RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 LAMTOR4Q0VGL1 99 aa19.64■□□□□ 0.73
HDAC4-211ENST00000494800 GPM6BQ13491 265 aa19.64■□□□□ 0.73
HDAC4-211ENST00000494800 PAN2Q504Q3 1202 aaKnown RBP19.64■□□□□ 0.73
HDAC4-211ENST00000494800 DTHD1Q6ZMT9 781 aa19.64■□□□□ 0.73
HDAC4-211ENST00000494800 SRGAP1Q7Z6B7 1085 aa19.64■□□□□ 0.73
HDAC4-211ENST00000494800 FERMT3Q86UX7 667 aa19.64■□□□□ 0.73
HDAC4-211ENST00000494800 KSR1Q8IVT5 923 aa19.64■□□□□ 0.73
HDAC4-211ENST00000494800 ABI1Q8IZP0 508 aa19.64■□□□□ 0.73
HDAC4-211ENST00000494800 C4orf32Q8N8J7 132 aa19.64■□□□□ 0.73
HDAC4-211ENST00000494800 PLVAPQ9BX97 442 aa19.64■□□□□ 0.73
HDAC4-211ENST00000494800 DBR1Q9UK59 544 aaKnown RBP19.64■□□□□ 0.73
HDAC4-211ENST00000494800 TTC3P53804 2025 aa19.63■□□□□ 0.73
HDAC4-211ENST00000494800 C5orf67F2Z3F1 127 aa19.63■□□□□ 0.73
HDAC4-211ENST00000494800 MED24O75448 989 aa19.63■□□□□ 0.73
HDAC4-211ENST00000494800 CSDE1O75534 798 aaKnown RBP19.63■□□□□ 0.73
HDAC4-211ENST00000494800 SPATA31C1P0DKV0 1188 aa19.63■□□□□ 0.73
HDAC4-211ENST00000494800 FGFR4P22455 802 aa19.63■□□□□ 0.73
HDAC4-211ENST00000494800 CCT6AP40227 531 aaKnown RBP19.63■□□□□ 0.73
HDAC4-211ENST00000494800 PCBP1Q15365 356 aaKnown RBP eCLIP19.63■□□□□ 0.73
HDAC4-211ENST00000494800 RNF149Q8NC42 400 aa19.63■□□□□ 0.73
HDAC4-211ENST00000494800 MCPH1Q8NEM0 835 aa19.63■□□□□ 0.73
HDAC4-211ENST00000494800 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.63■□□□□ 0.73
HDAC4-211ENST00000494800 AAASQ9NRG9 546 aa19.63■□□□□ 0.73
HDAC4-211ENST00000494800 THEGQ9P2T0 379 aa19.63■□□□□ 0.73
HDAC4-211ENST00000494800 PIN4Q9Y237 131 aaKnown RBP19.63■□□□□ 0.73
HDAC4-211ENST00000494800 LOXHD1Q8IVV2 1947 aa19.63■□□□□ 0.73
HDAC4-211ENST00000494800 A0A0U1RQF3 1178 aa19.62■□□□□ 0.73
HDAC4-211ENST00000494800 TBKBP1A7MCY6 615 aa19.62■□□□□ 0.73
HDAC4-211ENST00000494800 USO1O60763 962 aaKnown RBP19.62■□□□□ 0.73
HDAC4-211ENST00000494800 NCBP1Q09161 790 aaKnown RBP19.62■□□□□ 0.73
HDAC4-211ENST00000494800 NAALADL2Q58DX5 795 aa19.62■□□□□ 0.73
HDAC4-211ENST00000494800 SPOUT1Q5T280 376 aaKnown RBP19.62■□□□□ 0.73
HDAC4-211ENST00000494800 KRT79Q5XKE5 535 aa19.62■□□□□ 0.73
HDAC4-211ENST00000494800 TWF2Q6IBS0 349 aaKnown RBP19.62■□□□□ 0.73
HDAC4-211ENST00000494800 BRAPQ7Z569 592 aa19.62■□□□□ 0.73
HDAC4-211ENST00000494800 RNF169Q8NCN4 708 aa19.62■□□□□ 0.73
HDAC4-211ENST00000494800 MRPL38Q96DV4 380 aaKnown RBP19.62■□□□□ 0.73
HDAC4-211ENST00000494800 IFT122Q9HBG6 1241 aa19.62■□□□□ 0.73
HDAC4-211ENST00000494800 MRPL42Q9Y6G3 142 aaKnown RBP19.62■□□□□ 0.73
HDAC4-211ENST00000494800 VPS37CA5D8V6 355 aaPredicted RBP19.61■□□□□ 0.73
HDAC4-211ENST00000494800 ARHGEF35A5YM69 484 aa19.61■□□□□ 0.73
HDAC4-211ENST00000494800 ERLIN2O94905 339 aa19.61■□□□□ 0.73
HDAC4-211ENST00000494800 EOMESO95936 686 aa19.61■□□□□ 0.73
HDAC4-211ENST00000494800 RAB27AP51159 221 aa19.61■□□□□ 0.73
HDAC4-211ENST00000494800 TIGD5Q53EQ6 642 aa19.61■□□□□ 0.73
HDAC4-211ENST00000494800 POTEGQ6S5H5 508 aa19.61■□□□□ 0.73
HDAC4-211ENST00000494800 ECHDC2Q86YB7 292 aa19.61■□□□□ 0.73
HDAC4-211ENST00000494800 IGSF22Q8N9C0 903 aa19.61■□□□□ 0.73
HDAC4-211ENST00000494800 SNX29Q8TEQ0 813 aa19.61■□□□□ 0.73
HDAC4-211ENST00000494800 RSPH1Q8WYR4 309 aa19.61■□□□□ 0.73
HDAC4-211ENST00000494800 INTS4Q96HW7 963 aaKnown RBP19.61■□□□□ 0.73
HDAC4-211ENST00000494800 LMAN2LQ9H0V9 348 aa19.61■□□□□ 0.73
HDAC4-211ENST00000494800 XPNPEP1Q9NQW7 623 aa19.61■□□□□ 0.73
HDAC4-211ENST00000494800 EYSQ5T1H1 3165 aa19.6■□□□□ 0.73
HDAC4-211ENST00000494800 COL4A4P53420 1690 aaPredicted RBP19.6■□□□□ 0.73
HDAC4-211ENST00000494800 K7ELQ4 463 aaPredicted RBP19.6■□□□□ 0.73
HDAC4-211ENST00000494800 POU5F1BQ06416 359 aa19.6■□□□□ 0.73
HDAC4-211ENST00000494800 FAM102BQ5T8I3 360 aa19.6■□□□□ 0.73
HDAC4-211ENST00000494800 ATXN2LQ8WWM7 1075 aaKnown RBP19.6■□□□□ 0.73
HDAC4-211ENST00000494800 P2RX5Q93086 422 aa19.6■□□□□ 0.73
HDAC4-211ENST00000494800 TRAIPQ9BWF2 469 aa19.6■□□□□ 0.73
HDAC4-211ENST00000494800 TMEM117Q9H0C3 514 aa19.6■□□□□ 0.73
HDAC4-211ENST00000494800 AGPAT5Q9NUQ2 364 aa19.6■□□□□ 0.73
HDAC4-211ENST00000494800 PCDHB12Q9Y5F1 795 aa19.6■□□□□ 0.73
HDAC4-211ENST00000494800 BMP15O95972 392 aa19.59■□□□□ 0.73
HDAC4-211ENST00000494800 FGFR1P11362 822 aa19.59■□□□□ 0.73
HDAC4-211ENST00000494800 ARL2P36404 184 aa19.59■□□□□ 0.73
HDAC4-211ENST00000494800 GATMP50440 423 aa19.59■□□□□ 0.73
HDAC4-211ENST00000494800 ATP2C1P98194 919 aaPredicted RBP19.59■□□□□ 0.73
HDAC4-211ENST00000494800 CSPP1Q1MSJ5 1256 aa19.59■□□□□ 0.73
HDAC4-211ENST00000494800 AAK1Q2M2I8 961 aa19.59■□□□□ 0.73
HDAC4-211ENST00000494800 POLR3FQ9H1D9 316 aaPredicted RBP19.59■□□□□ 0.73
HDAC4-211ENST00000494800 COG5Q9UP83 839 aa19.59■□□□□ 0.73
HDAC4-211ENST00000494800 KIAA1024Q9UPX6 916 aa19.59■□□□□ 0.73
HDAC4-211ENST00000494800 RALGAPA2Q2PPJ7 1873 aa19.58■□□□□ 0.73
HDAC4-211ENST00000494800 TRANK1O15050 2925 aa19.58■□□□□ 0.73
HDAC4-211ENST00000494800 A0A087WWV3 80 aa19.58■□□□□ 0.72
HDAC4-211ENST00000494800 INO80B-WBP1J3KQ70 363 aa19.58■□□□□ 0.72
HDAC4-211ENST00000494800 LINC00271P0C7V0 271 aa19.58■□□□□ 0.72
HDAC4-211ENST00000494800 PTENP60484 403 aa19.58■□□□□ 0.72
HDAC4-211ENST00000494800 MRPS5P82675 430 aaKnown RBP19.58■□□□□ 0.72
HDAC4-211ENST00000494800 ARL6IP4Q66PJ3 421 aaKnown RBP19.58■□□□□ 0.72
HDAC4-211ENST00000494800 PADI6Q6TGC4 694 aa19.58■□□□□ 0.72
HDAC4-211ENST00000494800 LRRC43Q8N309 656 aa19.58■□□□□ 0.72
HDAC4-211ENST00000494800 PGBD4Q96DM1 585 aa19.58■□□□□ 0.72
HDAC4-211ENST00000494800 MRPL9Q9BYD2 267 aaKnown RBP19.58■□□□□ 0.72
HDAC4-211ENST00000494800 NFKBIZQ9BYH8 718 aa19.58■□□□□ 0.72
HDAC4-211ENST00000494800 DDX19AQ9NUU7 478 aaKnown RBP19.58■□□□□ 0.72
HDAC4-211ENST00000494800 DNM3Q9UQ16 869 aa19.58■□□□□ 0.72
HDAC4-211ENST00000494800 LAG3P18627 525 aa19.57■□□□□ 0.72
HDAC4-211ENST00000494800 AXLP30530 894 aa19.57■□□□□ 0.72
HDAC4-211ENST00000494800 CAPSQ13938 189 aa19.57■□□□□ 0.72
HDAC4-211ENST00000494800 MAEAQ7L5Y9 396 aa19.57■□□□□ 0.72
HDAC4-211ENST00000494800 HSCBQ8IWL3 235 aa19.57■□□□□ 0.72
HDAC4-211ENST00000494800 ASAP3Q8TDY4 903 aa19.57■□□□□ 0.72
HDAC4-211ENST00000494800 SYMPKQ92797 1274 aaKnown RBP19.57■□□□□ 0.72
HDAC4-211ENST00000494800 HLA-CQ95604 372 aa19.57■□□□□ 0.72
HDAC4-211ENST00000494800 FAM105AQ9NUU6 356 aa19.57■□□□□ 0.72
HDAC4-211ENST00000494800 ARID2Q68CP9 1835 aa19.57■□□□□ 0.72
HDAC4-211ENST00000494800 MYO9BQ13459 2157 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms