-222ENST00000495981 TRPV1Q8NER1 839 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 ADCY4Q8NFM4 1077 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 MORC4Q8TE76 937 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 COG1Q8WTW3 980 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 SSH1Q8WYL5 1049 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 IRF7Q92985 503 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 BRF1Q92994 677 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 MRIQ9BWK5 157 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 ZNF341Q9BYN7 854 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 CDH19Q9H159 772 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 PDLIM7Q9NR12 457 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 CHST12Q9NRB3 414 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 TMOD2Q9NZR1 351 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 ZIM2Q9NZV7 527 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 CGGBP1Q9UFW8 167 aaPredicted RBP5.18□□□□□ -1.58
VPS52-222ENST00000495981 ATP11BQ9Y2G3 1177 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 CHD6Q8TD26 2715 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 TCF20Q9UGU0 1960 aaKnown RBP5.18□□□□□ -1.58
VPS52-222ENST00000495981 WDR87Q6ZQQ6 2873 aa5.18□□□□□ -1.58
VPS52-222ENST00000495981 MEGF11A6BM72 1044 aa5.17□□□□□ -1.58
VPS52-222ENST00000495981 RFXAPO00287 272 aa5.17□□□□□ -1.58
VPS52-222ENST00000495981 NEMP1O14524 444 aa5.17□□□□□ -1.58
VPS52-222ENST00000495981 GABRDO14764 452 aa5.17□□□□□ -1.58
VPS52-222ENST00000495981 PRPF3O43395 683 aaKnown RBP5.17□□□□□ -1.58
VPS52-222ENST00000495981 CIAO1O76071 339 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms