RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 SUGP1Q8IWZ8 645 aaKnown RBP19.57■□□□□ 0.72
COL9A1-210ENST00000493682 MRPL43Q8N983 215 aaKnown RBP19.57■□□□□ 0.72
COL9A1-210ENST00000493682 PRSS33Q8NF86 280 aa19.57■□□□□ 0.72
COL9A1-210ENST00000493682 RDM1Q8NG50 284 aa19.57■□□□□ 0.72
COL9A1-210ENST00000493682 CEP89Q96ST8 783 aa19.57■□□□□ 0.72
COL9A1-210ENST00000493682 GCOM2Q9BZD3 368 aaPredicted RBP19.57■□□□□ 0.72
COL9A1-210ENST00000493682 SEPT9Q9UHD8 586 aaPredicted RBP19.57■□□□□ 0.72
COL9A1-210ENST00000493682 TMEM150BA6NC51 233 aa19.56■□□□□ 0.72
COL9A1-210ENST00000493682 C2orf71A6NGG8 1288 aa19.56■□□□□ 0.72
COL9A1-210ENST00000493682 STBD1O95210 358 aa19.56■□□□□ 0.72
COL9A1-210ENST00000493682 SMC1AQ14683 1233 aaKnown RBP19.56■□□□□ 0.72
COL9A1-210ENST00000493682 PTPN21Q16825 1174 aa19.56■□□□□ 0.72
COL9A1-210ENST00000493682 MTERF2Q49AM1 385 aa19.56■□□□□ 0.72
COL9A1-210ENST00000493682 XKR3Q5GH77 459 aa19.56■□□□□ 0.72
COL9A1-210ENST00000493682 B3GNT9Q6UX72 402 aa19.56■□□□□ 0.72
COL9A1-210ENST00000493682 MIER3Q7Z3K6 550 aa19.56■□□□□ 0.72
COL9A1-210ENST00000493682 FBXL6Q8N531 539 aa19.56■□□□□ 0.72
COL9A1-210ENST00000493682 ASIC4Q96FT7 647 aa19.56■□□□□ 0.72
COL9A1-210ENST00000493682 PCDHA4Q9UN74 947 aa19.56■□□□□ 0.72
COL9A1-210ENST00000493682 CYP3A7-CYP3A51PA0A087WV96 503 aa19.55■□□□□ 0.72
COL9A1-210ENST00000493682 IGKV6-21A0A0C4DH24 114 aa19.55■□□□□ 0.72
COL9A1-210ENST00000493682 TDP2O95551 362 aa19.55■□□□□ 0.72
COL9A1-210ENST00000493682 CYP3A7P24462 503 aa19.55■□□□□ 0.72
COL9A1-210ENST00000493682 BCAR1P56945 870 aa19.55■□□□□ 0.72
COL9A1-210ENST00000493682 CDC42EP1Q00587 391 aa19.55■□□□□ 0.72
COL9A1-210ENST00000493682 TRIM22Q8IYM9 498 aa19.55■□□□□ 0.72
COL9A1-210ENST00000493682 CASP10Q92851 521 aa19.55■□□□□ 0.72
COL9A1-210ENST00000493682 SH2D3AQ9BRG2 576 aa19.55■□□□□ 0.72
COL9A1-210ENST00000493682 MRPL9Q9BYD2 267 aaKnown RBP19.55■□□□□ 0.72
COL9A1-210ENST00000493682 C22orf23Q9BZE7 217 aa19.55■□□□□ 0.72
COL9A1-210ENST00000493682 CHST12Q9NRB3 414 aa19.55■□□□□ 0.72
COL9A1-210ENST00000493682 CDH22Q9UJ99 828 aa19.55■□□□□ 0.72
COL9A1-210ENST00000493682 HCFC2Q9Y5Z7 792 aa19.55■□□□□ 0.72
COL9A1-210ENST00000493682 A0A087WZ62 844 aa19.54■□□□□ 0.72
COL9A1-210ENST00000493682 NT5C1B-RDH14C9J2C7 533 aa19.54■□□□□ 0.72
COL9A1-210ENST00000493682 M0R2N6 131 aa19.54■□□□□ 0.72
COL9A1-210ENST00000493682 CLASP2O75122 1294 aaKnown RBP19.54■□□□□ 0.72
COL9A1-210ENST00000493682 REC8O95072 547 aa19.54■□□□□ 0.72
COL9A1-210ENST00000493682 SP100P23497 879 aaPredicted RBP19.54■□□□□ 0.72
COL9A1-210ENST00000493682 PHKA2P46019 1235 aa19.54■□□□□ 0.72
COL9A1-210ENST00000493682 ALDH7A1P49419 539 aaKnown RBP19.54■□□□□ 0.72
COL9A1-210ENST00000493682 SSRP1Q08945 709 aaKnown RBP19.54■□□□□ 0.72
COL9A1-210ENST00000493682 TOB2Q14106 344 aaPredicted RBP19.54■□□□□ 0.72
COL9A1-210ENST00000493682 TPRNQ4KMQ1 711 aa19.54■□□□□ 0.72
COL9A1-210ENST00000493682 PHOX2BQ99453 314 aa19.54■□□□□ 0.72
COL9A1-210ENST00000493682 PRRX2Q99811 253 aa19.54■□□□□ 0.72
COL9A1-210ENST00000493682 FDXACB1Q9BRP7 624 aaPredicted RBP19.54■□□□□ 0.72
COL9A1-210ENST00000493682 TRAIPQ9BWF2 469 aa19.54■□□□□ 0.72
COL9A1-210ENST00000493682 DNM2P50570 870 aa19.53■□□□□ 0.72
COL9A1-210ENST00000493682 PTPN5P54829 565 aa19.53■□□□□ 0.72
COL9A1-210ENST00000493682 RUFY3Q7L099 469 aa19.53■□□□□ 0.72
COL9A1-210ENST00000493682 BLIDQ8IZY5 108 aa19.53■□□□□ 0.72
COL9A1-210ENST00000493682 ETNPPLQ8TBG4 499 aa19.53■□□□□ 0.72
COL9A1-210ENST00000493682 MBOAT7Q96N66 472 aa19.53■□□□□ 0.72
COL9A1-210ENST00000493682 ADAM7Q9H2U9 754 aa19.53■□□□□ 0.72
COL9A1-210ENST00000493682 TSHZ2Q9NRE2 1034 aa19.53■□□□□ 0.72
COL9A1-210ENST00000493682 SUCLA2Q9P2R7 463 aaPredicted RBP19.53■□□□□ 0.72
COL9A1-210ENST00000493682 DDX11L8A8MPP1 907 aa19.52■□□□□ 0.72
COL9A1-210ENST00000493682 CXCL14O95715 111 aa19.52■□□□□ 0.72
COL9A1-210ENST00000493682 SFPQP23246 707 aaKnown RBP eCLIP19.52■□□□□ 0.72
COL9A1-210ENST00000493682 VCPP55072 806 aaKnown RBP19.52■□□□□ 0.72
COL9A1-210ENST00000493682 TCF15Q12870 199 aa19.52■□□□□ 0.72
COL9A1-210ENST00000493682 NPY5RQ15761 445 aa19.52■□□□□ 0.72
COL9A1-210ENST00000493682 LONRF3Q496Y0 759 aa19.52■□□□□ 0.72
COL9A1-210ENST00000493682 TWF2Q6IBS0 349 aaKnown RBP19.52■□□□□ 0.72
COL9A1-210ENST00000493682 CES5AQ6NT32 575 aa19.52■□□□□ 0.72
COL9A1-210ENST00000493682 ZNF410Q86VK4 478 aa19.52■□□□□ 0.72
COL9A1-210ENST00000493682 TMEM173Q86WV6 379 aaPredicted RBP19.52■□□□□ 0.72
COL9A1-210ENST00000493682 RHPN2Q8IUC4 686 aa19.52■□□□□ 0.72
COL9A1-210ENST00000493682 DAGLBQ8NCG7 672 aa19.52■□□□□ 0.72
COL9A1-210ENST00000493682 LPPQ93052 612 aa19.52■□□□□ 0.72
COL9A1-210ENST00000493682 TMEM169Q96HH4 297 aa19.52■□□□□ 0.72
COL9A1-210ENST00000493682 POMKQ9H5K3 350 aa19.52■□□□□ 0.72
COL9A1-210ENST00000493682 ZSWIM6Q9HCJ5 1215 aa19.52■□□□□ 0.72
COL9A1-210ENST00000493682 NR2E1Q9Y466 385 aa19.52■□□□□ 0.72
COL9A1-210ENST00000493682 ZC3H11AO75152 810 aaKnown RBP eCLIP19.51■□□□□ 0.71
COL9A1-210ENST00000493682 MAFO75444 373 aaPredicted RBP19.51■□□□□ 0.71
COL9A1-210ENST00000493682 DEXIO95424 95 aa19.51■□□□□ 0.71
COL9A1-210ENST00000493682 SKIP12755 728 aa19.51■□□□□ 0.71
COL9A1-210ENST00000493682 CA8P35219 290 aa19.51■□□□□ 0.71
COL9A1-210ENST00000493682 ITIH3Q06033 890 aa19.51■□□□□ 0.71
COL9A1-210ENST00000493682 BMS1Q14692 1282 aaKnown RBP19.51■□□□□ 0.71
COL9A1-210ENST00000493682 MOXD1Q6UVY6 613 aa19.51■□□□□ 0.71
COL9A1-210ENST00000493682 ANO5Q75V66 913 aa19.51■□□□□ 0.71
COL9A1-210ENST00000493682 ZBTB33Q86T24 672 aa19.51■□□□□ 0.71
COL9A1-210ENST00000493682 KSR1Q8IVT5 923 aa19.51■□□□□ 0.71
COL9A1-210ENST00000493682 VPS52Q8N1B4 723 aa19.51■□□□□ 0.71
COL9A1-210ENST00000493682 RSPH1Q8WYR4 309 aa19.51■□□□□ 0.71
COL9A1-210ENST00000493682 AIFM3Q96NN9 605 aa19.51■□□□□ 0.71
COL9A1-210ENST00000493682 NECTIN4Q96NY8 510 aa19.51■□□□□ 0.71
COL9A1-210ENST00000493682 LARP6Q9BRS8 491 aaKnown RBP19.51■□□□□ 0.71
COL9A1-210ENST00000493682 INO80BQ9C086 356 aaPredicted RBP19.51■□□□□ 0.71
COL9A1-210ENST00000493682 DDX25Q9UHL0 483 aaKnown RBP19.51■□□□□ 0.71
COL9A1-210ENST00000493682 PIN4Q9Y237 131 aaKnown RBP19.51■□□□□ 0.71
COL9A1-210ENST00000493682 KMT2EQ8IZD2 1858 aa19.5■□□□□ 0.71
COL9A1-210ENST00000493682 MEIS3P2A8K0S8 358 aa19.5■□□□□ 0.71
COL9A1-210ENST00000493682 CPLX1O14810 134 aa19.5■□□□□ 0.71
COL9A1-210ENST00000493682 PSMC5P62195 406 aa19.5■□□□□ 0.71
COL9A1-210ENST00000493682 NONOQ15233 471 aaKnown RBP eCLIP19.5■□□□□ 0.71
COL9A1-210ENST00000493682 NOMO2Q5JPE7 1267 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms