RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 IRS1P35568 1242 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 FOSBP53539 338 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 GUCY1B3Q02153 619 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 CYP4A11Q02928 519 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 CTTNQ14247 550 aaKnown RBP8.07□□□□□ -1.12
VPS52-221ENST00000495755 PUS10Q3MIT2 529 aaKnown RBP8.07□□□□□ -1.12
VPS52-221ENST00000495755 CLLU1OSQ5K130 101 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 PTCRAQ6ISU1 281 aaPredicted RBP8.07□□□□□ -1.12
VPS52-221ENST00000495755 OTUD6AQ7L8S5 288 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 RHPN2Q8IUC4 686 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 TPH2Q8IWU9 490 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 POF1BQ8WVV4 589 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 PRPF31Q8WWY3 499 aaKnown RBP8.07□□□□□ -1.12
VPS52-221ENST00000495755 SCLT1Q96NL6 688 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 EIF2AK1Q9BQI3 630 aaKnown RBP8.07□□□□□ -1.12
VPS52-221ENST00000495755 INO80BQ9C086 356 aaPredicted RBP8.07□□□□□ -1.12
VPS52-221ENST00000495755 TMEM60Q9H2L4 133 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 TTC12Q9H892 705 aaPredicted RBP8.07□□□□□ -1.12
VPS52-221ENST00000495755 IFT122Q9HBG6 1241 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 SH2B1Q9NRF2 756 aaPredicted RBP8.07□□□□□ -1.12
VPS52-221ENST00000495755 AAASQ9NRG9 546 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 DACT1Q9NYF0 836 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 HCSTQ9UBK5 93 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 PCDHB12Q9Y5F1 795 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 COL4A3BPQ9Y5P4 624 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 FNDC1Q4ZHG4 1894 aaPredicted RBP8.06□□□□□ -1.12
VPS52-221ENST00000495755 ASAP2O43150 1006 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 GAS2O43903 313 aaKnown RBP8.06□□□□□ -1.12
VPS52-221ENST00000495755 ZNF623O75123 536 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 FGF18O76093 207 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 XRCC6P12956 609 aaKnown RBP eCLIP8.06□□□□□ -1.12
VPS52-221ENST00000495755 LAG3P18627 525 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 SFPQP23246 707 aaKnown RBP eCLIP8.06□□□□□ -1.12
VPS52-221ENST00000495755 GTF2F1P35269 517 aaKnown RBP eCLIP8.06□□□□□ -1.12
VPS52-221ENST00000495755 TXKP42681 527 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 PHKA2P46019 1235 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 POLGP54098 1239 aaPredicted RBP8.06□□□□□ -1.12
VPS52-221ENST00000495755 PLCB3Q01970 1234 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 UBE3AQ05086 875 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 DLX2Q07687 328 aaPredicted RBP8.06□□□□□ -1.12
VPS52-221ENST00000495755 LAMTOR4Q0VGL1 99 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 ADAM15Q13444 863 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 EMC2Q15006 297 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 SAFBQ15424 915 aaKnown RBP eCLIP8.06□□□□□ -1.12
VPS52-221ENST00000495755 CSPP1Q1MSJ5 1256 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 XKR9Q5GH70 373 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 SPOUT1Q5T280 376 aaKnown RBP8.06□□□□□ -1.12
VPS52-221ENST00000495755 ADGRD2Q7Z7M1 963 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 FAM178BQ8IXR5 827 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 COLGALT1Q8NBJ5 622 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 FBXO18Q8NFZ0 1043 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 PSPC1Q8WXF1 523 aaKnown RBP8.06□□□□□ -1.12
VPS52-221ENST00000495755 TMEM143Q96AN5 459 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 C8orf76Q96K31 380 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 NLRP4Q96MN2 994 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 FOXP1Q9H334 677 aaPredicted RBP8.06□□□□□ -1.12
VPS52-221ENST00000495755 CD320Q9NPF0 282 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 XPNPEP1Q9NQW7 623 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 ANKEF1Q9NU02 776 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 CLDND1Q9NY35 253 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 KIAA1671Q9BY89 1806 aa8.06□□□□□ -1.12
VPS52-221ENST00000495755 ATG2AQ2TAZ0 1938 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 FSCN2O14926 492 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 LINC01565O15544 149 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 SRGAP2CP0DJJ0 459 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 SPATA31C1P0DKV0 1188 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 SKIP12755 728 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 IL9P15248 144 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 ATP2B1P20020 1258 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 HOXA11P31270 313 aaPredicted RBP8.05□□□□□ -1.12
VPS52-221ENST00000495755 MCM7P33993 719 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 ARL2P36404 184 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 ERVFC1P60507 584 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 HMGN5P82970 282 aaKnown RBP8.05□□□□□ -1.12
VPS52-221ENST00000495755 ORC2Q13416 577 aaPredicted RBP8.05□□□□□ -1.12
VPS52-221ENST00000495755 KCNT2Q6UVM3 1135 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 CATSPER4Q7RTX7 472 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 SRGAP1Q7Z6B7 1085 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 MRPL10Q7Z7H8 261 aaKnown RBP8.05□□□□□ -1.12
VPS52-221ENST00000495755 FERMT3Q86UX7 667 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 ABI1Q8IZP0 508 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 LRRC43Q8N309 656 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 EFHBQ8N7U6 833 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 RNF169Q8NCN4 708 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 HELQQ8TDG4 1101 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 TCP11Q8WWU5 503 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 IGFLR1Q9H665 355 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 MINDY3Q9H8M7 445 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 TLR9Q9NR96 1032 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 BMP2KQ9NSY1 1161 aaPredicted RBP8.05□□□□□ -1.12
VPS52-221ENST00000495755 AGPAT5Q9NUQ2 364 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 PIN4Q9Y237 131 aaKnown RBP8.05□□□□□ -1.12
VPS52-221ENST00000495755 LZTS1Q9Y250 596 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 PCDHGC5Q9Y5F6 944 aa8.05□□□□□ -1.12
VPS52-221ENST00000495755 A0A087WWV3 80 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 POTEMA6NI47 508 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 TBX10O75333 385 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 OFD1O75665 1012 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 DGAT1O75907 488 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 CSPG5O95196 566 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms