RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 UNQ6494/PRO21346Q6UXR6 183 aa3.7□□□□□ -1.82
LRIF1-203ENST00000494675 PLEKHH3Q7Z736 793 aa3.7□□□□□ -1.82
LRIF1-203ENST00000494675 ZBTB46Q86UZ6 589 aa3.7□□□□□ -1.82
LRIF1-203ENST00000494675 CBARPQ8N350 705 aaPredicted RBP3.7□□□□□ -1.82
LRIF1-203ENST00000494675 MTG2Q9H4K7 406 aa3.7□□□□□ -1.82
LRIF1-203ENST00000494675 MKS1Q9NXB0 559 aa3.7□□□□□ -1.82
LRIF1-203ENST00000494675 PPP2R3BQ9Y5P8 575 aa3.7□□□□□ -1.82
LRIF1-203ENST00000494675 MRFAP1Q9Y605 127 aa3.7□□□□□ -1.82
LRIF1-203ENST00000494675 TNKSO95271 1327 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 PRSS38A1L453 326 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 C1QTNF3-AMACRE9PGA6 284 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 PCDH8O95206 1070 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 ZNF20P17024 532 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 GPR3P46089 330 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 EPHB1P54762 984 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 MANFP55145 182 aaKnown RBP3.69□□□□□ -1.82
LRIF1-203ENST00000494675 CD83Q01151 205 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 MAP3K12Q12852 859 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 UGT8Q16880 541 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 INAVAQ3KP66 663 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 TBC1D10BQ4KMP7 808 aaPredicted RBP3.69□□□□□ -1.82
LRIF1-203ENST00000494675 MCTP2Q6DN12 878 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 TRMT10BQ6PF06 316 aaKnown RBP3.69□□□□□ -1.82
LRIF1-203ENST00000494675 CXXC5Q7LFL8 322 aaKnown RBP3.69□□□□□ -1.82
LRIF1-203ENST00000494675 OTOP2Q7RTS6 562 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 KANSL1Q7Z3B3 1105 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 PNMA8AQ86V59 439 aaPredicted RBP3.69□□□□□ -1.82
LRIF1-203ENST00000494675 TXNDC5Q8NBS9 432 aaKnown RBP3.69□□□□□ -1.82
LRIF1-203ENST00000494675 DVL3Q92997 716 aaPredicted RBP3.69□□□□□ -1.82
LRIF1-203ENST00000494675 CHMP4CQ96CF2 233 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 EAF2Q96CJ1 260 aaPredicted RBP3.69□□□□□ -1.82
LRIF1-203ENST00000494675 FUBP3Q96I24 572 aaKnown RBP eCLIP3.69□□□□□ -1.822e-6■■■■■ 26.8
LRIF1-203ENST00000494675 FAXDC2Q96IV6 333 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 LCORQ96JN0 433 aaPredicted RBP3.69□□□□□ -1.82
LRIF1-203ENST00000494675 C8orf49Q96NF6 230 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 WNT8AQ9H1J5 351 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 AASDHPPTQ9NRN7 309 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 KCND1Q9NSA2 647 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 DNAJC28Q9NX36 388 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 TCEAL9Q9UHQ7 104 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 EDARQ9UNE0 448 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 INVSQ9Y283 1065 aa3.69□□□□□ -1.82
LRIF1-203ENST00000494675 MYPNQ86TC9 1320 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 H0Y858 1186 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 MATN3O15232 486 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 H2AFYO75367 372 aaKnown RBP3.68□□□□□ -1.82
LRIF1-203ENST00000494675 CHGBP05060 677 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 IL13P35225 146 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 ADCY8P40145 1251 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 MLLT6P55198 1093 aaPredicted RBP3.68□□□□□ -1.82
LRIF1-203ENST00000494675 NFATC3Q12968 1075 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 MOGSQ13724 837 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 STILQ15468 1287 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 ZBTB41Q5SVQ8 909 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 KANK2Q63ZY3 851 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 C1orf162Q8NEQ5 155 aaPredicted RBP3.68□□□□□ -1.82
LRIF1-203ENST00000494675 L2HGDHQ9H9P8 463 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 CCM2LQ9NUG4 571 aaPredicted RBP3.68□□□□□ -1.82
LRIF1-203ENST00000494675 KCMF1Q9P0J7 381 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 THRAP3Q9Y2W1 955 aaKnown RBP3.68□□□□□ -1.82
LRIF1-203ENST00000494675 NUMBLQ9Y6R0 609 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 XPOTO43592 962 aaKnown RBP3.68□□□□□ -1.82
LRIF1-203ENST00000494675 SNUPNO95149 360 aaKnown RBP3.68□□□□□ -1.82
LRIF1-203ENST00000494675 KNG1P01042 644 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 CYP1A1P04798 512 aaPredicted RBP3.68□□□□□ -1.82
LRIF1-203ENST00000494675 LPLP06858 475 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 MTHFD2P13995 350 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 ACAP2Q15057 778 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.68□□□□□ -1.82
LRIF1-203ENST00000494675 PITRM1Q5JRX3 1037 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 GRAMD4Q6IC98 578 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 USP51Q70EK9 711 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 RAX2Q96IS3 184 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 NOL10Q9BSC4 688 aaKnown RBP3.68□□□□□ -1.82
LRIF1-203ENST00000494675 QRSL1Q9H0R6 528 aaKnown RBP3.68□□□□□ -1.82
LRIF1-203ENST00000494675 FTSJ1Q9UET6 329 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 FBXO10Q9UK96 956 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 SYNPO2Q9UMS6 1093 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 USP18Q9UMW8 372 aa3.68□□□□□ -1.82
LRIF1-203ENST00000494675 KLHL33A6NCF5 533 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 C9orf118A6NHY6 69 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 TRIM75PA6NK02 468 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 OPHN1O60890 802 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 RBP3P10745 1247 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 ZNF28P17035 718 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 GDF5P43026 501 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 RAB27AP51159 221 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 LGALS4P56470 323 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 SRSF2Q01130 221 aaKnown RBP3.67□□□□□ -1.82
LRIF1-203ENST00000494675 MCL1Q07820 350 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 PCBP2Q15366 365 aaKnown RBP eCLIP3.67□□□□□ -1.82
LRIF1-203ENST00000494675 DGKDQ16760 1214 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 TOR2AQ5JU69 321 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 OR14C36Q8NHC7 312 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 GAB3Q8WWW8 586 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 RSAD2Q8WXG1 361 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 ZCCHC14Q8WYQ9 949 aaKnown RBP3.67□□□□□ -1.82
LRIF1-203ENST00000494675 HOOK2Q96ED9 719 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 HIST1H2AHQ96KK5 128 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 ORAI2Q96SN7 254 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms