RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 CAPSQ13938 189 aa21.56■■□□□ 1.04
HDAC4-212ENST00000495497 RRAGBQ5VZM2 374 aa21.56■■□□□ 1.04
HDAC4-212ENST00000495497 TMCO2Q7Z6W1 182 aaPredicted RBP21.56■■□□□ 1.04
HDAC4-212ENST00000495497 KCTD17Q8N5Z5 321 aa21.56■■□□□ 1.04
HDAC4-212ENST00000495497 RNF149Q8NC42 400 aa21.56■■□□□ 1.04
HDAC4-212ENST00000495497 BSNDQ8WZ55 320 aa21.56■■□□□ 1.04
HDAC4-212ENST00000495497 APBB2Q92870 758 aa21.56■■□□□ 1.04
HDAC4-212ENST00000495497 MINDY3Q9H8M7 445 aa21.56■■□□□ 1.04
HDAC4-212ENST00000495497 SLC4A7Q9Y6M7 1214 aa21.56■■□□□ 1.04
HDAC4-212ENST00000495497 ABHD14A-ACY1A0A1B0GW23 586 aa21.55■■□□□ 1.04
HDAC4-212ENST00000495497 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.55■■□□□ 1.04
HDAC4-212ENST00000495497 MGEA5O60502 916 aa21.55■■□□□ 1.04
HDAC4-212ENST00000495497 HIP1RO75146 1068 aa21.55■■□□□ 1.04
HDAC4-212ENST00000495497 CACNB1Q02641 598 aaPredicted RBP21.55■■□□□ 1.04
HDAC4-212ENST00000495497 MXD4Q14582 209 aaPredicted RBP21.55■■□□□ 1.04
HDAC4-212ENST00000495497 NAALADL2Q58DX5 795 aa21.55■■□□□ 1.04
HDAC4-212ENST00000495497 ARSHQ5FYA8 562 aa21.55■■□□□ 1.04
HDAC4-212ENST00000495497 RTN4RL1Q86UN2 441 aaPredicted RBP21.55■■□□□ 1.04
HDAC4-212ENST00000495497 ZNF710Q8N1W2 664 aa21.55■■□□□ 1.04
HDAC4-212ENST00000495497 LINC01599Q8WXQ3 324 aa21.55■■□□□ 1.04
HDAC4-212ENST00000495497 LARP4BQ92615 738 aaKnown RBP21.55■■□□□ 1.04
HDAC4-212ENST00000495497 MTIF3Q9H2K0 278 aaKnown RBP21.55■■□□□ 1.04
HDAC4-212ENST00000495497 CHMP5Q9NZZ3 219 aa21.55■■□□□ 1.04
HDAC4-212ENST00000495497 SOX1O00570 391 aaPredicted RBP21.54■■□□□ 1.04
HDAC4-212ENST00000495497 ENPP3O14638 875 aa21.54■■□□□ 1.04
HDAC4-212ENST00000495497 GPR182O15218 404 aa21.54■■□□□ 1.04
HDAC4-212ENST00000495497 KCNJ6P48051 423 aa21.54■■□□□ 1.04
HDAC4-212ENST00000495497 RESP18Q5W5W9 173 aa21.54■■□□□ 1.04
HDAC4-212ENST00000495497 GPBP1Q86WP2 473 aa21.54■■□□□ 1.04
HDAC4-212ENST00000495497 DAW1Q8N136 415 aa21.54■■□□□ 1.04
HDAC4-212ENST00000495497 IPO9Q96P70 1041 aaKnown RBP21.54■■□□□ 1.04
HDAC4-212ENST00000495497 SCAND2PQ9GZW5 306 aaPredicted RBP21.54■■□□□ 1.04
HDAC4-212ENST00000495497 SFI1A8K8P3 1242 aa21.53■■□□□ 1.04
HDAC4-212ENST00000495497 STAT6P42226 847 aa21.53■■□□□ 1.04
HDAC4-212ENST00000495497 MAPK7Q13164 816 aa21.53■■□□□ 1.04
HDAC4-212ENST00000495497 TFDP1Q14186 410 aa21.53■■□□□ 1.04
HDAC4-212ENST00000495497 LRIT3Q3SXY7 679 aa21.53■■□□□ 1.04
HDAC4-212ENST00000495497 CCDC73Q6ZRK6 1079 aa21.53■■□□□ 1.04
HDAC4-212ENST00000495497 LRRIQ4A6NIV6 560 aa21.52■■□□□ 1.04
HDAC4-212ENST00000495497 ATP2A2P16615 1042 aaKnown RBP21.52■■□□□ 1.04
HDAC4-212ENST00000495497 IBSPP21815 317 aaPredicted RBP21.52■■□□□ 1.04
HDAC4-212ENST00000495497 GUCY2CP25092 1073 aa21.52■■□□□ 1.04
HDAC4-212ENST00000495497 PHKA2P46019 1235 aa21.52■■□□□ 1.04
HDAC4-212ENST00000495497 PTENP60484 403 aa21.52■■□□□ 1.04
HDAC4-212ENST00000495497 FAM117BQ6P1L5 589 aa21.52■■□□□ 1.04
HDAC4-212ENST00000495497 SRGAP1Q7Z6B7 1085 aa21.52■■□□□ 1.04
HDAC4-212ENST00000495497 KIFAP3Q92845 792 aa21.52■■□□□ 1.04
HDAC4-212ENST00000495497 STK17AQ9UEE5 414 aa21.52■■□□□ 1.04
HDAC4-212ENST00000495497 LOXHD1Q8IVV2 1947 aa21.51■■□□□ 1.03
HDAC4-212ENST00000495497 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.51■■□□□ 1.03
HDAC4-212ENST00000495497 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.51■■□□□ 1.03
HDAC4-212ENST00000495497 EFCAB14O75071 495 aa21.51■■□□□ 1.03
HDAC4-212ENST00000495497 RABGGTBP53611 331 aa21.51■■□□□ 1.03
HDAC4-212ENST00000495497 E2F4Q16254 413 aa21.51■■□□□ 1.03
HDAC4-212ENST00000495497 ODR4Q5SWX8 454 aa21.51■■□□□ 1.03
HDAC4-212ENST00000495497 ADALQ6DHV7 355 aa21.51■■□□□ 1.03
HDAC4-212ENST00000495497 CATSPER4Q7RTX7 472 aa21.51■■□□□ 1.03
HDAC4-212ENST00000495497 MYOCDQ8IZQ8 938 aa21.51■■□□□ 1.03
HDAC4-212ENST00000495497 DHX58Q96C10 678 aa21.51■■□□□ 1.03
HDAC4-212ENST00000495497 ADAM2Q99965 735 aa21.51■■□□□ 1.03
HDAC4-212ENST00000495497 KIFC3Q9BVG8 833 aa21.51■■□□□ 1.03
HDAC4-212ENST00000495497 INO80BQ9C086 356 aaPredicted RBP21.51■■□□□ 1.03
HDAC4-212ENST00000495497 FAM13BQ9NYF5 915 aa21.51■■□□□ 1.03
HDAC4-212ENST00000495497 A0A1B0GVL5 298 aa21.5■■□□□ 1.03
HDAC4-212ENST00000495497 INO80B-WBP1J3KQ70 363 aa21.5■■□□□ 1.03
HDAC4-212ENST00000495497 POLR2DO15514 142 aaKnown RBP21.5■■□□□ 1.03
HDAC4-212ENST00000495497 UPP2O95045 317 aa21.5■■□□□ 1.03
HDAC4-212ENST00000495497 AMHP03971 560 aa21.5■■□□□ 1.03
HDAC4-212ENST00000495497 SFPQP23246 707 aaKnown RBP eCLIP21.5■■□□□ 1.03
HDAC4-212ENST00000495497 PBX2P40425 430 aa21.5■■□□□ 1.03
HDAC4-212ENST00000495497 POU5F1BQ06416 359 aa21.5■■□□□ 1.03
HDAC4-212ENST00000495497 DSC3Q14574 896 aa21.5■■□□□ 1.03
HDAC4-212ENST00000495497 SV2BQ7L1I2 683 aa21.5■■□□□ 1.03
HDAC4-212ENST00000495497 STAMQ92783 540 aa21.5■■□□□ 1.03
HDAC4-212ENST00000495497 LRCH3Q96II8 777 aa21.5■■□□□ 1.03
HDAC4-212ENST00000495497 IFT74Q96LB3 600 aa21.5■■□□□ 1.03
HDAC4-212ENST00000495497 SLC9A7Q96T83 725 aa21.5■■□□□ 1.03
HDAC4-212ENST00000495497 REEP2Q9BRK0 252 aa21.5■■□□□ 1.03
HDAC4-212ENST00000495497 FTHL17Q9BXU8 183 aa21.5■■□□□ 1.03
HDAC4-212ENST00000495497 TSPYL2Q9H2G4 693 aaPredicted RBP21.5■■□□□ 1.03
HDAC4-212ENST00000495497 DENND3A2RUS2 1198 aa21.49■■□□□ 1.03
HDAC4-212ENST00000495497 KRT18P05783 430 aaKnown RBP21.49■■□□□ 1.03
HDAC4-212ENST00000495497 CMA1P23946 247 aa21.49■■□□□ 1.03
HDAC4-212ENST00000495497 NAMPTP43490 491 aa21.49■■□□□ 1.03
HDAC4-212ENST00000495497 PEX3P56589 373 aa21.49■■□□□ 1.03
HDAC4-212ENST00000495497 MBTD1Q05BQ5 628 aa21.49■■□□□ 1.03
HDAC4-212ENST00000495497 GIT2Q14161 759 aa21.49■■□□□ 1.03
HDAC4-212ENST00000495497 DYMQ7RTS9 669 aa21.49■■□□□ 1.03
HDAC4-212ENST00000495497 IFNLR1Q8IU57 520 aaPredicted RBP21.49■■□□□ 1.03
HDAC4-212ENST00000495497 HERC6Q8IVU3 1022 aa21.49■■□□□ 1.03
HDAC4-212ENST00000495497 DRC1Q96MC2 740 aa21.49■■□□□ 1.03
HDAC4-212ENST00000495497 TIPINQ9BVW5 301 aa21.49■■□□□ 1.03
HDAC4-212ENST00000495497 KCND2Q9NZV8 630 aa21.49■■□□□ 1.03
HDAC4-212ENST00000495497 TRIOBPQ9H2D6 2365 aa21.49■■□□□ 1.03
HDAC4-212ENST00000495497 LAMA3Q16787 3333 aa21.49■■□□□ 1.03
HDAC4-212ENST00000495497 ADGRA3Q8IWK6 1321 aa21.49■■□□□ 1.03
HDAC4-212ENST00000495497 MYMKA6NI61 221 aa21.48■■□□□ 1.03
HDAC4-212ENST00000495497 CCDC169A6NNP5 214 aa21.48■■□□□ 1.03
HDAC4-212ENST00000495497 MYOGP15173 224 aa21.48■■□□□ 1.03
HDAC4-212ENST00000495497 PFKFB1P16118 471 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms