RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 ARHGAP4P98171 946 aa8.04□□□□□ -1.12
CAB39-206ENST00000493540 PPFIA1Q13136 1202 aa8.04□□□□□ -1.12
CAB39-206ENST00000493540 GRIK4Q16099 956 aa8.04□□□□□ -1.12
CAB39-206ENST00000493540 USP17L6PQ6QN14 398 aa8.04□□□□□ -1.12
CAB39-206ENST00000493540 HFE2Q6ZVN8 426 aa8.04□□□□□ -1.12
CAB39-206ENST00000493540 SGMS1Q86VZ5 419 aa8.04□□□□□ -1.12
CAB39-206ENST00000493540 ANKMY2Q8IV38 441 aa8.04□□□□□ -1.12
CAB39-206ENST00000493540 SIX5Q8N196 739 aa8.04□□□□□ -1.12
CAB39-206ENST00000493540 LINC00528Q8N1L1 170 aa8.04□□□□□ -1.12
CAB39-206ENST00000493540 FIBCD1Q8N539 461 aa8.04□□□□□ -1.12
CAB39-206ENST00000493540 SRBD1Q8N5C6 995 aaKnown RBP8.04□□□□□ -1.12
CAB39-206ENST00000493540 TPCN2Q8NHX9 752 aa8.04□□□□□ -1.12
CAB39-206ENST00000493540 SUSD6Q92537 303 aa8.04□□□□□ -1.12
CAB39-206ENST00000493540 IL17RAQ96F46 866 aa8.04□□□□□ -1.12
CAB39-206ENST00000493540 TMX1Q9H3N1 280 aa8.04□□□□□ -1.12
CAB39-206ENST00000493540 ZNF395Q9H8N7 513 aaPredicted RBP8.04□□□□□ -1.12
CAB39-206ENST00000493540 ERAP1Q9NZ08 941 aa8.04□□□□□ -1.12
CAB39-206ENST00000493540 PLAGL2Q9UPG8 496 aa8.04□□□□□ -1.12
CAB39-206ENST00000493540 KIAA1024Q9UPX6 916 aa8.04□□□□□ -1.12
CAB39-206ENST00000493540 MRPL42Q9Y6G3 142 aaKnown RBP8.04□□□□□ -1.12
CAB39-206ENST00000493540 EP300Q09472 2414 aaPredicted RBP8.04□□□□□ -1.12
CAB39-206ENST00000493540 CACNA1IQ9P0X4 2223 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 COL1A2P08123 1366 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 ZBTB42B2RXF5 422 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 MAFGO15525 162 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 LINC01565O15544 149 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 BMP2P12643 396 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 GTF2F1P35269 517 aaKnown RBP eCLIP8.03□□□□□ -1.12
CAB39-206ENST00000493540 GDF10P55107 478 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 SEC13P55735 322 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 DPYDQ12882 1025 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 TRDNQ13061 729 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 SART3Q15020 963 aaKnown RBP8.03□□□□□ -1.12
CAB39-206ENST00000493540 B4GALNT3Q6L9W6 998 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 TMTC3Q6ZXV5 915 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 PLPPR4Q7Z2D5 763 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 ADGRD2Q7Z7M1 963 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 NPAS4Q8IUM7 802 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 EFHBQ8N7U6 833 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 EXOC6Q8TAG9 804 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 FAM200AQ8TCP9 573 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 SPPL3Q8TCT6 385 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 ATP8B4Q8TF62 1192 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 SEPT1Q8WYJ6 367 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 FBXL18Q96ME1 805 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 POP1Q99575 1024 aaKnown RBP8.03□□□□□ -1.12
CAB39-206ENST00000493540 LZTS2Q9BRK4 669 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 FTHL17Q9BXU8 183 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 LSG1Q9H089 658 aaKnown RBP8.03□□□□□ -1.12
CAB39-206ENST00000493540 ETNK1Q9HBU6 452 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 JADE2Q9NQC1 790 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 NOVA2Q9UNW9 492 aaKnown RBP8.03□□□□□ -1.12
CAB39-206ENST00000493540 FAM50BQ9Y247 325 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 PCDHA2Q9Y5H9 948 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 CDY2AQ9Y6F7 541 aa8.03□□□□□ -1.12
CAB39-206ENST00000493540 CITO14578 2027 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 IGLV3-22A0A075B6J6 115 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 SMIM35A0A1B0GVV1 85 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 RRN3P2A6NIE6 340 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 TMEM229AB2RXF0 380 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 BACH1O14867 736 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 FSCN2O14926 492 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 ST8SIA5O15466 376 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 SPINT1O43278 529 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 MGEA5O60502 916 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 DKK1O94907 266 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 KIF5BP33176 963 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 SLC26A2P50443 739 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 CLN3Q13286 438 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 ITGB3BPQ13352 177 aaPredicted RBP8.02□□□□□ -1.13
CAB39-206ENST00000493540 MTMR1Q13613 665 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 TMEM184AQ6ZMB5 413 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 NIPA1Q7RTP0 329 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 CATIPQ7Z7H3 387 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 RALYLQ86SE5 291 aaKnown RBP8.02□□□□□ -1.13
CAB39-206ENST00000493540 NLRX1Q86UT6 975 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 LINC01465Q8N7H1 131 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.02□□□□□ -1.13
CAB39-206ENST00000493540 VN1R2Q8NFZ6 395 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 RASGRP4Q8TDF6 673 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 TMEM40Q8WWA1 233 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 DNAJB3Q8WWF6 145 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 RRP36Q96EU6 259 aaKnown RBP8.02□□□□□ -1.13
CAB39-206ENST00000493540 ASIC4Q96FT7 647 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 TMEM87BQ96K49 555 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 MYL10Q9BUA6 226 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 SMARCAD1Q9H4L7 1026 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 ERVK-5Q9HDB9 667 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 JPH1Q9HDC5 661 aaPredicted RBP8.02□□□□□ -1.13
CAB39-206ENST00000493540 RAB6BQ9NRW1 208 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 CLDND1Q9NY35 253 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 RTEL1Q9NZ71 1219 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 RBM8AQ9Y5S9 174 aaKnown RBP8.02□□□□□ -1.13
CAB39-206ENST00000493540 COL4A2P08572 1712 aa8.02□□□□□ -1.13
CAB39-206ENST00000493540 ERICH2A1L162 156 aa8.01□□□□□ -1.13
CAB39-206ENST00000493540 C9IYK1 514 aa8.01□□□□□ -1.13
CAB39-206ENST00000493540 hCG_1984214I3L0E3 225 aa8.01□□□□□ -1.13
CAB39-206ENST00000493540 MEN1O00255 615 aa8.01□□□□□ -1.13
CAB39-206ENST00000493540 DHX15O43143 795 aaKnown RBP8.01□□□□□ -1.13
CAB39-206ENST00000493540 STAU1O95793 577 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms