RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 MYCLP12524 364 aaPredicted RBP17.1■□□□□ 0.33
SHISA5-216ENST00000494854 NMT1P30419 496 aaKnown RBP17.1■□□□□ 0.33
SHISA5-216ENST00000494854 MNX1P50219 401 aaPredicted RBP17.1■□□□□ 0.33
SHISA5-216ENST00000494854 ARHGEF16Q5VV41 709 aa17.1■□□□□ 0.33
SHISA5-216ENST00000494854 ZNF662Q6ZS27 426 aa17.1■□□□□ 0.33
SHISA5-216ENST00000494854 RRAGAQ7L523 313 aa17.1■□□□□ 0.33
SHISA5-216ENST00000494854 CACNA2D4Q7Z3S7 1137 aa17.1■□□□□ 0.33
SHISA5-216ENST00000494854 PAWRQ96IZ0 340 aaKnown RBP17.1■□□□□ 0.33
SHISA5-216ENST00000494854 ZSWIM4Q9H7M6 989 aa17.1■□□□□ 0.33
SHISA5-216ENST00000494854 TBC1D22BQ9NU19 505 aa17.1■□□□□ 0.33
SHISA5-216ENST00000494854 CGNQ9P2M7 1197 aaKnown RBP17.1■□□□□ 0.33
SHISA5-216ENST00000494854 NR3C1P04150 777 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 PGK2P07205 417 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 GUCY2CP25092 1073 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 RPL13P26373 211 aaKnown RBP17.09■□□□□ 0.33
SHISA5-216ENST00000494854 KCNA1Q09470 495 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 KCNH2Q12809 1159 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 ERCC6LQ2NKX8 1250 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 MSL3Q8N5Y2 521 aaKnown RBP17.09■□□□□ 0.33
SHISA5-216ENST00000494854 TRPV1Q8NER1 839 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 CCDC42Q96M95 316 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 FIZ1Q96SL8 496 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 CEP72Q9P209 647 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 ARMCX3Q9UH62 379 aaPredicted RBP17.09■□□□□ 0.33
SHISA5-216ENST00000494854 DDX20Q9UHI6 824 aaKnown RBP17.09■□□□□ 0.33
SHISA5-216ENST00000494854 SAMM50Q9Y512 469 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 CTAGE9A4FU28 777 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 BAATQ14032 418 aaPredicted RBP17.09■□□□□ 0.33
SHISA5-216ENST00000494854 PDXDC1Q6P996 788 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 KIAA1328Q86T90 577 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 FAM178BQ8IXR5 827 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 PURBQ96QR8 312 aaKnown RBP17.09■□□□□ 0.33
SHISA5-216ENST00000494854 TINF2Q9BSI4 451 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 LSM14BQ9BX40 385 aaKnown RBP17.09■□□□□ 0.33
SHISA5-216ENST00000494854 ARHGAP20Q9P2F6 1191 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 TRIM10Q9UDY6 481 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 GUCA1BQ9UMX6 200 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 UBE4BO95155 1302 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 ZMYM2Q9UBW7 1377 aa17.09■□□□□ 0.33
SHISA5-216ENST00000494854 FRMPD3Q5JV73 1810 aa17.08■□□□□ 0.33
SHISA5-216ENST00000494854 EFCAB8A8MWE9 144 aa17.08■□□□□ 0.33
SHISA5-216ENST00000494854 SLC16A3O15427 465 aaKnown RBP17.08■□□□□ 0.33
SHISA5-216ENST00000494854 TGFB1I1O43294 461 aa17.08■□□□□ 0.33
SHISA5-216ENST00000494854 TADA3O75528 432 aa17.08■□□□□ 0.33
SHISA5-216ENST00000494854 NOL4O94818 638 aa17.08■□□□□ 0.33
SHISA5-216ENST00000494854 PLEKP08567 350 aaPredicted RBP17.08■□□□□ 0.33
SHISA5-216ENST00000494854 PPP2R3AQ06190 1150 aa17.08■□□□□ 0.33
SHISA5-216ENST00000494854 CCDC122Q5T0U0 273 aa17.08■□□□□ 0.33
SHISA5-216ENST00000494854 ZNF720Q7Z2F6 126 aa17.08■□□□□ 0.33
SHISA5-216ENST00000494854 ZNF467Q7Z7K2 595 aaPredicted RBP17.08■□□□□ 0.33
SHISA5-216ENST00000494854 CLIC2O15247 247 aa17.08■□□□□ 0.32
SHISA5-216ENST00000494854 AKAP3O75969 853 aa17.08■□□□□ 0.32
SHISA5-216ENST00000494854 QARSP47897 775 aaKnown RBP17.08■□□□□ 0.32
SHISA5-216ENST00000494854 ZC2HC1CQ53FD0 456 aaPredicted RBP17.08■□□□□ 0.32
SHISA5-216ENST00000494854 ODR4Q5SWX8 454 aa17.08■□□□□ 0.32
SHISA5-216ENST00000494854 XRRA1Q6P2D8 792 aa17.08■□□□□ 0.32
SHISA5-216ENST00000494854 PADI6Q6TGC4 694 aa17.08■□□□□ 0.32
SHISA5-216ENST00000494854 STXBP4Q6ZWJ1 553 aa17.08■□□□□ 0.32
SHISA5-216ENST00000494854 UBXN4Q92575 508 aa17.08■□□□□ 0.32
SHISA5-216ENST00000494854 DPF3Q92784 378 aa17.08■□□□□ 0.32
SHISA5-216ENST00000494854 JAKMIP2Q96AA8 810 aa17.08■□□□□ 0.32
SHISA5-216ENST00000494854 NAPGQ99747 312 aaPredicted RBP17.08■□□□□ 0.32
SHISA5-216ENST00000494854 CRACR2AQ9BSW2 395 aa17.08■□□□□ 0.32
SHISA5-216ENST00000494854 NUCKS1Q9H1E3 243 aaKnown RBP17.08■□□□□ 0.32
SHISA5-216ENST00000494854 METTL14Q9HCE5 456 aaKnown RBP17.08■□□□□ 0.32
SHISA5-216ENST00000494854 DBR1Q9UK59 544 aaKnown RBP17.08■□□□□ 0.32
SHISA5-216ENST00000494854 SEPT4O43236 478 aa17.07■□□□□ 0.32
SHISA5-216ENST00000494854 KRT86O43790 486 aa17.07■□□□□ 0.32
SHISA5-216ENST00000494854 ATP9AO75110 1047 aa17.07■□□□□ 0.32
SHISA5-216ENST00000494854 HIP1RO75146 1068 aa17.07■□□□□ 0.32
SHISA5-216ENST00000494854 AFPP02771 609 aaKnown RBP17.07■□□□□ 0.32
SHISA5-216ENST00000494854 EPB41P11171 864 aaKnown RBP17.07■□□□□ 0.32
SHISA5-216ENST00000494854 CNGA1P29973 690 aa17.07■□□□□ 0.32
SHISA5-216ENST00000494854 CCND2P30279 289 aa17.07■□□□□ 0.32
SHISA5-216ENST00000494854 TUBB2AQ13885 445 aa17.07■□□□□ 0.32
SHISA5-216ENST00000494854 NFIL3Q16649 462 aa17.07■□□□□ 0.32
SHISA5-216ENST00000494854 MAMDC4Q6UXC1 1216 aa17.07■□□□□ 0.32
SHISA5-216ENST00000494854 DIS3LQ8TF46 1054 aaKnown RBP17.07■□□□□ 0.32
SHISA5-216ENST00000494854 TUBB2BQ9BVA1 445 aa17.07■□□□□ 0.32
SHISA5-216ENST00000494854 ACAD9Q9H845 621 aa17.07■□□□□ 0.32
SHISA5-216ENST00000494854 NLRC4Q9NPP4 1024 aa17.07■□□□□ 0.32
SHISA5-216ENST00000494854 TFR2Q9UP52 801 aa17.07■□□□□ 0.32
SHISA5-216ENST00000494854 DOCK5Q9H7D0 1870 aa17.07■□□□□ 0.32
SHISA5-216ENST00000494854 LYPLA2O95372 231 aa17.06■□□□□ 0.32
SHISA5-216ENST00000494854 COL6A1P12109 1028 aa17.06■□□□□ 0.32
SHISA5-216ENST00000494854 EIF4A3P38919 411 aaKnown RBP17.06■□□□□ 0.32
SHISA5-216ENST00000494854 CASP4P49662 377 aa17.06■□□□□ 0.32
SHISA5-216ENST00000494854 MAPK7Q13164 816 aa17.06■□□□□ 0.32
SHISA5-216ENST00000494854 SPA17Q15506 151 aa17.06■□□□□ 0.32
SHISA5-216ENST00000494854 ANKRD35Q8N283 1001 aa17.06■□□□□ 0.32
SHISA5-216ENST00000494854 DEF6Q9H4E7 631 aa17.06■□□□□ 0.32
SHISA5-216ENST00000494854 C11orf49Q9H6J7 331 aa17.06■□□□□ 0.32
SHISA5-216ENST00000494854 CDC23Q9UJX2 597 aa17.06■□□□□ 0.32
SHISA5-216ENST00000494854 LCTP09848 1927 aa17.06■□□□□ 0.32
SHISA5-216ENST00000494854 SYNGAP1Q96PV0 1343 aa17.06■□□□□ 0.32
SHISA5-216ENST00000494854 RCCD1A6NED2 376 aa17.06■□□□□ 0.32
SHISA5-216ENST00000494854 ZNF263O14978 683 aa17.06■□□□□ 0.32
SHISA5-216ENST00000494854 LCA5LO95447 670 aa17.06■□□□□ 0.32
SHISA5-216ENST00000494854 NR3C2P08235 984 aa17.06■□□□□ 0.32
SHISA5-216ENST00000494854 RARRES1P49788 294 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms