RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 MYL7Q01449 175 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 ENPEPQ07075 957 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 NAB2Q15742 525 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 FAM102BQ5T8I3 360 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 UTP14CQ5TAP6 766 aaKnown RBP11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 KCNN1Q92952 543 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 STK33Q9BYT3 514 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 FAM53CQ9NYF3 392 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 CAPN6Q9Y6Q1 641 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 IGSF9BQ9UPX0 1349 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 ARID2Q68CP9 1835 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 WDR81Q562E7 1941 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 CXCL11O14625 94 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 STBD1O95210 358 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 ZRANB2O95218 330 aaKnown RBP eCLIP11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 COPB2P35606 906 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 PEX3P56589 373 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 ITIH3Q06033 890 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 ABHD15Q6UXT9 468 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 MAEAQ7L5Y9 396 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 ZNF572Q7Z3I7 529 aaPredicted RBP11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 MAP4K3Q8IVH8 894 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 HNRNPLLQ8WVV9 542 aaKnown RBP11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 IKZF4Q9H2S9 585 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 MLXIPQ9HAP2 919 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 ZNF446Q9NWS9 450 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 RNF181Q9P0P0 153 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 A0A087X0T9 212 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 A0A0G2JLL6 359 aaPredicted RBP11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 IRF6O14896 467 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 MOCS3O95396 460 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 FAM228BP0C875 321 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 ACTR2P61160 394 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 PTK2Q05397 1052 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 PLA2G4FQ68DD2 849 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 PRRT2Q7Z6L0 340 aaPredicted RBP11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 ERO1BQ86YB8 467 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 TMEM161BQ8NDZ6 487 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 CEP170P1Q96L14 293 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 INTS2Q9H0H0 1204 aaKnown RBP11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 INTUQ9ULD6 942 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 USP20Q9Y2K6 914 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 HYOU1Q9Y4L1 999 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 ZNF862O60290 1169 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 SUPT20HL2P0C7V6 817 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 NF2P35240 595 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 VAMP7P51809 220 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 NPEPPSP55786 919 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 PRKG1Q13976 671 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 XKR3Q5GH77 459 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 ANKRD35Q8N283 1001 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 ZC3H15Q8WU90 426 aaKnown RBP11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 FHDC1Q9C0D6 1143 aaPredicted RBP11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 ANKZF1Q9H8Y5 726 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 PDLIM7Q9NR12 457 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 HSPBP1Q9NZL4 362 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 HDAC6Q9UBN7 1215 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 APEX2Q9UBZ4 518 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 ADAMTS1Q9UHI8 967 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 TBX20Q9UMR3 447 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 NENFQ9UMX5 172 aa11.76□□□□□ -0.53
PHACTR4-204ENST00000493669 SLC16A4O15374 487 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 ATG7O95352 703 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 SOX5P35711 763 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 IFI16Q16666 785 aaKnown RBP11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 TREML2Q5T2D2 321 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 CC2D1AQ6P1N0 951 aaPredicted RBP11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 ZNF571Q7Z3V5 609 aaPredicted RBP11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 ANKRD13AQ8IZ07 590 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 ARFGAP3Q9NP61 516 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 PCDHGC5Q9Y5F6 944 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 F8VZ95 297 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 ERLIN1O75477 346 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 EDNRBP24530 442 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 MCM3P25205 808 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 NPTX2P47972 431 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 ALDH5A1P51649 535 aaPredicted RBP11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 PRKCEQ02156 737 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 ARID5AQ03989 594 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 CBWD6Q4V339 395 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 CBWD3Q5JTY5 395 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 CBWD5Q5RIA9 395 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 SWSAP1Q6NVH7 229 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 USP50Q70EL3 339 aaPredicted RBP11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 L3MBTL3Q96JM7 780 aaPredicted RBP11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 ATP6V0A4Q9HBG4 840 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 GPRC5CQ9NQ84 441 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 KMT5AQ9NQR1 393 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 RNF14Q9UBS8 474 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 TMEM150BA6NC51 233 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 SPDYE5A6NIY4 337 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 ADM5C9JUS6 153 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 KIAA0753Q2KHM9 967 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 KRT222Q8N1A0 295 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 CBWD1Q9BRT8 395 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 SPATC1LQ9H0A9 340 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 CYP26B1Q9NR63 512 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 NAGPAQ9UK23 515 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms