RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 NONOQ15233 471 aaKnown RBP eCLIP7.63□□□□□ -1.19
VPS52-219ENST00000493379 RAB30Q15771 203 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 ECM1Q16610 540 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 HSDL1Q3SXM5 330 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 EARS2Q5JPH6 523 aaKnown RBP7.63□□□□□ -1.19
VPS52-219ENST00000493379 TMEM240Q5SV17 173 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 RASIP1Q5U651 963 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 ANO1Q5XXA6 986 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 NOL8Q76FK4 1167 aaKnown RBP7.63□□□□□ -1.19
VPS52-219ENST00000493379 DHX37Q8IY37 1157 aaKnown RBP7.63□□□□□ -1.19
VPS52-219ENST00000493379 ADSSL1Q8N142 457 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.63□□□□□ -1.19
VPS52-219ENST00000493379 TBCKQ8TEA7 893 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 SCG3Q8WXD2 468 aaKnown RBP7.63□□□□□ -1.19
VPS52-219ENST00000493379 KAT2BQ92831 832 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 LENG1Q96BZ8 264 aaPredicted RBP7.63□□□□□ -1.19
VPS52-219ENST00000493379 RIT2Q99578 217 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 GPR20Q99678 358 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 C16orf70Q9BSU1 422 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 AP5M1Q9H0R1 490 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 TSPAN10Q9H1Z9 355 aaPredicted RBP7.63□□□□□ -1.19
VPS52-219ENST00000493379 BCAS3Q9H6U6 928 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 AGO4Q9HCK5 861 aaKnown RBP7.63□□□□□ -1.19
VPS52-219ENST00000493379 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.63□□□□□ -1.19
VPS52-219ENST00000493379 MRVI1Q9Y6F6 885 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 ASPMQ8IZT6 3477 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 MCM3APO60318 1980 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 GSTTP1A0A1W2PQM5 241 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 ARVCFO00192 962 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 PSMD10O75832 226 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 GGPS1O95749 300 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 F2P00734 622 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 CD4P01730 458 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 MMP3P08254 477 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 C6orf222P0C671 652 aaPredicted RBP7.62□□□□□ -1.19
VPS52-219ENST00000493379 PTGS1P23219 599 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 KRT2P35908 639 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 TRAPPC10P48553 1259 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 VCPP55072 806 aaKnown RBP7.62□□□□□ -1.19
VPS52-219ENST00000493379 SETQ01105 290 aaPredicted RBP7.62□□□□□ -1.19
VPS52-219ENST00000493379 ITGB3BPQ13352 177 aaPredicted RBP7.62□□□□□ -1.19
VPS52-219ENST00000493379 ORC2Q13416 577 aaPredicted RBP7.62□□□□□ -1.19
VPS52-219ENST00000493379 DGKDQ16760 1214 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 BRDTQ58F21 947 aaPredicted RBP7.62□□□□□ -1.19
VPS52-219ENST00000493379 NFRKBQ6P4R8 1299 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 NEK8Q86SG6 692 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 GLYCTKQ8IVS8 523 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 DIS3L2Q8IYB7 885 aaKnown RBP7.62□□□□□ -1.19
VPS52-219ENST00000493379 OR6J1Q8NGC5 347 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 ETNPPLQ8TBG4 499 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 RASGRP4Q8TDF6 673 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 AFG1LQ8WV93 481 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 SEPT1Q8WYJ6 367 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 SLC5A5Q92911 643 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 PGBD1Q96JS3 809 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 C8orf76Q96K31 380 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 FAM20AQ96MK3 541 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 GLT1D1Q96MS3 346 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 NAP1L4Q99733 375 aaKnown RBP7.62□□□□□ -1.19
VPS52-219ENST00000493379 KCNMB3Q9NPA1 279 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 TBC1D22BQ9NU19 505 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 PGPEP1Q9NXJ5 209 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 KIF3AQ9Y496 699 aa7.62□□□□□ -1.19
VPS52-219ENST00000493379 A0A0U1RQG5 324 aaPredicted RBP7.61□□□□□ -1.19
VPS52-219ENST00000493379 IPO5O00410 1097 aaKnown RBP7.61□□□□□ -1.19
VPS52-219ENST00000493379 MSH4O15457 936 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 DTNBO60941 627 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 CLTBP09497 229 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 GJB2P29033 226 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 ADAM17P78536 824 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 BEX3Q00994 111 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 MTMR3Q13615 1198 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 ITGA7Q13683 1181 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 NAA30Q147X3 362 aaPredicted RBP7.61□□□□□ -1.19
VPS52-219ENST00000493379 INF2Q27J81 1249 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 ZNF746Q6NUN9 644 aaPredicted RBP7.61□□□□□ -1.19
VPS52-219ENST00000493379 ABHD15Q6UXT9 468 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 CYFIP1Q7L576 1253 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 PLPPR4Q7Z2D5 763 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 PLA2G4DQ86XP0 818 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 NOSTRINQ8IVI9 506 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 AFAP1L1Q8TED9 768 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 HAS1Q92839 578 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 SPATA33Q96N06 139 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 MTMR9Q96QG7 549 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 MTG1Q9BT17 334 aaPredicted RBP7.61□□□□□ -1.19
VPS52-219ENST00000493379 MLXIPQ9HAP2 919 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 BRMS1Q9HCU9 246 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 SCHIP1Q9P0W5 487 aaPredicted RBP7.61□□□□□ -1.19
VPS52-219ENST00000493379 MUTYHQ9UIF7 546 aa7.61□□□□□ -1.19
VPS52-219ENST00000493379 KIAA1217Q5T5P2 1943 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 EMSYQ7Z589 1322 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 CCDC194A0A1B0GVG4 234 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 A6NJY4 79 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 KIAA0355O15063 1070 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 POU3F3P20264 500 aaPredicted RBP7.6□□□□□ -1.19
VPS52-219ENST00000493379 PDCP20941 246 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 SLC26A2P50443 739 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 TOB1P50616 345 aaPredicted RBP7.6□□□□□ -1.19
VPS52-219ENST00000493379 SMTNP53814 917 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms