RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 WEE2P0C1S8 567 aa19.96■□□□□ 0.79
NUP50-218ENST00000493456 CTSAP10619 480 aa19.96■□□□□ 0.79
NUP50-218ENST00000493456 CDC42EP1Q00587 391 aa19.96■□□□□ 0.79
NUP50-218ENST00000493456 PFKFB3Q16875 520 aaPredicted RBP19.96■□□□□ 0.79
NUP50-218ENST00000493456 ERMP1Q7Z2K6 904 aa19.96■□□□□ 0.79
NUP50-218ENST00000493456 PPFIBP1Q86W92 1011 aa19.96■□□□□ 0.79
NUP50-218ENST00000493456 REXO1Q8N1G1 1221 aaKnown RBP19.96■□□□□ 0.79
NUP50-218ENST00000493456 C12orf76Q8N812 135 aaPredicted RBP19.96■□□□□ 0.79
NUP50-218ENST00000493456 CCDC12Q8WUD4 166 aaPredicted RBP19.96■□□□□ 0.79
NUP50-218ENST00000493456 NLRP7Q8WX94 980 aa19.96■□□□□ 0.79
NUP50-218ENST00000493456 TRAIPQ9BWF2 469 aa19.96■□□□□ 0.79
NUP50-218ENST00000493456 ZMYND12Q9H0C1 365 aa19.96■□□□□ 0.79
NUP50-218ENST00000493456 ANO2Q9NQ90 1003 aa19.96■□□□□ 0.79
NUP50-218ENST00000493456 CYP26B1Q9NR63 512 aa19.96■□□□□ 0.79
NUP50-218ENST00000493456 CHST12Q9NRB3 414 aa19.96■□□□□ 0.79
NUP50-218ENST00000493456 MYO10Q9HD67 2058 aa19.96■□□□□ 0.79
NUP50-218ENST00000493456 DENND4AQ7Z401 1863 aa19.95■□□□□ 0.78
NUP50-218ENST00000493456 NT5C1B-RDH14C9J2C7 533 aa19.95■□□□□ 0.78
NUP50-218ENST00000493456 ZC3H11AO75152 810 aaKnown RBP eCLIP19.95■□□□□ 0.78
NUP50-218ENST00000493456 EPCAMP16422 314 aa19.95■□□□□ 0.78
NUP50-218ENST00000493456 PRKCEQ02156 737 aa19.95■□□□□ 0.78
NUP50-218ENST00000493456 PRR16Q569H4 304 aa19.95■□□□□ 0.78
NUP50-218ENST00000493456 FRMD5Q7Z6J6 570 aa19.95■□□□□ 0.78
NUP50-218ENST00000493456 DDX53Q86TM3 631 aaKnown RBP19.95■□□□□ 0.78
NUP50-218ENST00000493456 CABP7Q86V35 215 aa19.95■□□□□ 0.78
NUP50-218ENST00000493456 ACSF2Q96CM8 615 aaPredicted RBP19.95■□□□□ 0.78
NUP50-218ENST00000493456 SFXN1Q9H9B4 322 aa19.95■□□□□ 0.78
NUP50-218ENST00000493456 C6orf50Q9HD87 102 aa19.95■□□□□ 0.78
NUP50-218ENST00000493456 STK39Q9UEW8 545 aa19.95■□□□□ 0.78
NUP50-218ENST00000493456 BRPF3Q9ULD4 1205 aa19.95■□□□□ 0.78
NUP50-218ENST00000493456 ZNF292O60281 2723 aa19.95■□□□□ 0.78
NUP50-218ENST00000493456 ZNF862O60290 1169 aa19.94■□□□□ 0.78
NUP50-218ENST00000493456 SKIP12755 728 aa19.94■□□□□ 0.78
NUP50-218ENST00000493456 CIITAP33076 1130 aa19.94■□□□□ 0.78
NUP50-218ENST00000493456 PHKA2P46019 1235 aa19.94■□□□□ 0.78
NUP50-218ENST00000493456 EXOSC10Q01780 885 aaKnown RBP19.94■□□□□ 0.78
NUP50-218ENST00000493456 TBC1D8BQ0IIM8 1120 aa19.94■□□□□ 0.78
NUP50-218ENST00000493456 CWF19L1Q69YN2 538 aaKnown RBP19.94■□□□□ 0.78
NUP50-218ENST00000493456 DHX32Q7L7V1 743 aaKnown RBP19.94■□□□□ 0.78
NUP50-218ENST00000493456 SLC22A17Q8WUG5 538 aa19.94■□□□□ 0.78
NUP50-218ENST00000493456 IGSF21Q96ID5 467 aa19.94■□□□□ 0.78
NUP50-218ENST00000493456 ZNF668Q96K58 619 aaPredicted RBP19.94■□□□□ 0.78
NUP50-218ENST00000493456 GCOM2Q9BZD3 368 aaPredicted RBP19.94■□□□□ 0.78
NUP50-218ENST00000493456 DISC1Q9NRI5 854 aa19.94■□□□□ 0.78
NUP50-218ENST00000493456 KLF18A0A0U1RQI7 1052 aa19.93■□□□□ 0.78
NUP50-218ENST00000493456 AOC1P19801 751 aa19.93■□□□□ 0.78
NUP50-218ENST00000493456 FGFR4P22455 802 aa19.93■□□□□ 0.78
NUP50-218ENST00000493456 SFPQP23246 707 aaKnown RBP eCLIP19.93■□□□□ 0.78
NUP50-218ENST00000493456 GNA11P29992 359 aa19.93■□□□□ 0.78
NUP50-218ENST00000493456 CDC27P30260 824 aa19.93■□□□□ 0.78
NUP50-218ENST00000493456 SFNP31947 248 aa19.93■□□□□ 0.78
NUP50-218ENST00000493456 GLB1LQ6UWU2 654 aa19.93■□□□□ 0.78
NUP50-218ENST00000493456 CCDC149Q6ZUS6 474 aa19.93■□□□□ 0.78
NUP50-218ENST00000493456 OTOP3Q7RTS5 596 aa19.93■□□□□ 0.78
NUP50-218ENST00000493456 TMEM173Q86WV6 379 aaPredicted RBP19.93■□□□□ 0.78
NUP50-218ENST00000493456 AUTS2Q8WXX7 1259 aa19.93■□□□□ 0.78
NUP50-218ENST00000493456 LENG9Q96B70 501 aa19.93■□□□□ 0.78
NUP50-218ENST00000493456 FAM217BQ9NTX9 383 aaPredicted RBP19.93■□□□□ 0.78
NUP50-218ENST00000493456 GVINP1Q7Z2Y8 2422 aa19.93■□□□□ 0.78
NUP50-218ENST00000493456 CCDC196A0A1B0GTZ2 297 aa19.92■□□□□ 0.78
NUP50-218ENST00000493456 TDGQ13569 410 aa19.92■□□□□ 0.78
NUP50-218ENST00000493456 TMC5Q6UXY8 1006 aa19.92■□□□□ 0.78
NUP50-218ENST00000493456 GPR149Q86SP6 731 aa19.92■□□□□ 0.78
NUP50-218ENST00000493456 CCDC105Q8IYK2 499 aa19.92■□□□□ 0.78
NUP50-218ENST00000493456 FLCNQ8NFG4 579 aa19.92■□□□□ 0.78
NUP50-218ENST00000493456 TCEANC2Q96MN5 208 aa19.92■□□□□ 0.78
NUP50-218ENST00000493456 RTP3Q9BQQ7 232 aa19.92■□□□□ 0.78
NUP50-218ENST00000493456 DUSP12Q9UNI6 340 aa19.92■□□□□ 0.78
NUP50-218ENST00000493456 DNAH14Q0VDD8 3507 aa19.92■□□□□ 0.78
NUP50-218ENST00000493456 RAB27AP51159 221 aa19.91■□□□□ 0.78
NUP50-218ENST00000493456 JAK3P52333 1124 aa19.91■□□□□ 0.78
NUP50-218ENST00000493456 PTPN14Q15678 1187 aa19.91■□□□□ 0.78
NUP50-218ENST00000493456 NOMO2Q5JPE7 1267 aa19.91■□□□□ 0.78
NUP50-218ENST00000493456 TWF2Q6IBS0 349 aaKnown RBP19.91■□□□□ 0.78
NUP50-218ENST00000493456 KANK3Q6NY19 840 aa19.91■□□□□ 0.78
NUP50-218ENST00000493456 ADSSL1Q8N142 457 aa19.91■□□□□ 0.78
NUP50-218ENST00000493456 BICD2Q8TD16 824 aa19.91■□□□□ 0.78
NUP50-218ENST00000493456 RIT2Q99578 217 aa19.91■□□□□ 0.78
NUP50-218ENST00000493456 INO80BQ9C086 356 aaPredicted RBP19.91■□□□□ 0.78
NUP50-218ENST00000493456 NRDE2Q9H7Z3 1164 aa19.91■□□□□ 0.78
NUP50-218ENST00000493456 TBC1D13Q9NVG8 400 aa19.91■□□□□ 0.78
NUP50-218ENST00000493456 WDR81Q562E7 1941 aa19.91■□□□□ 0.78
NUP50-218ENST00000493456 CACNA1AO00555 2505 aa19.91■□□□□ 0.78
NUP50-218ENST00000493456 SPDYE4A6NLX3 237 aa19.9■□□□□ 0.78
NUP50-218ENST00000493456 GAS7O60861 476 aa19.9■□□□□ 0.78
NUP50-218ENST00000493456 GALTP07902 379 aa19.9■□□□□ 0.78
NUP50-218ENST00000493456 ID4P47928 161 aa19.9■□□□□ 0.78
NUP50-218ENST00000493456 DNM2P50570 870 aa19.9■□□□□ 0.78
NUP50-218ENST00000493456 RNASELQ05823 741 aaKnown RBP19.9■□□□□ 0.78
NUP50-218ENST00000493456 TARBP2Q15633 366 aaKnown RBP19.9■□□□□ 0.78
NUP50-218ENST00000493456 UGCGQ16739 394 aa19.9■□□□□ 0.78
NUP50-218ENST00000493456 C15orf39Q6ZRI6 1047 aa19.9■□□□□ 0.78
NUP50-218ENST00000493456 ZNF410Q86VK4 478 aa19.9■□□□□ 0.78
NUP50-218ENST00000493456 EMILIN2Q9BXX0 1053 aa19.9■□□□□ 0.78
NUP50-218ENST00000493456 FAM105AQ9NUU6 356 aa19.9■□□□□ 0.78
NUP50-218ENST00000493456 PIN4Q9Y237 131 aaKnown RBP19.9■□□□□ 0.78
NUP50-218ENST00000493456 MSH4O15457 936 aa19.89■□□□□ 0.77
NUP50-218ENST00000493456 ZNF623O75123 536 aa19.89■□□□□ 0.77
NUP50-218ENST00000493456 CSDE1O75534 798 aaKnown RBP19.89■□□□□ 0.77
NUP50-218ENST00000493456 NPR3P17342 541 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms