RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 MCM6Q14566 821 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 PPP2R5AQ15172 486 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 TCTN1Q2MV58 587 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 C1orf186Q6ZWK4 172 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 SRGAP1Q7Z6B7 1085 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 GPBP1Q86WP2 473 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 PDILTQ8N807 584 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 IFT74Q96LB3 600 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 DRC1Q96MC2 740 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 FTHL17Q9BXU8 183 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 PANK2Q9BZ23 570 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 ERVK-5Q9HDB9 667 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 BLOC1S4Q9NUP1 217 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 MICAL3Q7RTP6 2002 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 LRRIQ4A6NIV6 560 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 HIP1RO75146 1068 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 AMHP03971 560 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 ATP2A2P16615 1042 aaKnown RBP13.82□□□□□ -0.2
TRA2A-209ENST00000494255 GLRA2P23416 452 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 GUCY2CP25092 1073 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 WDR5P61964 334 aaKnown RBP13.82□□□□□ -0.2
TRA2A-209ENST00000494255 POU5F1BQ06416 359 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 CAPSQ13938 189 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 HABP4Q5JVS0 413 aaKnown RBP13.82□□□□□ -0.2
TRA2A-209ENST00000494255 SHC4Q6S5L8 630 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 FAM228AQ86W67 206 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 IPO9Q96P70 1041 aaKnown RBP13.82□□□□□ -0.2
TRA2A-209ENST00000494255 SLC9A7Q96T83 725 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 ST3GAL5Q9UNP4 418 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.81□□□□□ -0.2
TRA2A-209ENST00000494255 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.81□□□□□ -0.2
TRA2A-209ENST00000494255 DENND3A2RUS2 1198 aa13.81□□□□□ -0.2
TRA2A-209ENST00000494255 CSDE1O75534 798 aaKnown RBP13.81□□□□□ -0.2
TRA2A-209ENST00000494255 KRT18P05783 430 aaKnown RBP13.81□□□□□ -0.2
TRA2A-209ENST00000494255 LRIT3Q3SXY7 679 aa13.81□□□□□ -0.2
TRA2A-209ENST00000494255 RESP18Q5W5W9 173 aa13.81□□□□□ -0.2
TRA2A-209ENST00000494255 ADALQ6DHV7 355 aa13.81□□□□□ -0.2
TRA2A-209ENST00000494255 SV2BQ7L1I2 683 aa13.81□□□□□ -0.2
TRA2A-209ENST00000494255 CATSPER4Q7RTX7 472 aa13.81□□□□□ -0.2
TRA2A-209ENST00000494255 ZBTB8OSQ8IWT0 167 aa13.81□□□□□ -0.2
TRA2A-209ENST00000494255 PHOSPHO2Q8TCD6 241 aa13.81□□□□□ -0.2
TRA2A-209ENST00000494255 PYM1Q9BRP8 204 aaKnown RBP13.81□□□□□ -0.2
TRA2A-209ENST00000494255 IFT122Q9HBG6 1241 aa13.81□□□□□ -0.2
TRA2A-209ENST00000494255 ZSCAN20P17040 1043 aaPredicted RBP13.8□□□□□ -0.2
TRA2A-209ENST00000494255 FGFR4P22455 802 aa13.8□□□□□ -0.2
TRA2A-209ENST00000494255 NAMPTP43490 491 aa13.8□□□□□ -0.2
TRA2A-209ENST00000494255 PTENP60484 403 aa13.8□□□□□ -0.2
TRA2A-209ENST00000494255 RAD51AP2Q09MP3 1159 aa13.8□□□□□ -0.2
TRA2A-209ENST00000494255 DMP1Q13316 513 aaPredicted RBP13.8□□□□□ -0.2
TRA2A-209ENST00000494255 MYOCDQ8IZQ8 938 aa13.8□□□□□ -0.2
TRA2A-209ENST00000494255 IQUBQ8NA54 791 aa13.8□□□□□ -0.2
TRA2A-209ENST00000494255 DEPTORQ8TB45 409 aa13.8□□□□□ -0.2
TRA2A-209ENST00000494255 LRRC15Q8TF66 581 aa13.8□□□□□ -0.2
TRA2A-209ENST00000494255 NFKBIZQ9BYH8 718 aa13.8□□□□□ -0.2
TRA2A-209ENST00000494255 GDPD2Q9HCC8 539 aa13.8□□□□□ -0.2
TRA2A-209ENST00000494255 MYH11P35749 1972 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 A0A087X0B3 334 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 INO80B-WBP1J3KQ70 363 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 ERLIN2O94905 339 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 DEFB103AP81534 67 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 NCBP1Q09161 790 aaKnown RBP13.79□□□□□ -0.2
TRA2A-209ENST00000494255 PCBP1Q15365 356 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRA2A-209ENST00000494255 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.79□□□□□ -0.22e-7■■■■■ 30.1
TRA2A-209ENST00000494255 IFNLR1Q8IU57 520 aaPredicted RBP13.79□□□□□ -0.2
TRA2A-209ENST00000494255 BSNDQ8WZ55 320 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 DHX58Q96C10 678 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 C2orf40Q9H1Z8 148 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 TSPYL2Q9H2G4 693 aaPredicted RBP13.79□□□□□ -0.2
TRA2A-209ENST00000494255 TMX1Q9H3N1 280 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 CUEDC2Q9H467 287 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 C17orf75Q9HAS0 396 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 POLD4Q9HCU8 107 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 KCNG1Q9UIX4 513 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 ODF2LQ9ULJ1 636 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.79□□□□□ -0.2
TRA2A-209ENST00000494255 GOLGA6L4A6NEF3 574 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 CCDC169A6NNP5 214 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 RBAK-RBAKDNI3L0D1 243 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 ENPP3O14638 875 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 TBCAO75347 108 aaKnown RBP13.79□□□□□ -0.2
TRA2A-209ENST00000494255 FAM13AO94988 1023 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 CMA1P23946 247 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 SMAD3P84022 425 aaKnown RBP13.79□□□□□ -0.2
TRA2A-209ENST00000494255 CSPP1Q1MSJ5 1256 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 TPRNQ4KMQ1 711 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 NAALADL2Q58DX5 795 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 ARSHQ5FYA8 562 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 ADAM2Q99965 735 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 REEP2Q9BRK0 252 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 ZBED2Q9BTP6 218 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 MINDY3Q9H8M7 445 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 C1orf112Q9NSG2 853 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 RNF216Q9NWF9 866 aaPredicted RBP13.79□□□□□ -0.2
TRA2A-209ENST00000494255 LARSQ9P2J5 1176 aaKnown RBP13.79□□□□□ -0.2
TRA2A-209ENST00000494255 KCNH3Q9ULD8 1083 aa13.79□□□□□ -0.2
TRA2A-209ENST00000494255 NPHP3-ACAD11A0A0J9YXS1 232 aa13.78□□□□□ -0.2
TRA2A-209ENST00000494255 POLR2DO15514 142 aaKnown RBP13.78□□□□□ -0.2
TRA2A-209ENST00000494255 MGEA5O60502 916 aa13.78□□□□□ -0.2
TRA2A-209ENST00000494255 EFNA5P52803 228 aa13.78□□□□□ -0.2
TRA2A-209ENST00000494255 SMTNP53814 917 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms