RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 TRIM29Q14134 588 aa13.24□□□□□ -0.29
CSNK1E-212ENST00000494610 PKN1Q16512 942 aa13.24□□□□□ -0.29
CSNK1E-212ENST00000494610 RARS2Q5T160 578 aaKnown RBP13.24□□□□□ -0.29
CSNK1E-212ENST00000494610 PLA2G4DQ86XP0 818 aa13.24□□□□□ -0.29
CSNK1E-212ENST00000494610 CKAP2LQ8IYA6 745 aa13.24□□□□□ -0.29
CSNK1E-212ENST00000494610 HELQQ8TDG4 1101 aa13.24□□□□□ -0.29
CSNK1E-212ENST00000494610 CDCA3Q99618 268 aaPredicted RBP13.24□□□□□ -0.29
CSNK1E-212ENST00000494610 PRRX2Q99811 253 aa13.24□□□□□ -0.29
CSNK1E-212ENST00000494610 ORC3Q9UBD5 711 aaPredicted RBP13.24□□□□□ -0.29
CSNK1E-212ENST00000494610 MYH9P35579 1960 aaKnown RBP13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 WDR81Q562E7 1941 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 IGLV3-22A0A075B6J6 115 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 C2orf71A6NGG8 1288 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 hCG_1984214I3L0E3 225 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 GALR2O43603 387 aaPredicted RBP13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 RPLP2P05387 115 aaKnown RBP13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 EPCAMP16422 314 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 CDC27P30260 824 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 SREBF1P36956 1147 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 CLK2P49760 499 aaKnown RBP13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 ADCY7P51828 1080 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 NLRP11P59045 1033 aaKnown RBP13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 ZNF484Q5JVG2 852 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 FAM160B1Q5W0V3 765 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 FRMD5Q7Z6J6 570 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 ECHDC2Q86YB7 292 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 ZNF713Q8N859 430 aaPredicted RBP13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 BCL7CQ8WUZ0 217 aaPredicted RBP13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 GJA10Q969M2 543 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 ZNF558Q96NG5 402 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 SLC26A6Q9BXS9 759 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 TMEM117Q9H0C3 514 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 ADAMTS10Q9H324 1103 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 LIMD1Q9UGP4 676 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 ATP6V1DQ9Y5K8 247 aa13.23□□□□□ -0.29
CSNK1E-212ENST00000494610 H3BQV1 296 aa13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 PRPF3O43395 683 aaKnown RBP13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 PI15O43692 258 aa13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 ADD1P35611 737 aaKnown RBP13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 DDIT3P35638 169 aa13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 DRP2Q13474 957 aa13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 NTRK3Q16288 839 aa13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 LARP1BQ659C4 914 aaKnown RBP13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 EFCAB12Q6NXP0 572 aa13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 MIS18BP1Q6P0N0 1132 aa13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 SLC39A11Q8N1S5 342 aa13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 MRPL43Q8N983 215 aaKnown RBP13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 RASGRP4Q8TDF6 673 aa13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 CCDC12Q8WUD4 166 aaPredicted RBP13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 TNPO1Q92973 898 aaKnown RBP13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 LPPQ93052 612 aa13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 SH2D3AQ9BRG2 576 aa13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 ADAM7Q9H2U9 754 aa13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 FAM217BQ9NTX9 383 aaPredicted RBP13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 SPG21Q9NZD8 308 aa13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 GABBR1Q9UBS5 961 aa13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 PUF60Q9UHX1 559 aaKnown RBP13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 AKT3Q9Y243 479 aa13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 LZTS1Q9Y250 596 aa13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 MAFBQ9Y5Q3 323 aaPredicted RBP13.22□□□□□ -0.29
CSNK1E-212ENST00000494610 COL1A2P08123 1366 aa13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 TMEM150BA6NC51 233 aa13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 PRR23AA6NEV1 266 aa13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 MEIS3P2A8K0S8 358 aa13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 IPO5O00410 1097 aaKnown RBP13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 STX6O43752 255 aa13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 JAK2O60674 1132 aa13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 CTDNEP1O95476 244 aa13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 CXCL14O95715 111 aa13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 SLC26A2P50443 739 aa13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 MTMR3Q13615 1198 aa13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 UGCGQ16739 394 aa13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 PDE12Q6L8Q7 609 aaKnown RBP13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 LINC01465Q8N7H1 131 aa13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 CCDC148Q8NFR7 591 aa13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 CRYGNQ8WXF5 182 aa13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 C8orf76Q96K31 380 aa13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 ZNF577Q9BSK1 485 aa13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 ELAC1Q9H777 363 aaKnown RBP13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 BRMS1Q9HCU9 246 aa13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 NGRNQ9NPE2 291 aaKnown RBP13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 SORCS3Q9UPU3 1222 aa13.21□□□□□ -0.29
CSNK1E-212ENST00000494610 EP300Q09472 2414 aaPredicted RBP13.21□□□□□ -0.3
CSNK1E-212ENST00000494610 EDIL3O43854 480 aa13.2□□□□□ -0.3
CSNK1E-212ENST00000494610 ZNF862O60290 1169 aa13.2□□□□□ -0.3
CSNK1E-212ENST00000494610 B4GALT3O60512 393 aa13.2□□□□□ -0.3
CSNK1E-212ENST00000494610 MYBP10242 640 aa13.2□□□□□ -0.3
CSNK1E-212ENST00000494610 BCAR1P56945 870 aa13.2□□□□□ -0.3
CSNK1E-212ENST00000494610 KRT17Q04695 432 aa13.2□□□□□ -0.3
CSNK1E-212ENST00000494610 SMC1AQ14683 1233 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-212ENST00000494610 TMC5Q6UXY8 1006 aa13.2□□□□□ -0.3
CSNK1E-212ENST00000494610 ZNF598Q86UK7 904 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-212ENST00000494610 ABI1Q8IZP0 508 aa13.2□□□□□ -0.3
CSNK1E-212ENST00000494610 LRRC43Q8N309 656 aa13.2□□□□□ -0.3
CSNK1E-212ENST00000494610 BBXQ8WY36 941 aaPredicted RBP13.2□□□□□ -0.3
CSNK1E-212ENST00000494610 CASP10Q92851 521 aa13.2□□□□□ -0.3
CSNK1E-212ENST00000494610 VN1R3Q9BXE9 311 aa13.2□□□□□ -0.3
CSNK1E-212ENST00000494610 BARHL2Q9NY43 387 aa13.2□□□□□ -0.3
CSNK1E-212ENST00000494610 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.19□□□□□ -0.3
CSNK1E-212ENST00000494610 VPS37CA5D8V6 355 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms