RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 ADAM2Q99965 735 aa19.04■□□□□ 0.64
SNX17-209ENST00000494893 GCOM2Q9BZD3 368 aaPredicted RBP19.04■□□□□ 0.64
SNX17-209ENST00000494893 POLR3FQ9H1D9 316 aaPredicted RBP19.04■□□□□ 0.64
SNX17-209ENST00000494893 CDH23Q9H251 3354 aa19.04■□□□□ 0.64
SNX17-209ENST00000494893 RC3H2Q9HBD1 1191 aaKnown RBP19.04■□□□□ 0.64
SNX17-209ENST00000494893 POLD4Q9HCU8 107 aa19.04■□□□□ 0.64
SNX17-209ENST00000494893 MORC2Q9Y6X9 1032 aaPredicted RBP19.04■□□□□ 0.64
SNX17-209ENST00000494893 ARHGEF35A5YM69 484 aa19.03■□□□□ 0.64
SNX17-209ENST00000494893 C9IYK1 514 aa19.03■□□□□ 0.64
SNX17-209ENST00000494893 EYA4O95677 639 aa19.03■□□□□ 0.64
SNX17-209ENST00000494893 SRGAP2CP0DJJ0 459 aa19.03■□□□□ 0.64
SNX17-209ENST00000494893 CYP11B2P19099 503 aa19.03■□□□□ 0.64
SNX17-209ENST00000494893 SLC39A14Q15043 492 aa19.03■□□□□ 0.64
SNX17-209ENST00000494893 CABP7Q86V35 215 aa19.03■□□□□ 0.64
SNX17-209ENST00000494893 SP7Q8TDD2 431 aaPredicted RBP19.03■□□□□ 0.64
SNX17-209ENST00000494893 BSNDQ8WZ55 320 aa19.03■□□□□ 0.64
SNX17-209ENST00000494893 AK8Q96MA6 479 aa19.03■□□□□ 0.64
SNX17-209ENST00000494893 CCDC43Q96MW1 224 aaKnown RBP19.03■□□□□ 0.64
SNX17-209ENST00000494893 CLIC6Q96NY7 704 aa19.03■□□□□ 0.64
SNX17-209ENST00000494893 PLIN2Q99541 437 aa19.03■□□□□ 0.64
SNX17-209ENST00000494893 ZBED2Q9BTP6 218 aa19.03■□□□□ 0.64
SNX17-209ENST00000494893 CSRNP2Q9H175 543 aa19.03■□□□□ 0.64
SNX17-209ENST00000494893 RGS18Q9NS28 235 aa19.03■□□□□ 0.64
SNX17-209ENST00000494893 TFIP11Q9UBB9 837 aaKnown RBP19.03■□□□□ 0.64
SNX17-209ENST00000494893 SRPRBQ9Y5M8 271 aaKnown RBP19.03■□□□□ 0.64
SNX17-209ENST00000494893 LONP1P36776 959 aaKnown RBP19.02■□□□□ 0.64
SNX17-209ENST00000494893 FAM189BP81408 668 aa19.02■□□□□ 0.64
SNX17-209ENST00000494893 ZRSR1Q15695 479 aaKnown RBP19.02■□□□□ 0.64
SNX17-209ENST00000494893 SPECC1Q5M775 1068 aa19.02■□□□□ 0.64
SNX17-209ENST00000494893 PPP2R2DQ66LE6 453 aa19.02■□□□□ 0.64
SNX17-209ENST00000494893 RNF149Q8NC42 400 aa19.02■□□□□ 0.64
SNX17-209ENST00000494893 RUSC1Q9BVN2 902 aa19.02■□□□□ 0.64
SNX17-209ENST00000494893 SLC28A3Q9HAS3 691 aa19.02■□□□□ 0.64
SNX17-209ENST00000494893 LINC01553A4QN01 128 aa19.01■□□□□ 0.63
SNX17-209ENST00000494893 ASAP2O43150 1006 aa19.01■□□□□ 0.63
SNX17-209ENST00000494893 SLC34A2O95436 690 aa19.01■□□□□ 0.63
SNX17-209ENST00000494893 PTENP60484 403 aa19.01■□□□□ 0.63
SNX17-209ENST00000494893 FOXD4L6Q3SYB3 417 aaPredicted RBP19.01■□□□□ 0.63
SNX17-209ENST00000494893 ODR4Q5SWX8 454 aa19.01■□□□□ 0.63
SNX17-209ENST00000494893 FOXD4L3Q6VB84 417 aaPredicted RBP19.01■□□□□ 0.63
SNX17-209ENST00000494893 IFNLR1Q8IU57 520 aaPredicted RBP19.01■□□□□ 0.63
SNX17-209ENST00000494893 LINC00301Q8NCQ3 95 aa19.01■□□□□ 0.63
SNX17-209ENST00000494893 MCPH1Q8NEM0 835 aa19.01■□□□□ 0.63
SNX17-209ENST00000494893 ZNF689Q96CS4 500 aaPredicted RBP19.01■□□□□ 0.63
SNX17-209ENST00000494893 EPSTI1Q96J88 318 aa19.01■□□□□ 0.63
SNX17-209ENST00000494893 BLOC1S4Q9NUP1 217 aa19.01■□□□□ 0.63
SNX17-209ENST00000494893 DNM3Q9UQ16 869 aa19.01■□□□□ 0.63
SNX17-209ENST00000494893 MYH15Q9Y2K3 1946 aa19.01■□□□□ 0.63
SNX17-209ENST00000494893 TTC3P53804 2025 aa19.01■□□□□ 0.63
SNX17-209ENST00000494893 DENND3A2RUS2 1198 aa19■□□□□ 0.63
SNX17-209ENST00000494893 EPOPA6NHQ4 379 aa19■□□□□ 0.63
SNX17-209ENST00000494893 LINC00271P0C7V0 271 aa19■□□□□ 0.63
SNX17-209ENST00000494893 SARSP49591 514 aaKnown RBP19■□□□□ 0.63
SNX17-209ENST00000494893 GATMP50440 423 aa19■□□□□ 0.63
SNX17-209ENST00000494893 MXD4Q14582 209 aaPredicted RBP19■□□□□ 0.63
SNX17-209ENST00000494893 KARSQ15046 597 aaKnown RBP19■□□□□ 0.63
SNX17-209ENST00000494893 FAM102BQ5T8I3 360 aa19■□□□□ 0.63
SNX17-209ENST00000494893 CLEC17AQ6ZS10 378 aa19■□□□□ 0.63
SNX17-209ENST00000494893 C1orf186Q6ZWK4 172 aa19■□□□□ 0.63
SNX17-209ENST00000494893 SRGAP1Q7Z6B7 1085 aa19■□□□□ 0.63
SNX17-209ENST00000494893 NPAS4Q8IUM7 802 aa19■□□□□ 0.63
SNX17-209ENST00000494893 DAW1Q8N136 415 aa19■□□□□ 0.63
SNX17-209ENST00000494893 CHAMP1Q96JM3 812 aa19■□□□□ 0.63
SNX17-209ENST00000494893 CDX2Q99626 313 aaPredicted RBP19■□□□□ 0.63
SNX17-209ENST00000494893 INSL6Q9Y581 213 aa19■□□□□ 0.63
SNX17-209ENST00000494893 SLC26A4O43511 780 aa18.99■□□□□ 0.63
SNX17-209ENST00000494893 DGKIO75912 1065 aa18.99■□□□□ 0.63
SNX17-209ENST00000494893 SFPQP23246 707 aaKnown RBP eCLIP18.99■□□□□ 0.63
SNX17-209ENST00000494893 HOXA11P31270 313 aaPredicted RBP18.99■□□□□ 0.63
SNX17-209ENST00000494893 UBA7P41226 1012 aa18.99■□□□□ 0.63
SNX17-209ENST00000494893 MBTD1Q05BQ5 628 aa18.99■□□□□ 0.63
SNX17-209ENST00000494893 POU5F1BQ06416 359 aa18.99■□□□□ 0.63
SNX17-209ENST00000494893 MAPK7Q13164 816 aa18.99■□□□□ 0.63
SNX17-209ENST00000494893 AMHR2Q16671 573 aa18.99■□□□□ 0.63
SNX17-209ENST00000494893 RINT1Q6NUQ1 792 aa18.99■□□□□ 0.63
SNX17-209ENST00000494893 FAM43BQ6ZT52 329 aaPredicted RBP18.99■□□□□ 0.63
SNX17-209ENST00000494893 SLC24A5Q71RS6 500 aa18.99■□□□□ 0.63
SNX17-209ENST00000494893 CATSPER4Q7RTX7 472 aa18.99■□□□□ 0.63
SNX17-209ENST00000494893 MYLIPQ8WY64 445 aa18.99■□□□□ 0.63
SNX17-209ENST00000494893 INO80BQ9C086 356 aaPredicted RBP18.99■□□□□ 0.63
SNX17-209ENST00000494893 CCSER1Q9C0I3 900 aa18.99■□□□□ 0.63
SNX17-209ENST00000494893 NT5C3AQ9H0P0 336 aa18.99■□□□□ 0.63
SNX17-209ENST00000494893 PRDM12Q9H4Q4 367 aa18.99■□□□□ 0.63
SNX17-209ENST00000494893 CERS4Q9HA82 394 aa18.99■□□□□ 0.63
SNX17-209ENST00000494893 C1orf112Q9NSG2 853 aa18.99■□□□□ 0.63
SNX17-209ENST00000494893 RNF19AQ9NV58 838 aa18.99■□□□□ 0.63
SNX17-209ENST00000494893 ATP6V1DQ9Y5K8 247 aa18.99■□□□□ 0.63
SNX17-209ENST00000494893 ATF7P17544 494 aaPredicted RBP18.98■□□□□ 0.63
SNX17-209ENST00000494893 PLCG1P19174 1290 aa18.98■□□□□ 0.63
SNX17-209ENST00000494893 IBSPP21815 317 aaPredicted RBP18.98■□□□□ 0.63
SNX17-209ENST00000494893 PHKA2P46019 1235 aa18.98■□□□□ 0.63
SNX17-209ENST00000494893 SLC12A3P55017 1021 aa18.98■□□□□ 0.63
SNX17-209ENST00000494893 SYT2Q8N9I0 419 aaPredicted RBP18.98■□□□□ 0.63
SNX17-209ENST00000494893 SYMPKQ92797 1274 aaKnown RBP18.98■□□□□ 0.63
SNX17-209ENST00000494893 ZNF396Q96N95 335 aaPredicted RBP18.98■□□□□ 0.63
SNX17-209ENST00000494893 YME1L1Q96TA2 773 aa18.98■□□□□ 0.63
SNX17-209ENST00000494893 NFKBIZQ9BYH8 718 aa18.98■□□□□ 0.63
SNX17-209ENST00000494893 AGPAT5Q9NUQ2 364 aa18.98■□□□□ 0.63
SNX17-209ENST00000494893 ADGRA3Q8IWK6 1321 aa18.98■□□□□ 0.63
SNX17-209ENST00000494893 RFXAPO00287 272 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms