RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 PCDHB4Q9Y5E5 795 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 ADAMTSL1Q8N6G6 1762 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 PXDNQ92626 1479 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 ZNF236Q9UL36 1845 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 RPS6KA5O75582 802 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 ZBTB7AO95365 584 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 CELA3BP08861 270 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 PTMSP20962 102 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 MAP4K2Q12851 820 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 TAF7LQ5H9L4 462 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 UBXN11Q5T124 520 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 PRRT2Q7Z6L0 340 aaPredicted RBP3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 GGNQ86UU5 652 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 FAM126BQ8IXS8 530 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 KYQ8NBH2 561 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 ZCCHC14Q8WYQ9 949 aaKnown RBP3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 PTPN18Q99952 460 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 AARSD1Q9BTE6 412 aaKnown RBP3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 DTLQ9NZJ0 730 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 ZNF652Q9Y2D9 606 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 COA3Q9Y2R0 106 aaPredicted RBP3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 SLIT2O94813 1529 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 BTAF1O14981 1849 aa3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 COL1A1P02452 1464 aaPredicted RBP3.12□□□□□ -1.91
CDC42EP3-205ENST00000494083 TCRBV5S4A2TA0A5A2 114 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 KCNK3O14649 394 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 KIF20AO95235 890 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 PABPC1P11940 636 aaKnown RBP3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 GSPT1P15170 499 aaKnown RBP3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 SARSP49591 514 aaKnown RBP3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 GJA9P57773 515 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 TESK1Q15569 626 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 CREBRFQ8IUR6 639 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 CXorf38Q8TB03 319 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 DRC1Q96MC2 740 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 CCDC94Q9BW85 323 aaPredicted RBP3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 TRIM55Q9BYV6 548 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 GTPBP4Q9BZE4 634 aaKnown RBP3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 CROTQ9UKG9 612 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 ATRNO75882 1429 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 FAM221BA6H8Z2 402 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 AP5Z1O43299 807 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 DGKIO75912 1065 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 GRK2P25098 689 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 RPL13P26373 211 aaKnown RBP3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 GRK3P35626 688 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 PLP2Q04941 152 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 ZC3H18Q86VM9 953 aaKnown RBP3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 YY1AP1Q9H869 796 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 GPR27Q9NS67 375 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 RRP7BPQ9NSQ0 103 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 COL4A1P02462 1669 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 ZSWIM8A7E2V4 1837 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 AGRPO00253 132 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 B4GALT3O60512 393 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 TADA3O75528 432 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 FAM209AQ5JX71 171 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 IQCEQ6IPM2 695 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 FSTL4Q6MZW2 842 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 MTERF4Q7Z6M4 381 aaKnown RBP3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 TTC14Q96N46 770 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 TANGO6Q9C0B7 1094 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 MSRB2Q9Y3D2 182 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 MAP3K15Q6ZN16 1313 aa3.11□□□□□ -1.91
CDC42EP3-205ENST00000494083 ZC3H6P61129 1189 aaKnown RBP3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 ST3GAL1Q11201 340 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 HHIPL2Q6UWX4 724 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 NSMFQ6X4W1 530 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 LIMS2Q7Z4I7 341 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 PROSER1Q86XN7 944 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 TNPO1Q92973 898 aaKnown RBP3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 EXOC2Q96KP1 924 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 EPB41L1Q9H4G0 881 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 IPPKQ9H8X2 491 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 BCCIPQ9P287 314 aaKnown RBP eCLIP3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 PPP1R1BQ9UD71 204 aaPredicted RBP3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 USP25Q9UHP3 1055 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 JAG2Q9Y219 1238 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 ZKSCAN5Q9Y2L8 839 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 ATXN2Q99700 1313 aaKnown RBP3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 COL16A1Q07092 1604 aaPredicted RBP3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 ZNF28P17035 718 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 CHMLP26374 656 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 GTF2A2P52657 109 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 NKX3-2P78367 333 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 IRX6P78412 446 aaPredicted RBP3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 TBC1D10BQ4KMP7 808 aaPredicted RBP3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 EMC4Q5J8M3 183 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 LBX2Q6XYB7 198 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 GPR155Q7Z3F1 870 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 ZSCAN30Q86W11 494 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 FBXL16Q8N461 479 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 SH3RF2Q8TEC5 729 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 INVSQ9Y283 1065 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 SETD1BQ9UPS6 1966 aaKnown RBP3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 FER1L6Q2WGJ9 1857 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 H7BY64 318 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 C6orf222P0C671 652 aaPredicted RBP3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 RBM6P78332 1123 aaKnown RBP3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 CAP1Q01518 475 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms