RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 DEPTORQ8TB45 409 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 SMARCE1Q969G3 411 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 ZBTB10Q96DT7 871 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 SCLT1Q96NL6 688 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 NTPCRQ9BSD7 190 aaKnown RBP12.77□□□□□ -0.37
LSM2-214ENST00000493387 NFKBIZQ9BYH8 718 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 CELF4Q9BZC1 486 aaKnown RBP12.77□□□□□ -0.37
LSM2-214ENST00000493387 GCOM2Q9BZD3 368 aaPredicted RBP12.77□□□□□ -0.37
LSM2-214ENST00000493387 INO80BQ9C086 356 aaPredicted RBP12.77□□□□□ -0.37
LSM2-214ENST00000493387 C2orf40Q9H1Z8 148 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 BLZF1Q9H2G9 400 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 GPRC5CQ9NQ84 441 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 TMEM39AQ9NV64 488 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 EXOC1Q9NV70 894 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 TRPV2Q9Y5S1 764 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 TRIP12Q14669 1992 aaPredicted RBP12.77□□□□□ -0.37
LSM2-214ENST00000493387 ARID2Q68CP9 1835 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 RSPH10B2B2RC85 870 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 TRAK2O60296 914 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 VTNP04004 478 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 RPN1P04843 607 aaKnown RBP12.76□□□□□ -0.37
LSM2-214ENST00000493387 RSPH10BP0C881 870 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 CKBP12277 381 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 SELPP16109 830 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 GPC3P51654 580 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 EFNA5P52803 228 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 CRYBB1P53674 252 aaPredicted RBP12.76□□□□□ -0.37
LSM2-214ENST00000493387 PEX3P56589 373 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 NLRP11P59045 1033 aaKnown RBP12.76□□□□□ -0.37
LSM2-214ENST00000493387 COASYQ13057 564 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 PNOCQ13519 176 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 ALCAMQ13740 583 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 PCBP1Q15365 356 aaKnown RBP eCLIP12.76□□□□□ -0.37
LSM2-214ENST00000493387 STXBP4Q6ZWJ1 553 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 SRGAP1Q7Z6B7 1085 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 IFNLR1Q8IU57 520 aaPredicted RBP12.76□□□□□ -0.37
LSM2-214ENST00000493387 ZBTB8OSQ8IWT0 167 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 FAM178BQ8IXR5 827 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 RNF149Q8NC42 400 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 SPATA20Q8TB22 786 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 ASAP3Q8TDY4 903 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 NLRP7Q8WX94 980 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 DHX38Q92620 1227 aaKnown RBP12.76□□□□□ -0.37
LSM2-214ENST00000493387 KCNN1Q92952 543 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 NOC4LQ9BVI4 516 aaKnown RBP12.76□□□□□ -0.37
LSM2-214ENST00000493387 ADAMTS10Q9H324 1103 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 HIPK3Q9H422 1215 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 KMT5AQ9NQR1 393 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 OLFML3Q9NRN5 406 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 PRKAG2Q9UGJ0 569 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 TBX21Q9UL17 535 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 SQORQ9Y6N5 450 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 EVPLQ92817 2033 aa12.76□□□□□ -0.37
LSM2-214ENST00000493387 LRRIQ4A6NIV6 560 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 CCDC169A6NNP5 214 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 SFI1A8K8P3 1242 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 KIAA0355O15063 1070 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 KLRC4O43908 158 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 GPR32O75388 356 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 RHOBTB3O94955 611 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 LETM1O95202 739 aaPredicted RBP12.75□□□□□ -0.37
LSM2-214ENST00000493387 PRR29P0C7W0 189 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 SRGAP2CP0DJJ0 459 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 NPTX2P47972 431 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 SARSP49591 514 aaKnown RBP12.75□□□□□ -0.37
LSM2-214ENST00000493387 PTENP60484 403 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 CAPSQ13938 189 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 CAMK4Q16566 473 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 KMT5BQ4FZB7 885 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 FAM26FQ5R3K3 315 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 NT5DC1Q5TFE4 455 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 SFR1Q86XK3 245 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 TRIML1Q8N9V2 468 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 USP38Q8NB14 1042 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 NLRP4Q96MN2 994 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 ST6GALNAC4Q9H4F1 302 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 TMEM134Q9H6X4 195 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 MRPL44Q9H9J2 332 aaKnown RBP12.75□□□□□ -0.37
LSM2-214ENST00000493387 KIAA1468Q9P260 1216 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 PCDHB13Q9Y5F0 798 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 PCDHA5Q9Y5H7 936 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 CDY2AQ9Y6F7 541 aa12.75□□□□□ -0.37
LSM2-214ENST00000493387 A0A087WZ62 844 aa12.74□□□□□ -0.37
LSM2-214ENST00000493387 EVI5O60447 810 aa12.74□□□□□ -0.37
LSM2-214ENST00000493387 KIF20AO95235 890 aa12.74□□□□□ -0.37
LSM2-214ENST00000493387 DARSP14868 501 aaKnown RBP12.74□□□□□ -0.37
LSM2-214ENST00000493387 EIF4BP23588 611 aaKnown RBP12.74□□□□□ -0.37
LSM2-214ENST00000493387 CASP1P29466 404 aa12.74□□□□□ -0.37
LSM2-214ENST00000493387 EHHADHQ08426 723 aa12.74□□□□□ -0.37
LSM2-214ENST00000493387 MGAT3Q09327 533 aa12.74□□□□□ -0.37
LSM2-214ENST00000493387 KIZQ2M2Z5 673 aa12.74□□□□□ -0.37
LSM2-214ENST00000493387 ZNF618Q5T7W0 954 aa12.74□□□□□ -0.37
LSM2-214ENST00000493387 CDCA2Q69YH5 1023 aaPredicted RBP12.74□□□□□ -0.37
LSM2-214ENST00000493387 LRRC8DQ7L1W4 858 aa12.74□□□□□ -0.37
LSM2-214ENST00000493387 KSR1Q8IVT5 923 aa12.74□□□□□ -0.37
LSM2-214ENST00000493387 BSNDQ8WZ55 320 aa12.74□□□□□ -0.37
LSM2-214ENST00000493387 WNT8BQ93098 351 aa12.74□□□□□ -0.37
LSM2-214ENST00000493387 HVCN1Q96D96 273 aa12.74□□□□□ -0.37
LSM2-214ENST00000493387 FDXACB1Q9BRP7 624 aaPredicted RBP12.74□□□□□ -0.37
LSM2-214ENST00000493387 POLD4Q9HCU8 107 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms