RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 SH2D3AQ9BRG2 576 aa15.47■□□□□ 0.07
SAMM50-204ENST00000493161 UNC45AQ9H3U1 944 aa15.47■□□□□ 0.07
SAMM50-204ENST00000493161 NRBP2Q9NSY0 501 aa15.47■□□□□ 0.07
SAMM50-204ENST00000493161 LIMD1Q9UGP4 676 aa15.47■□□□□ 0.07
SAMM50-204ENST00000493161 MYO15AQ9UKN7 3530 aa15.47■□□□□ 0.07
SAMM50-204ENST00000493161 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.46■□□□□ 0.07
SAMM50-204ENST00000493161 WDR64B1ANS9 1081 aa15.46■□□□□ 0.07
SAMM50-204ENST00000493161 EOMESO95936 686 aa15.46■□□□□ 0.07
SAMM50-204ENST00000493161 ALDH7A1P49419 539 aaKnown RBP15.46■□□□□ 0.07
SAMM50-204ENST00000493161 TARBP2Q15633 366 aaKnown RBP15.46■□□□□ 0.07
SAMM50-204ENST00000493161 ASCL5Q7RTU5 278 aa15.46■□□□□ 0.07
SAMM50-204ENST00000493161 UBALD2Q8IYN6 164 aa15.46■□□□□ 0.07
SAMM50-204ENST00000493161 NECTIN4Q96NY8 510 aa15.46■□□□□ 0.07
SAMM50-204ENST00000493161 CEP89Q96ST8 783 aa15.46■□□□□ 0.07
SAMM50-204ENST00000493161 ZBP1Q9H171 429 aa15.46■□□□□ 0.07
SAMM50-204ENST00000493161 MYO10Q9HD67 2058 aa15.45■□□□□ 0.06
SAMM50-204ENST00000493161 PRPF3O43395 683 aaKnown RBP15.45■□□□□ 0.06
SAMM50-204ENST00000493161 B4GALT3O60512 393 aa15.45■□□□□ 0.06
SAMM50-204ENST00000493161 ZC3H11AO75152 810 aaKnown RBP eCLIP15.45■□□□□ 0.06
SAMM50-204ENST00000493161 STBD1O95210 358 aa15.45■□□□□ 0.06
SAMM50-204ENST00000493161 PHKA2P46019 1235 aa15.45■□□□□ 0.06
SAMM50-204ENST00000493161 RCAN1P53805 252 aa15.45■□□□□ 0.06
SAMM50-204ENST00000493161 TBC1D8BQ0IIM8 1120 aa15.45■□□□□ 0.06
SAMM50-204ENST00000493161 Q6ZUG5 572 aa15.45■□□□□ 0.06
SAMM50-204ENST00000493161 SLC22A17Q8WUG5 538 aa15.45■□□□□ 0.06
SAMM50-204ENST00000493161 SLC5A5Q92911 643 aa15.45■□□□□ 0.06
SAMM50-204ENST00000493161 BRF1Q92994 677 aa15.45■□□□□ 0.06
SAMM50-204ENST00000493161 TMEM169Q96HH4 297 aa15.45■□□□□ 0.06
SAMM50-204ENST00000493161 CCDC136Q96JN2 1154 aa15.45■□□□□ 0.06
SAMM50-204ENST00000493161 VN1R3Q9BXE9 311 aa15.45■□□□□ 0.06
SAMM50-204ENST00000493161 CACNA1HO95180 2353 aa15.44■□□□□ 0.06
SAMM50-204ENST00000493161 A0A087WZ62 844 aa15.44■□□□□ 0.06
SAMM50-204ENST00000493161 PROB1E7EW31 1015 aa15.44■□□□□ 0.06
SAMM50-204ENST00000493161 GAS7O60861 476 aa15.44■□□□□ 0.06
SAMM50-204ENST00000493161 MTHFRP42898 656 aa15.44■□□□□ 0.06
SAMM50-204ENST00000493161 MTERF2Q49AM1 385 aa15.44■□□□□ 0.06
SAMM50-204ENST00000493161 MCTP2Q6DN12 878 aa15.44■□□□□ 0.06
SAMM50-204ENST00000493161 IGSF21Q96ID5 467 aa15.44■□□□□ 0.06
SAMM50-204ENST00000493161 FDXACB1Q9BRP7 624 aaPredicted RBP15.44■□□□□ 0.06
SAMM50-204ENST00000493161 MRPL9Q9BYD2 267 aaKnown RBP15.44■□□□□ 0.06
SAMM50-204ENST00000493161 NRDE2Q9H7Z3 1164 aa15.44■□□□□ 0.06
SAMM50-204ENST00000493161 TBC1D13Q9NVG8 400 aa15.44■□□□□ 0.06
SAMM50-204ENST00000493161 VPS54Q9P1Q0 977 aa15.44■□□□□ 0.06
SAMM50-204ENST00000493161 DNAJB4Q9UDY4 337 aa15.44■□□□□ 0.06
SAMM50-204ENST00000493161 CCDC196A0A1B0GTZ2 297 aa15.43■□□□□ 0.06
SAMM50-204ENST00000493161 GALTP07902 379 aa15.43■□□□□ 0.06
SAMM50-204ENST00000493161 GNA11P29992 359 aa15.43■□□□□ 0.06
SAMM50-204ENST00000493161 NUBP1P53384 320 aa15.43■□□□□ 0.06
SAMM50-204ENST00000493161 FGD1P98174 961 aa15.43■□□□□ 0.06
SAMM50-204ENST00000493161 NTRK3Q16288 839 aa15.43■□□□□ 0.06
SAMM50-204ENST00000493161 BMP2KLQ5H9B9 411 aa15.43■□□□□ 0.06
SAMM50-204ENST00000493161 LRCH2Q5VUJ6 765 aa15.43■□□□□ 0.06
SAMM50-204ENST00000493161 ASTLQ6HA08 431 aaPredicted RBP15.43■□□□□ 0.06
SAMM50-204ENST00000493161 KIAA1841Q6NSI8 718 aa15.43■□□□□ 0.06
SAMM50-204ENST00000493161 TMC5Q6UXY8 1006 aa15.43■□□□□ 0.06
SAMM50-204ENST00000493161 DDX53Q86TM3 631 aaKnown RBP15.43■□□□□ 0.06
SAMM50-204ENST00000493161 KSR1Q8IVT5 923 aa15.43■□□□□ 0.06
SAMM50-204ENST00000493161 ZDHHC14Q8IZN3 488 aa15.43■□□□□ 0.06
SAMM50-204ENST00000493161 ZNF710Q8N1W2 664 aa15.43■□□□□ 0.06
SAMM50-204ENST00000493161 TDRD5Q8NAT2 981 aaKnown RBP15.43■□□□□ 0.06
SAMM50-204ENST00000493161 CCDC12Q8WUD4 166 aaPredicted RBP15.43■□□□□ 0.06
SAMM50-204ENST00000493161 RIT2Q99578 217 aa15.43■□□□□ 0.06
SAMM50-204ENST00000493161 NIFKQ9BYG3 293 aaKnown RBP15.43■□□□□ 0.06
SAMM50-204ENST00000493161 GCOM2Q9BZD3 368 aaPredicted RBP15.43■□□□□ 0.06
SAMM50-204ENST00000493161 GBP3Q9H0R5 595 aa15.43■□□□□ 0.06
SAMM50-204ENST00000493161 IRF2BPLQ9H1B7 796 aa15.43■□□□□ 0.06
SAMM50-204ENST00000493161 DACT1Q9NYF0 836 aa15.43■□□□□ 0.06
SAMM50-204ENST00000493161 SEPT9Q9UHD8 586 aaPredicted RBP15.43■□□□□ 0.06
SAMM50-204ENST00000493161 DBR1Q9UK59 544 aaKnown RBP15.43■□□□□ 0.06
SAMM50-204ENST00000493161 INPP5FQ9Y2H2 1132 aa15.43■□□□□ 0.06
SAMM50-204ENST00000493161 IGKV6-21A0A0C4DH24 114 aa15.42■□□□□ 0.06
SAMM50-204ENST00000493161 OFD1O75665 1012 aa15.42■□□□□ 0.06
SAMM50-204ENST00000493161 PSMD10O75832 226 aa15.42■□□□□ 0.06
SAMM50-204ENST00000493161 CTSAP10619 480 aa15.42■□□□□ 0.06
SAMM50-204ENST00000493161 SFNP31947 248 aa15.42■□□□□ 0.06
SAMM50-204ENST00000493161 SLC11A1P49279 550 aa15.42■□□□□ 0.06
SAMM50-204ENST00000493161 AFF1P51825 1210 aaKnown RBP15.42■□□□□ 0.06
SAMM50-204ENST00000493161 JAK3P52333 1124 aa15.42■□□□□ 0.06
SAMM50-204ENST00000493161 KRT32Q14532 448 aa15.42■□□□□ 0.06
SAMM50-204ENST00000493161 NOMO2Q5JPE7 1267 aa15.42■□□□□ 0.06
SAMM50-204ENST00000493161 ATAT1Q5SQI0 421 aa15.42■□□□□ 0.06
SAMM50-204ENST00000493161 TWF2Q6IBS0 349 aaKnown RBP15.42■□□□□ 0.06
SAMM50-204ENST00000493161 ZNF280BQ86YH2 543 aa15.42■□□□□ 0.06
SAMM50-204ENST00000493161 TRAIPQ9BWF2 469 aa15.42■□□□□ 0.06
SAMM50-204ENST00000493161 TEKT3Q9BXF9 490 aa15.42■□□□□ 0.06
SAMM50-204ENST00000493161 SLC26A6Q9BXS9 759 aa15.42■□□□□ 0.06
SAMM50-204ENST00000493161 CHST12Q9NRB3 414 aa15.42■□□□□ 0.06
SAMM50-204ENST00000493161 DZANK1Q9NVP4 752 aa15.42■□□□□ 0.06
SAMM50-204ENST00000493161 PIN4Q9Y237 131 aaKnown RBP15.42■□□□□ 0.06
SAMM50-204ENST00000493161 IRAK3Q9Y616 596 aa15.42■□□□□ 0.06
SAMM50-204ENST00000493161 NID2Q14112 1375 aa15.41■□□□□ 0.06
SAMM50-204ENST00000493161 PRR23AA6NEV1 266 aa15.41■□□□□ 0.06
SAMM50-204ENST00000493161 PI15O43692 258 aa15.41■□□□□ 0.06
SAMM50-204ENST00000493161 TDP2O95551 362 aa15.41■□□□□ 0.06
SAMM50-204ENST00000493161 SSBP05455 408 aaKnown RBP eCLIP15.41■□□□□ 0.06
SAMM50-204ENST00000493161 HMGB1P09429 215 aaKnown RBP15.41■□□□□ 0.06
SAMM50-204ENST00000493161 NBL1P41271 181 aa15.41■□□□□ 0.06
SAMM50-204ENST00000493161 POLGP54098 1239 aaPredicted RBP15.41■□□□□ 0.06
SAMM50-204ENST00000493161 PTPN14Q15678 1187 aa15.41■□□□□ 0.06
SAMM50-204ENST00000493161 CWF19L1Q69YN2 538 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms