RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.6■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 NPHP3-ACAD11A0A0J9YXS1 232 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 ALDH1B1P30837 517 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 ZNF746Q6NUN9 644 aaPredicted RBP22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 AGPAT1Q99943 283 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 HEMGNQ9BXL5 484 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 STK33Q9BYT3 514 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 CELF4Q9BZC1 486 aaKnown RBP22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 A0A0U1RQJ8 604 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 SLC9A1P19634 815 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 ARHGEF16Q5VV41 709 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 SH3RF1Q7Z6J0 888 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 ZC3H18Q86VM9 953 aaKnown RBP22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 JAMLQ86YT9 394 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 ADGRF4Q8IZF3 695 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 MAD1L1Q9Y6D9 718 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 GOLGA8IPA6NC78 632 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 GOLGA8JA6NMD2 632 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 SYF2O95926 243 aaKnown RBP22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 CCND1P24385 295 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 DNAJC24Q6P3W2 148 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 XXYLT1Q8NBI6 393 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 SMC1BQ8NDV3 1235 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 INTUQ9ULD6 942 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 BBS9Q3SYG4 887 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 DCAF4Q8WV16 495 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 RAPGEF5Q92565 580 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 NUDCD1Q96RS6 583 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 NUF2Q9BZD4 464 aa22.59■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 GLI1P08151 1106 aa22.58■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 FXR2P51116 673 aaKnown RBP eCLIP22.58■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 TPD52P55327 224 aaPredicted RBP22.58■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 PSMD6Q15008 389 aa22.58■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 BSPRYQ5W0U4 402 aa22.58■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 PDIK1LQ8N165 341 aa22.58■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 CCPG1Q9ULG6 757 aa22.58■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 SCINQ9Y6U3 715 aa22.58■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 A0A087X0T9 212 aa22.58■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 IQANK1A0A1B0GTG1 560 aa22.58■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 FAM228BP0C875 321 aa22.58■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 NOD2Q9HC29 1040 aa22.58■■□□□ 1.21
CHKB-CPT1B-203ENST00000492556 TNS3Q68CZ2 1445 aa22.58■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 METTL13Q8N6R0 699 aa22.58■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 COL15A1P39059 1388 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 TULP2O00295 520 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 TOM1O60784 492 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 TRIM49P0CI25 452 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 TRIM49CP0CI26 452 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 PMS1P54277 932 aaKnown RBP22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 BASP1P80723 227 aaKnown RBP22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 SCYL2Q6P3W7 929 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 GOLPH3Q9H4A6 298 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 FGFR1OP2Q9NVK5 253 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 TJP3O95049 919 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 HDAC7Q8WUI4 952 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 BBOX1O75936 387 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 HAUS5O94927 633 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 DYNLT1P63172 113 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 KRT17Q04695 432 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 TMEM139Q8IV31 216 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 MDM1Q8TC05 714 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 C1orf54Q8WWF1 131 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 CDR2Q01850 454 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 MEA1Q16626 185 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 OSBPL1AQ9BXW6 950 aa22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 DBR1Q9UK59 544 aaKnown RBP22.57■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 GDF11O95390 407 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 P4HA1P13674 534 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 SKOR1P84550 965 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 MAML1Q92585 1016 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 NBPF3Q9H094 633 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 MCF2LO15068 1137 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 SCTRP47872 440 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 VAMP7P51809 220 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 MAP7D3Q8IWC1 876 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 PITPNM2Q9BZ72 1349 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 TMEM253P0C7T8 217 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 STAT4Q14765 748 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 KLHDC7AQ5VTJ3 777 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 CENPPQ6IPU0 288 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 RINT1Q6NUQ1 792 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 SEMA6BQ9H3T3 888 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 ARL1P40616 181 aaPredicted RBP22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 SLC8A3P57103 927 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 IRX1P78414 480 aaPredicted RBP22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 EARS2Q5JPH6 523 aaKnown RBP22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 TPCN2Q8NHX9 752 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 CDKL2Q92772 493 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 ROPN1BQ9BZX4 212 aaPredicted RBP22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 ROPN1Q9HAT0 212 aaPredicted RBP22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 USH1CQ9Y6N9 552 aa22.56■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 RASSF10A6NK89 507 aa22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 TNNC2P02585 160 aa22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 STAT2P52630 851 aa22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 RBM41Q96IZ5 413 aaKnown RBP22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 SNAP25P60880 206 aa22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 GPR101Q96P66 508 aaPredicted RBP22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 GINM1Q9NU53 330 aa22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 ANKFY1Q9P2R3 1169 aa22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 PI4KBQ9UBF8 816 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms