RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 SPRED2Q7Z698 418 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 HERC6Q8IVU3 1022 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 MYOCDQ8IZQ8 938 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 ASAP3Q8TDY4 903 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 PRPF31Q8WWY3 499 aaKnown RBP12.98□□□□□ -0.33
UBA3-211ENST00000493957 NLRP7Q8WX94 980 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 SLC7A3Q8WY07 619 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 NLRP4Q96MN2 994 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 FAM161BQ96MY7 647 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 SCLT1Q96NL6 688 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 NACC1Q96RE7 527 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 SLC9A7Q96T83 725 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 FDXACB1Q9BRP7 624 aaPredicted RBP12.98□□□□□ -0.33
UBA3-211ENST00000493957 RAB34Q9BZG1 259 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 NKX2-4Q9H2Z4 354 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 TTYH1Q9H313 450 aaPredicted RBP12.98□□□□□ -0.33
UBA3-211ENST00000493957 ZSCAN16Q9H4T2 348 aaPredicted RBP12.98□□□□□ -0.33
UBA3-211ENST00000493957 ATP6V0A4Q9HBG4 840 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 POLD4Q9HCU8 107 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 FBXO2Q9UK22 296 aaPredicted RBP12.98□□□□□ -0.33
UBA3-211ENST00000493957 DBR1Q9UK59 544 aaKnown RBP12.98□□□□□ -0.33
UBA3-211ENST00000493957 ST3GAL5Q9UNP4 418 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 ENPP3O14638 875 aa12.97□□□□□ -0.33
UBA3-211ENST00000493957 DARSP14868 501 aaKnown RBP12.97□□□□□ -0.33
UBA3-211ENST00000493957 IBSPP21815 317 aaPredicted RBP12.97□□□□□ -0.33
UBA3-211ENST00000493957 LAMTOR4Q0VGL1 99 aa12.97□□□□□ -0.33
UBA3-211ENST00000493957 KRT79Q5XKE5 535 aa12.97□□□□□ -0.33
UBA3-211ENST00000493957 PADI6Q6TGC4 694 aa12.97□□□□□ -0.33
UBA3-211ENST00000493957 CABP7Q86V35 215 aa12.97□□□□□ -0.33
UBA3-211ENST00000493957 APBB2Q92870 758 aa12.97□□□□□ -0.33
UBA3-211ENST00000493957 CCDC43Q96MW1 224 aaKnown RBP12.97□□□□□ -0.33
UBA3-211ENST00000493957 CSRNP2Q9H175 543 aa12.97□□□□□ -0.33
UBA3-211ENST00000493957 BHMT2Q9H2M3 363 aa12.97□□□□□ -0.33
UBA3-211ENST00000493957 MINDY3Q9H8M7 445 aa12.97□□□□□ -0.33
UBA3-211ENST00000493957 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
UBA3-211ENST00000493957 PPME1Q9Y570 386 aa12.97□□□□□ -0.33
UBA3-211ENST00000493957 COL4A3BPQ9Y5P4 624 aa12.97□□□□□ -0.33
UBA3-211ENST00000493957 ARHGEF35A5YM69 484 aa12.96□□□□□ -0.33
UBA3-211ENST00000493957 DGAT1O75907 488 aa12.96□□□□□ -0.33
UBA3-211ENST00000493957 UPP2O95045 317 aa12.96□□□□□ -0.33
UBA3-211ENST00000493957 BMP15O95972 392 aa12.96□□□□□ -0.33
UBA3-211ENST00000493957 SRGAP2CP0DJJ0 459 aa12.96□□□□□ -0.33
UBA3-211ENST00000493957 XRCC6P12956 609 aaKnown RBP eCLIP12.96□□□□□ -0.33
UBA3-211ENST00000493957 GLRA2P23416 452 aa12.96□□□□□ -0.33
UBA3-211ENST00000493957 EIF4BP23588 611 aaKnown RBP12.96□□□□□ -0.33
UBA3-211ENST00000493957 ARL2P36404 184 aa12.96□□□□□ -0.33
UBA3-211ENST00000493957 NASPP49321 788 aaPredicted RBP12.96□□□□□ -0.33
UBA3-211ENST00000493957 DNM2P50570 870 aa12.96□□□□□ -0.33
UBA3-211ENST00000493957 CAPSQ13938 189 aa12.96□□□□□ -0.33
UBA3-211ENST00000493957 TMEM119Q4V9L6 283 aa12.96□□□□□ -0.33
UBA3-211ENST00000493957 HYIQ5T013 277 aa12.96□□□□□ -0.33
UBA3-211ENST00000493957 USP38Q8NB14 1042 aa12.96□□□□□ -0.33
UBA3-211ENST00000493957 PSPC1Q8WXF1 523 aaKnown RBP12.96□□□□□ -0.33
UBA3-211ENST00000493957 BSNDQ8WZ55 320 aa12.96□□□□□ -0.33
UBA3-211ENST00000493957 TIFAQ96CG3 184 aa12.96□□□□□ -0.33
UBA3-211ENST00000493957 EPSTI1Q96J88 318 aa12.96□□□□□ -0.33
UBA3-211ENST00000493957 JPH2Q9BR39 696 aaPredicted RBP12.96□□□□□ -0.33
UBA3-211ENST00000493957 POLR3FQ9H1D9 316 aaPredicted RBP12.96□□□□□ -0.33
UBA3-211ENST00000493957 IFT122Q9HBG6 1241 aa12.96□□□□□ -0.33
UBA3-211ENST00000493957 SQORQ9Y6N5 450 aa12.96□□□□□ -0.33
UBA3-211ENST00000493957 CDH23Q9H251 3354 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 PLXNA4Q9HCM2 1894 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 EFCAB14O75071 495 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 GJB5O95377 273 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 EYA4O95677 639 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 BRD1O95696 1058 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 AMHP03971 560 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 CA3P07451 260 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 MUTP22033 750 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 GATMP50440 423 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 BECN1Q14457 450 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 DSC3Q14574 896 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 SLC39A14Q15043 492 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 KARSQ15046 597 aaKnown RBP12.95□□□□□ -0.34
UBA3-211ENST00000493957 RNF149Q8NC42 400 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 LINC00301Q8NCQ3 95 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 PHOSPHO2Q8TCD6 241 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 TCP11Q8WWU5 503 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 RUSC1Q9BVN2 902 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 GCOM2Q9BZD3 368 aaPredicted RBP12.95□□□□□ -0.34
UBA3-211ENST00000493957 PCDHA11Q9Y5I1 949 aa12.95□□□□□ -0.34
UBA3-211ENST00000493957 SRPRBQ9Y5M8 271 aaKnown RBP12.95□□□□□ -0.34
UBA3-211ENST00000493957 TDRD15B5MCY1 1934 aaKnown RBP12.95□□□□□ -0.34
UBA3-211ENST00000493957 MYO7AQ13402 2215 aa12.94□□□□□ -0.34
UBA3-211ENST00000493957 GPR182O15218 404 aa12.94□□□□□ -0.34
UBA3-211ENST00000493957 TLL1O43897 1013 aa12.94□□□□□ -0.34
UBA3-211ENST00000493957 GAS2O43903 313 aaKnown RBP12.94□□□□□ -0.34
UBA3-211ENST00000493957 CYP11B2P19099 503 aa12.94□□□□□ -0.34
UBA3-211ENST00000493957 PLCG1P19174 1290 aa12.94□□□□□ -0.34
UBA3-211ENST00000493957 LONP1P36776 959 aaKnown RBP12.94□□□□□ -0.34
UBA3-211ENST00000493957 DNM1Q05193 864 aaKnown RBP12.94□□□□□ -0.34
UBA3-211ENST00000493957 STK38Q15208 465 aa12.94□□□□□ -0.34
UBA3-211ENST00000493957 RAB30Q15771 203 aa12.94□□□□□ -0.34
UBA3-211ENST00000493957 FAM102BQ5T8I3 360 aa12.94□□□□□ -0.34
UBA3-211ENST00000493957 ZNF410Q86VK4 478 aa12.94□□□□□ -0.34
UBA3-211ENST00000493957 DEFB123Q8N688 67 aa12.94□□□□□ -0.34
UBA3-211ENST00000493957 SYMPKQ92797 1274 aaKnown RBP12.94□□□□□ -0.34
UBA3-211ENST00000493957 TOP1MTQ969P6 601 aa12.94□□□□□ -0.34
UBA3-211ENST00000493957 AK8Q96MA6 479 aa12.94□□□□□ -0.34
UBA3-211ENST00000493957 ZNF396Q96N95 335 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms