RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 PCDHB4Q9Y5E5 795 aa5.65□□□□□ -1.5
VPS13A-212ENST00000493341 PITPNM2Q9BZ72 1349 aa5.65□□□□□ -1.5
VPS13A-212ENST00000493341 PRLP01236 227 aa5.65□□□□□ -1.51
VPS13A-212ENST00000493341 GSPT1P15170 499 aaKnown RBP5.65□□□□□ -1.51
VPS13A-212ENST00000493341 MAPK9P45984 424 aa5.65□□□□□ -1.51
VPS13A-212ENST00000493341 RGS3P49796 1198 aa5.65□□□□□ -1.51
VPS13A-212ENST00000493341 MAPK10P53779 464 aa5.65□□□□□ -1.51
VPS13A-212ENST00000493341 HERVK_113P62684 666 aa5.65□□□□□ -1.51
VPS13A-212ENST00000493341 TNFAIP2Q03169 654 aa5.65□□□□□ -1.51
VPS13A-212ENST00000493341 PCGF5Q86SE9 256 aa5.65□□□□□ -1.51
VPS13A-212ENST00000493341 CABP7Q86V35 215 aa5.65□□□□□ -1.51
VPS13A-212ENST00000493341 CLASRPQ8N2M8 674 aaKnown RBP5.65□□□□□ -1.51
VPS13A-212ENST00000493341 PHOSPHO1Q8TCT1 267 aa5.65□□□□□ -1.51
VPS13A-212ENST00000493341 KAT5Q92993 513 aa5.65□□□□□ -1.51
VPS13A-212ENST00000493341 PHKBQ93100 1093 aa5.65□□□□□ -1.51
VPS13A-212ENST00000493341 FATE1Q969F0 183 aa5.65□□□□□ -1.51
VPS13A-212ENST00000493341 HDAC10Q969S8 669 aa5.65□□□□□ -1.51
VPS13A-212ENST00000493341 G6PC3Q9BUM1 346 aa5.65□□□□□ -1.51
VPS13A-212ENST00000493341 METTL22Q9BUU2 404 aaPredicted RBP5.65□□□□□ -1.51
VPS13A-212ENST00000493341 MYLK2Q9H1R3 596 aa5.65□□□□□ -1.51
VPS13A-212ENST00000493341 SAGE1Q9NXZ1 904 aa5.65□□□□□ -1.51
VPS13A-212ENST00000493341 ZC3H7BQ9UGR2 993 aaKnown RBP5.65□□□□□ -1.51
VPS13A-212ENST00000493341 ASB1Q9Y576 335 aa5.65□□□□□ -1.51
VPS13A-212ENST00000493341 AGR2O95994 175 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 PFKMP08237 780 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 MSL3P1P0C860 447 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 SRGNP10124 158 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 MYF5P13349 255 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 GRK6P43250 576 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 CASP5P51878 434 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 MVKQ03426 396 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 ADRM1Q16186 407 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 APOA5Q6Q788 366 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 NETO1Q8TDF5 533 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 PCDHA13Q9Y5I0 950 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 TAF6LQ9Y6J9 622 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 SLC4A7Q9Y6M7 1214 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 MYPNQ86TC9 1320 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 TMEM265A0A087WTH1 108 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 IL12RB1P42701 662 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 STT3AP46977 705 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 MAP2K6P52564 334 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 RAB1AP62820 205 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 ROM1Q03395 351 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 SIM2Q14190 667 aaPredicted RBP5.64□□□□□ -1.51
VPS13A-212ENST00000493341 KIR3DS1Q14943 382 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 SNX17Q15036 470 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 SLC14A2Q15849 920 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 MUM1L1Q5H9M0 696 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 IZUMO3Q5VZ72 239 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 KLHDC10Q6PID8 442 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 MIGA2Q7L4E1 593 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 GPR155Q7Z3F1 870 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 SAPCD2Q86UD0 394 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 LIX1LQ8IVB5 337 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 NUP43Q8NFH3 380 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 PLBD2Q8NHP8 589 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 GAB3Q8WWW8 586 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 RGMAQ96B86 450 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 ASIC4Q96FT7 647 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 CDK5RAP3Q96JB5 506 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 C22orf23Q9BZE7 217 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 LRRC27Q9C0I9 530 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 AP5M1Q9H0R1 490 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 MTG2Q9H4K7 406 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 C14orf93Q9H972 538 aaKnown RBP5.64□□□□□ -1.51
VPS13A-212ENST00000493341 ZMAT3Q9HA38 289 aaKnown RBP5.64□□□□□ -1.51
VPS13A-212ENST00000493341 RXFP1Q9HBX9 757 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 DCP1AQ9NPI6 582 aaPredicted RBP5.64□□□□□ -1.51
VPS13A-212ENST00000493341 STAP2Q9UGK3 403 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 EVLQ9UI08 416 aaPredicted RBP5.64□□□□□ -1.51
VPS13A-212ENST00000493341 PALD1Q9ULE6 856 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 MAGED2Q9UNF1 606 aaPredicted RBP5.64□□□□□ -1.51
VPS13A-212ENST00000493341 CDY2AQ9Y6F7 541 aa5.64□□□□□ -1.51
VPS13A-212ENST00000493341 TLR5O60602 858 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 CELA3BP08861 270 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 PRKCAP17252 672 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 MAN1A1P33908 653 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 SLC6A11P48066 632 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 GPSM2P81274 684 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 CCDC38Q502W7 563 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 DGKKQ5KSL6 1271 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 RNF43Q68DV7 783 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 BICRALQ6AI39 1079 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 LVRNQ6Q4G3 990 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 ARRDC4Q8NCT1 418 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 ASB11Q8WXH4 323 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 LINC01599Q8WXQ3 324 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 APIPQ96GX9 242 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 MPP4Q96JB8 637 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 EIF2AK1Q9BQI3 630 aaKnown RBP5.63□□□□□ -1.51
VPS13A-212ENST00000493341 ADI1Q9BV57 179 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 PCDHGB2Q9Y5G2 931 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 SNX11Q9Y5W9 270 aa5.63□□□□□ -1.51
VPS13A-212ENST00000493341 A0A088AWK7 358 aa5.62□□□□□ -1.51
VPS13A-212ENST00000493341 TCRBV5S2A0A599 114 aa5.62□□□□□ -1.51
VPS13A-212ENST00000493341 POM121BA6NF01 834 aa5.62□□□□□ -1.51
VPS13A-212ENST00000493341 SGSM2O43147 1006 aa5.62□□□□□ -1.51
VPS13A-212ENST00000493341 COL6A1P12109 1028 aa5.62□□□□□ -1.51
VPS13A-212ENST00000493341 NOLC1Q14978 699 aaKnown RBP eCLIP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms