RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 ZNF287Q9HBT7 754 aa7.69□□□□□ -1.18
SNX13-210ENST00000494402 PDRG1Q9NUG6 133 aa7.69□□□□□ -1.18
SNX13-210ENST00000494402 MTRRQ9UBK8 725 aa7.69□□□□□ -1.18
SNX13-210ENST00000494402 GDF2Q9UK05 429 aaPredicted RBP7.69□□□□□ -1.18
SNX13-210ENST00000494402 VPS28Q9UK41 221 aa7.69□□□□□ -1.18
SNX13-210ENST00000494402 OGDHLQ9ULD0 1010 aa7.69□□□□□ -1.18
SNX13-210ENST00000494402 DYRK1BQ9Y463 629 aa7.69□□□□□ -1.18
SNX13-210ENST00000494402 A0A088AWK7 358 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 CCDC196A0A1B0GTZ2 297 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 FAM47E-STBD1D6RA91 191 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 IPO5O00410 1097 aaKnown RBP7.68□□□□□ -1.18
SNX13-210ENST00000494402 NPC1O15118 1278 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 DOK2O60496 412 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 MSCO60682 206 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 URI1O94763 535 aaPredicted RBP7.68□□□□□ -1.18
SNX13-210ENST00000494402 HSPA4LO95757 839 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 THBDP07204 575 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 SLFN14P0C7P3 912 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 MC4RP32245 332 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 VAMP2P63027 116 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 ERVK-24P63145 666 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 LACTBP83111 547 aaPredicted RBP7.68□□□□□ -1.18
SNX13-210ENST00000494402 SCARB2Q14108 478 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 PTPN14Q15678 1187 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 DPY19L1Q2PZI1 675 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 PAN2Q504Q3 1202 aaKnown RBP7.68□□□□□ -1.18
SNX13-210ENST00000494402 PPM1JQ5JR12 505 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 CATSPER4Q7RTX7 472 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 KCNK18Q7Z418 384 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 ANKRD13BQ86YJ7 626 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 TCP11L2Q8N4U5 519 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 NPLOC4Q8TAT6 608 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 MGARPQ8TDB4 240 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 IPPKQ9H8X2 491 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 SP110Q9HB58 689 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 KRT84Q9NSB2 600 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 HAUS2Q9NVX0 235 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 GPATCH2Q9NW75 528 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 PRR13Q9NZ81 148 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 KIF17Q9P2E2 1029 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 TBC1D29Q9UFV1 150 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 ST14Q9Y5Y6 855 aa7.68□□□□□ -1.18
SNX13-210ENST00000494402 SOS1Q07889 1333 aaPredicted RBP7.68□□□□□ -1.18
SNX13-210ENST00000494402 A0A1W2PPC4 97 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 PI4KAP2A4QPH2 592 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 RTN3O95197 1032 aaPredicted RBP7.67□□□□□ -1.18
SNX13-210ENST00000494402 BMP2P12643 396 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 HNRNPLP14866 589 aaKnown RBP eCLIP7.67□□□□□ -1.18
SNX13-210ENST00000494402 EPHA1P21709 976 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 TNNT3P45378 269 aaPredicted RBP7.67□□□□□ -1.18
SNX13-210ENST00000494402 SMCPP49901 116 aaPredicted RBP7.67□□□□□ -1.18
SNX13-210ENST00000494402 ARF3P61204 181 aaPredicted RBP7.67□□□□□ -1.18
SNX13-210ENST00000494402 ARF1P84077 181 aaKnown RBP7.67□□□□□ -1.18
SNX13-210ENST00000494402 IRF9Q00978 393 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 KCNAB2Q13303 367 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 EFR3AQ14156 821 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 SCARF1Q14162 830 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 PKN2Q16513 984 aaKnown RBP7.67□□□□□ -1.18
SNX13-210ENST00000494402 UGT8Q16880 541 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 CCDC157Q569K6 752 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 HP1BP3Q5SSJ5 553 aaPredicted RBP7.67□□□□□ -1.18
SNX13-210ENST00000494402 ZMYM1Q5SVZ6 1142 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 CC2D1BQ5T0F9 858 aaKnown RBP7.67□□□□□ -1.18
SNX13-210ENST00000494402 UBXN11Q5T124 520 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 MBNL2Q5VZF2 373 aaKnown RBP7.67□□□□□ -1.18
SNX13-210ENST00000494402 E4F1Q66K89 784 aaPredicted RBP7.67□□□□□ -1.18
SNX13-210ENST00000494402 MRPL14Q6P1L8 145 aaKnown RBP7.67□□□□□ -1.18
SNX13-210ENST00000494402 WAPLQ7Z5K2 1190 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 MILR1Q7Z6M3 343 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 MOGAT3Q86VF5 341 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 COL23A1Q86Y22 540 aaPredicted RBP7.67□□□□□ -1.18
SNX13-210ENST00000494402 CPOQ8IVL8 374 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 SIRT2Q8IXJ6 389 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 CARNMT1Q8N4J0 409 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 OR10H5Q8NGA6 315 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 SPPL3Q8TCT6 385 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 RIN2Q8WYP3 895 aaPredicted RBP7.67□□□□□ -1.18
SNX13-210ENST00000494402 COPS5Q92905 334 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 WDR89Q96FK6 387 aaPredicted RBP7.67□□□□□ -1.18
SNX13-210ENST00000494402 PTPN18Q99952 460 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 NCAPGQ9BPX3 1015 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 ARHGAP39Q9C0H5 1083 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 NRSN2Q9GZP1 204 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 ZMAT4Q9H898 229 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 PRDM5Q9NQX1 630 aaPredicted RBP7.67□□□□□ -1.18
SNX13-210ENST00000494402 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.67□□□□□ -1.18
SNX13-210ENST00000494402 CATSPERZQ9NTU4 200 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 DNAJB12Q9NXW2 375 aaKnown RBP7.67□□□□□ -1.18
SNX13-210ENST00000494402 SLC39A10Q9ULF5 831 aa7.67□□□□□ -1.18
SNX13-210ENST00000494402 LCHNA4D1U4 455 aa7.66□□□□□ -1.18
SNX13-210ENST00000494402 TRIM38O00635 465 aa7.66□□□□□ -1.18
SNX13-210ENST00000494402 AXIN1O15169 862 aa7.66□□□□□ -1.18
SNX13-210ENST00000494402 PHGDHO43175 533 aaKnown RBP7.66□□□□□ -1.18
SNX13-210ENST00000494402 FSBPO95073 299 aa7.66□□□□□ -1.18
SNX13-210ENST00000494402 KRT1P04264 644 aa7.66□□□□□ -1.18
SNX13-210ENST00000494402 ACTN2P35609 894 aa7.66□□□□□ -1.18
SNX13-210ENST00000494402 CASP6P55212 293 aa7.66□□□□□ -1.18
SNX13-210ENST00000494402 RAB1AP62820 205 aa7.66□□□□□ -1.18
SNX13-210ENST00000494402 MRPS9P82933 396 aaKnown RBP7.66□□□□□ -1.18
SNX13-210ENST00000494402 CREMQ03060 361 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms