RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 A0A087X1B8 175 aa6.07□□□□□ -1.44
SMC4-224ENST00000494612 ZEB2O60315 1214 aa6.07□□□□□ -1.44
SMC4-224ENST00000494612 C4BPAP04003 597 aaKnown RBP6.07□□□□□ -1.44
SMC4-224ENST00000494612 INHBCP55103 352 aa6.07□□□□□ -1.44
SMC4-224ENST00000494612 PTH1RQ03431 593 aa6.07□□□□□ -1.44
SMC4-224ENST00000494612 TBR1Q16650 682 aa6.07□□□□□ -1.44
SMC4-224ENST00000494612 BRDTQ58F21 947 aaPredicted RBP6.07□□□□□ -1.44
SMC4-224ENST00000494612 ZMAT1Q5H9K5 638 aa6.07□□□□□ -1.44
SMC4-224ENST00000494612 RNF219Q5W0B1 726 aaPredicted RBP6.07□□□□□ -1.44
SMC4-224ENST00000494612 POLNQ7Z5Q5 900 aa6.07□□□□□ -1.44
SMC4-224ENST00000494612 CFHR4Q92496 578 aa6.07□□□□□ -1.44
SMC4-224ENST00000494612 MTMR8Q96EF0 704 aa6.07□□□□□ -1.44
SMC4-224ENST00000494612 SCYL1Q96KG9 808 aa6.07□□□□□ -1.44
SMC4-224ENST00000494612 SMAD5Q99717 465 aaKnown RBP6.07□□□□□ -1.44
SMC4-224ENST00000494612 KCNH7Q9NS40 1196 aa6.07□□□□□ -1.44
SMC4-224ENST00000494612 B3GALT1Q9Y5Z6 326 aa6.07□□□□□ -1.44
SMC4-224ENST00000494612 PHLDB1Q86UU1 1377 aa6.06□□□□□ -1.44
SMC4-224ENST00000494612 MMEP08473 750 aa6.06□□□□□ -1.44
SMC4-224ENST00000494612 DGCR2P98153 550 aa6.06□□□□□ -1.44
SMC4-224ENST00000494612 OCRLQ01968 901 aa6.06□□□□□ -1.44
SMC4-224ENST00000494612 STILQ15468 1287 aa6.06□□□□□ -1.44
SMC4-224ENST00000494612 DDB1Q16531 1140 aa6.06□□□□□ -1.44
SMC4-224ENST00000494612 LSM12Q3MHD2 195 aaKnown RBP6.06□□□□□ -1.44
SMC4-224ENST00000494612 ZNF568Q3ZCX4 644 aa6.06□□□□□ -1.44
SMC4-224ENST00000494612 BROXQ5VW32 411 aa6.06□□□□□ -1.44
SMC4-224ENST00000494612 CXXC5Q7LFL8 322 aaKnown RBP6.06□□□□□ -1.44
SMC4-224ENST00000494612 SPATS2Q86XZ4 545 aaKnown RBP6.06□□□□□ -1.44
SMC4-224ENST00000494612 PASD1Q8IV76 773 aa6.06□□□□□ -1.44
SMC4-224ENST00000494612 RTF1Q92541 710 aaKnown RBP6.06□□□□□ -1.44
SMC4-224ENST00000494612 DLG3Q92796 817 aa6.06□□□□□ -1.44
SMC4-224ENST00000494612 CRAMP1Q96RY5 1269 aa6.06□□□□□ -1.44
SMC4-224ENST00000494612 APOBEC2Q9Y235 224 aaKnown RBP6.06□□□□□ -1.44
SMC4-224ENST00000494612 PRAMEF22A3QJZ6 481 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 RASSF10A6NK89 507 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 FOXP2O15409 715 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 CDC14BO60729 498 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 PRKD3O94806 890 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 PDGFRBP09619 1106 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 IL13RA1P78552 427 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 MTMR1Q13613 665 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 EIF4HQ15056 248 aaKnown RBP6.05□□□□□ -1.44
SMC4-224ENST00000494612 CATSPEREQ5SY80 951 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 LARP4Q71RC2 724 aaKnown RBP eCLIP6.05□□□□□ -1.44
SMC4-224ENST00000494612 CMIPQ8IY22 773 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 EFHBQ8N7U6 833 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 CNTD1Q8N815 330 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 IL17DQ8TAD2 202 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 SLC5A5Q92911 643 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 ZG16BQ96DA0 208 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 GBP4Q96PP9 640 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 PLA2G12BQ9BX93 195 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 GALNT8Q9NY28 637 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 BTBD7Q9P203 1132 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 G3BP2Q9UN86 482 aaKnown RBP6.05□□□□□ -1.44
SMC4-224ENST00000494612 NR2E1Q9Y466 385 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 SPO11Q9Y5K1 396 aa6.05□□□□□ -1.44
SMC4-224ENST00000494612 ALG1L2C9J202 215 aa6.04□□□□□ -1.44
SMC4-224ENST00000494612 ARHGAP6O43182 974 aa6.04□□□□□ -1.44
SMC4-224ENST00000494612 HMGB1P09429 215 aaKnown RBP6.04□□□□□ -1.44
SMC4-224ENST00000494612 PTGS1P23219 599 aa6.04□□□□□ -1.44
SMC4-224ENST00000494612 RRADP55042 308 aa6.04□□□□□ -1.44
SMC4-224ENST00000494612 PLEKHG6Q3KR16 790 aa6.04□□□□□ -1.44
SMC4-224ENST00000494612 WDR72Q3MJ13 1102 aa6.04□□□□□ -1.44
SMC4-224ENST00000494612 TRIM68Q6AZZ1 485 aa6.04□□□□□ -1.44
SMC4-224ENST00000494612 C1orf210Q8IVY1 113 aa6.04□□□□□ -1.44
SMC4-224ENST00000494612 CLRN3Q8NCR9 226 aa6.04□□□□□ -1.44
SMC4-224ENST00000494612 HIPK4Q8NE63 616 aa6.04□□□□□ -1.44
SMC4-224ENST00000494612 NEU4Q8WWR8 484 aaPredicted RBP6.04□□□□□ -1.44
SMC4-224ENST00000494612 FAM89AQ96GI7 184 aa6.04□□□□□ -1.44
SMC4-224ENST00000494612 MSL2Q9HCI7 577 aa6.04□□□□□ -1.44
SMC4-224ENST00000494612 INCENPQ9NQS7 918 aa6.04□□□□□ -1.44
SMC4-224ENST00000494612 ACSS2Q9NR19 701 aa6.04□□□□□ -1.44
SMC4-224ENST00000494612 UCKL1Q9NWZ5 548 aa6.04□□□□□ -1.44
SMC4-224ENST00000494612 ARHGAP28Q9P2N2 729 aa6.04□□□□□ -1.44
SMC4-224ENST00000494612 NOC2LQ9Y3T9 749 aaKnown RBP6.04□□□□□ -1.44
SMC4-224ENST00000494612 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.03□□□□□ -1.44
SMC4-224ENST00000494612 APOL3O95236 402 aa6.03□□□□□ -1.44
SMC4-224ENST00000494612 C1SP09871 688 aa6.03□□□□□ -1.44
SMC4-224ENST00000494612 AOAHP28039 575 aa6.03□□□□□ -1.44
SMC4-224ENST00000494612 MC4RP32245 332 aa6.03□□□□□ -1.44
SMC4-224ENST00000494612 GJA4P35212 333 aa6.03□□□□□ -1.44
SMC4-224ENST00000494612 RPS19P39019 145 aaKnown RBP6.03□□□□□ -1.44
SMC4-224ENST00000494612 SCAND1P57086 179 aa6.03□□□□□ -1.44
SMC4-224ENST00000494612 FOXL1Q12952 345 aa6.03□□□□□ -1.44
SMC4-224ENST00000494612 HNRNPA0Q13151 305 aaKnown RBP6.03□□□□□ -1.44
SMC4-224ENST00000494612 ESRP1Q6NXG1 681 aaKnown RBP6.03□□□□□ -1.44
SMC4-224ENST00000494612 CC2D1AQ6P1N0 951 aaPredicted RBP6.03□□□□□ -1.44
SMC4-224ENST00000494612 CACTINQ8WUQ7 758 aaKnown RBP6.03□□□□□ -1.44
SMC4-224ENST00000494612 ASB15Q8WXK1 588 aa6.03□□□□□ -1.44
SMC4-224ENST00000494612 OR14A2Q96R54 314 aa6.03□□□□□ -1.44
SMC4-224ENST00000494612 TOPORSQ9NS56 1045 aaPredicted RBP6.03□□□□□ -1.44
SMC4-224ENST00000494612 FBXO10Q9UK96 956 aa6.03□□□□□ -1.44
SMC4-224ENST00000494612 TRHDEQ9UKU6 1024 aa6.03□□□□□ -1.44
SMC4-224ENST00000494612 ULK1O75385 1050 aa6.02□□□□□ -1.45
SMC4-224ENST00000494612 MPIG6BO95866 241 aa6.02□□□□□ -1.45
SMC4-224ENST00000494612 LMO1P25800 156 aa6.02□□□□□ -1.45
SMC4-224ENST00000494612 ACRV1P26436 265 aa6.02□□□□□ -1.45
SMC4-224ENST00000494612 LSP1P33241 339 aa6.02□□□□□ -1.45
SMC4-224ENST00000494612 KCNQ1P51787 676 aa6.02□□□□□ -1.45
SMC4-224ENST00000494612 SMAD3P84022 425 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms