RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 SIP14410 1827 aa19.8■□□□□ 0.76
PDLIM7-208ENST00000493815 CASP1P29466 404 aa19.8■□□□□ 0.76
PDLIM7-208ENST00000493815 CD52P31358 61 aa19.8■□□□□ 0.76
PDLIM7-208ENST00000493815 AFMP43652 599 aa19.8■□□□□ 0.76
PDLIM7-208ENST00000493815 PPIGQ13427 754 aaKnown RBP eCLIP19.8■□□□□ 0.767e-7■■■□□ 17.5
PDLIM7-208ENST00000493815 GIT2Q14161 759 aa19.8■□□□□ 0.76
PDLIM7-208ENST00000493815 TANC1Q9C0D5 1861 aa19.8■□□□□ 0.76
PDLIM7-208ENST00000493815 ZHX3Q9H4I2 956 aa19.8■□□□□ 0.76
PDLIM7-208ENST00000493815 IL23AQ9NPF7 189 aa19.8■□□□□ 0.76
PDLIM7-208ENST00000493815 KBTBD4Q9NVX7 518 aa19.8■□□□□ 0.76
PDLIM7-208ENST00000493815 KCND2Q9NZV8 630 aa19.8■□□□□ 0.76
PDLIM7-208ENST00000493815 LRRIQ4A6NIV6 560 aa19.79■□□□□ 0.76
PDLIM7-208ENST00000493815 ZNF202O95125 648 aa19.79■□□□□ 0.76
PDLIM7-208ENST00000493815 SLFN14P0C7P3 912 aa19.79■□□□□ 0.76
PDLIM7-208ENST00000493815 DARSP14868 501 aaKnown RBP19.79■□□□□ 0.76
PDLIM7-208ENST00000493815 LIG1P18858 919 aa19.79■□□□□ 0.76
PDLIM7-208ENST00000493815 CEP57L1Q8IYX8 460 aa19.79■□□□□ 0.76
PDLIM7-208ENST00000493815 DBF4BQ8NFT6 615 aa19.79■□□□□ 0.76
PDLIM7-208ENST00000493815 KIFAP3Q92845 792 aa19.79■□□□□ 0.76
PDLIM7-208ENST00000493815 CUEDC2Q9H467 287 aa19.79■□□□□ 0.76
PDLIM7-208ENST00000493815 MINDY3Q9H8M7 445 aa19.79■□□□□ 0.76
PDLIM7-208ENST00000493815 TET1Q8NFU7 2136 aa19.79■□□□□ 0.76
PDLIM7-208ENST00000493815 LOXHD1Q8IVV2 1947 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 ASAP2O43150 1006 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 CXCL10P02778 98 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 EIF4BP23588 611 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 RFC2P35250 354 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 PEX3P56589 373 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 NFX1Q12986 1120 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 TSHZ1Q6ZSZ6 1077 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 ZNF365Q70YC5 407 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 OTOP2Q7RTS6 562 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 ZNF410Q86VK4 478 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 DRC1Q96MC2 740 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 GBP4Q96PP9 640 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 GDF15Q99988 308 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 IFIH1Q9BYX4 1025 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 GCOM2Q9BZD3 368 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 BLZF1Q9H2G9 400 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 RPS6KA5O75582 802 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 CDC42EP1Q00587 391 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 SNW1Q13573 536 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 TFDP1Q14186 410 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 PLEKHG4Q58EX7 1191 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 FAM228AQ86W67 206 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 RPUSD2Q8IZ73 545 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 FMR1NBQ8N0W7 255 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 DNAJC19Q96DA6 116 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.78■□□□□ 0.766e-10■■■■□ 20
PDLIM7-208ENST00000493815 UBE2OQ9C0C9 1292 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 TNMDQ9H2S6 317 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 PADI3Q9ULW8 664 aa19.78■□□□□ 0.76
PDLIM7-208ENST00000493815 ADGRA3Q8IWK6 1321 aa19.77■□□□□ 0.76
PDLIM7-208ENST00000493815 CCDC169A6NNP5 214 aa19.77■□□□□ 0.76
PDLIM7-208ENST00000493815 NR1I2O75469 434 aa19.77■□□□□ 0.76
PDLIM7-208ENST00000493815 PARNO95453 639 aaKnown RBP19.77■□□□□ 0.76
PDLIM7-208ENST00000493815 NPTX2P47972 431 aa19.77■□□□□ 0.76
PDLIM7-208ENST00000493815 PTENP60484 403 aa19.77■□□□□ 0.76
PDLIM7-208ENST00000493815 PAK2Q13177 524 aa19.77■□□□□ 0.76
PDLIM7-208ENST00000493815 C9orf50Q5SZB4 431 aa19.77■□□□□ 0.76
PDLIM7-208ENST00000493815 CHRDL2Q6WN34 429 aa19.77■□□□□ 0.76
PDLIM7-208ENST00000493815 ENGASEQ8NFI3 743 aa19.77■□□□□ 0.76
PDLIM7-208ENST00000493815 PAGE5Q96GU1 130 aa19.77■□□□□ 0.76
PDLIM7-208ENST00000493815 IFT74Q96LB3 600 aa19.77■□□□□ 0.76
PDLIM7-208ENST00000493815 PYM1Q9BRP8 204 aaKnown RBP19.77■□□□□ 0.76
PDLIM7-208ENST00000493815 TIPINQ9BVW5 301 aa19.77■□□□□ 0.76
PDLIM7-208ENST00000493815 ST3GAL5Q9UNP4 418 aa19.77■□□□□ 0.76
PDLIM7-208ENST00000493815 TBCAO75347 108 aaKnown RBP19.76■□□□□ 0.75
PDLIM7-208ENST00000493815 FAM13AO94988 1023 aa19.76■□□□□ 0.75
PDLIM7-208ENST00000493815 IDEP14735 1019 aa19.76■□□□□ 0.75
PDLIM7-208ENST00000493815 PHKA2P46019 1235 aa19.76■□□□□ 0.75
PDLIM7-208ENST00000493815 UBE2HP62256 183 aa19.76■□□□□ 0.75
PDLIM7-208ENST00000493815 FAM160A1Q05DH4 1040 aa19.76■□□□□ 0.75
PDLIM7-208ENST00000493815 DMP1Q13316 513 aaPredicted RBP19.76■□□□□ 0.75
PDLIM7-208ENST00000493815 TMEM240Q5SV17 173 aa19.76■□□□□ 0.75
PDLIM7-208ENST00000493815 MYCT1Q8N699 235 aa19.76■□□□□ 0.75
PDLIM7-208ENST00000493815 CNNM3Q8NE01 707 aa19.76■□□□□ 0.75
PDLIM7-208ENST00000493815 DEPTORQ8TB45 409 aa19.76■□□□□ 0.75
PDLIM7-208ENST00000493815 TRIM9Q9C026 710 aa19.76■□□□□ 0.75
PDLIM7-208ENST00000493815 ODF2LQ9ULJ1 636 aa19.76■□□□□ 0.75
PDLIM7-208ENST00000493815 INO80B-WBP1J3KQ70 363 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 SLC16A4O15374 487 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 PLS3P13797 630 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 NAMPTP43490 491 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 CUL4BQ13620 913 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 ODR4Q5SWX8 454 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 KRBA2Q6ZNG9 492 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 ZNF710Q8N1W2 664 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 SEPT8Q92599 483 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 INO80BQ9C086 356 aaPredicted RBP19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 TMX1Q9H3N1 280 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 PARVGQ9HBI0 331 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 ERVK-5Q9HDB9 667 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 USP20Q9Y2K6 914 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 LAMA3Q16787 3333 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 FGBP02675 491 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 PRR29P0C7W0 189 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 ASIC1P78348 528 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 AMPD3Q01432 767 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 MBTD1Q05BQ5 628 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms