RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 IFT122Q9HBG6 1241 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 CHST12Q9NRB3 414 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 DDX19AQ9NUU7 478 aaKnown RBP11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 DACT1Q9NYF0 836 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 KIAA1024Q9UPX6 916 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 LAMA2P24043 3122 aaKnown RBP11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 C9IYK1 514 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 DGKIO75912 1065 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 ARHGEF15O94989 841 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 ARL2P36404 184 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 PHKA2P46019 1235 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 ERVK-21P61565 698 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 ECM1Q16610 540 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 HYIQ5T013 277 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 PADI6Q6TGC4 694 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 CMTR2Q8IYT2 770 aaKnown RBP11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 FIBCD1Q8N539 461 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 RNF149Q8NC42 400 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 TRAIPQ9BWF2 469 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 NFKBIZQ9BYH8 718 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 NT5C3AQ9H0P0 336 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 POLR3FQ9H1D9 316 aaPredicted RBP11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 PRDM12Q9H4Q4 367 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 TMEM161AQ9NX61 479 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 LRFN2Q9ULH4 789 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 RWDD3Q9Y3V2 267 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 PCDHB7Q9Y5E2 793 aa11.84□□□□□ -0.51
CDC42SE1-206ENST00000492796 PP2D1A8MPX8 630 aa11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 EYA4O95677 639 aa11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 SRGAP2CP0DJJ0 459 aa11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 CYP11B2P19099 503 aa11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 LONP1P36776 959 aaKnown RBP11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 PTENP60484 403 aa11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 FAM189BP81408 668 aa11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 CATSPER4Q7RTX7 472 aa11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 IFNLR1Q8IU57 520 aaPredicted RBP11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 ARNTL2Q8WYA1 636 aa11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 CDK5RAP3Q96JB5 506 aa11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 MMTAG2Q9BU76 263 aaKnown RBP11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 BHMT2Q9H2M3 363 aa11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 AGPAT5Q9NUQ2 364 aa11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 DNM3Q9UQ16 869 aa11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 PIN4Q9Y237 131 aaKnown RBP11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 MORC2Q9Y6X9 1032 aaPredicted RBP11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 CDH23Q9H251 3354 aa11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 KIAA1671Q9BY89 1806 aa11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 FNDC1Q4ZHG4 1894 aaPredicted RBP11.83□□□□□ -0.52
CDC42SE1-206ENST00000492796 A0A087WWV3 80 aa11.82□□□□□ -0.52
CDC42SE1-206ENST00000492796 HOXA2O43364 376 aa11.82□□□□□ -0.52
CDC42SE1-206ENST00000492796 CSDE1O75534 798 aaKnown RBP11.82□□□□□ -0.52
CDC42SE1-206ENST00000492796 SKIP12755 728 aa11.82□□□□□ -0.52
CDC42SE1-206ENST00000492796 FGFR4P22455 802 aa11.82□□□□□ -0.52
CDC42SE1-206ENST00000492796 GLRA2P23416 452 aa11.82□□□□□ -0.52
CDC42SE1-206ENST00000492796 CDC25AP30304 524 aa11.82□□□□□ -0.52
CDC42SE1-206ENST00000492796 RAB27AP51159 221 aa11.82□□□□□ -0.52
CDC42SE1-206ENST00000492796 CAPSQ13938 189 aa11.82□□□□□ -0.52
CDC42SE1-206ENST00000492796 BTG3Q14201 252 aaPredicted RBP11.82□□□□□ -0.52
CDC42SE1-206ENST00000492796 PTPAQ15257 358 aa11.82□□□□□ -0.52
CDC42SE1-206ENST00000492796 ASAP3Q8TDY4 903 aa11.82□□□□□ -0.52
CDC42SE1-206ENST00000492796 RSPH1Q8WYR4 309 aa11.82□□□□□ -0.52
CDC42SE1-206ENST00000492796 CERS4Q9HA82 394 aa11.82□□□□□ -0.52
CDC42SE1-206ENST00000492796 CHD9Q3L8U1 2897 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 A0A0U1RQF3 1178 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 EPOPA6NHQ4 379 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 E9PMD0 336 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 ERLIN2O94905 339 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 EOMESO95936 686 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 ATXN8OSP0DMR3 200 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 POU3F3P20264 500 aaPredicted RBP11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 AXLP30530 894 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 UBA7P41226 1012 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 MBTD1Q05BQ5 628 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 NCBP1Q09161 790 aaKnown RBP11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 GRB10Q13322 594 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 ADGRE1Q14246 886 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 PPP2R5AQ15172 486 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 TMEM119Q4V9L6 283 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 FAM102BQ5T8I3 360 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 CDCA2Q69YH5 1023 aaPredicted RBP11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 TWF2Q6IBS0 349 aaKnown RBP11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 FAM173BQ6P4H8 233 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 MAEAQ7L5Y9 396 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 SPRED2Q7Z698 418 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 CABP7Q86V35 215 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 ECHDC2Q86YB7 292 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 FBXO22Q8NEZ5 403 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 MAFAQ8NHW3 353 aaPredicted RBP11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 KIFAP3Q92845 792 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 CLP1Q92989 425 aaKnown RBP11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 CCDC51Q96ER9 411 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 CALML4Q96GE6 196 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 ZNF396Q96N95 335 aaPredicted RBP11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 C17orf80Q9BSJ5 609 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 TIPINQ9BVW5 301 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 MINDY3Q9H8M7 445 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 GPRC5CQ9NQ84 441 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 KCND2Q9NZV8 630 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 MTUS1Q9ULD2 1270 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 SRPRBQ9Y5M8 271 aaKnown RBP11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 CLIC4Q9Y696 253 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms