RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 POU5F1BQ06416 359 aa16.88■□□□□ 0.29
SS18L1-204ENST00000491916 C1orf186Q6ZWK4 172 aa16.88■□□□□ 0.29
SS18L1-204ENST00000491916 SPRED2Q7Z698 418 aa16.88■□□□□ 0.29
SS18L1-204ENST00000491916 IFNLR1Q8IU57 520 aaPredicted RBP16.88■□□□□ 0.29
SS18L1-204ENST00000491916 DAW1Q8N136 415 aa16.88■□□□□ 0.29
SS18L1-204ENST00000491916 CHAMP1Q96JM3 812 aa16.88■□□□□ 0.29
SS18L1-204ENST00000491916 NLRP4Q96MN2 994 aa16.88■□□□□ 0.29
SS18L1-204ENST00000491916 PLIN2Q99541 437 aa16.88■□□□□ 0.29
SS18L1-204ENST00000491916 FTHL17Q9BXU8 183 aa16.88■□□□□ 0.29
SS18L1-204ENST00000491916 GCOM2Q9BZD3 368 aaPredicted RBP16.88■□□□□ 0.29
SS18L1-204ENST00000491916 CCSER1Q9C0I3 900 aa16.88■□□□□ 0.29
SS18L1-204ENST00000491916 POLD4Q9HCU8 107 aa16.88■□□□□ 0.29
SS18L1-204ENST00000491916 RGS18Q9NS28 235 aa16.88■□□□□ 0.29
SS18L1-204ENST00000491916 BLOC1S4Q9NUP1 217 aa16.88■□□□□ 0.29
SS18L1-204ENST00000491916 DNM3Q9UQ16 869 aa16.88■□□□□ 0.29
SS18L1-204ENST00000491916 TMEM265A0A087WTH1 108 aa16.87■□□□□ 0.29
SS18L1-204ENST00000491916 ARHGEF35A5YM69 484 aa16.87■□□□□ 0.29
SS18L1-204ENST00000491916 SLC12A3P55017 1021 aa16.87■□□□□ 0.29
SS18L1-204ENST00000491916 PTENP60484 403 aa16.87■□□□□ 0.29
SS18L1-204ENST00000491916 MAPK7Q13164 816 aa16.87■□□□□ 0.29
SS18L1-204ENST00000491916 BECN1Q14457 450 aa16.87■□□□□ 0.29
SS18L1-204ENST00000491916 MXD4Q14582 209 aaPredicted RBP16.87■□□□□ 0.29
SS18L1-204ENST00000491916 KARSQ15046 597 aaKnown RBP16.87■□□□□ 0.29
SS18L1-204ENST00000491916 RAB30Q15771 203 aa16.87■□□□□ 0.29
SS18L1-204ENST00000491916 FOXD4L6Q3SYB3 417 aaPredicted RBP16.87■□□□□ 0.29
SS18L1-204ENST00000491916 RINT1Q6NUQ1 792 aa16.87■□□□□ 0.29
SS18L1-204ENST00000491916 FAM117BQ6P1L5 589 aa16.87■□□□□ 0.29
SS18L1-204ENST00000491916 FOXD4L3Q6VB84 417 aaPredicted RBP16.87■□□□□ 0.29
SS18L1-204ENST00000491916 FAM43BQ6ZT52 329 aaPredicted RBP16.87■□□□□ 0.29
SS18L1-204ENST00000491916 MAEAQ7L5Y9 396 aa16.87■□□□□ 0.29
SS18L1-204ENST00000491916 KCTD17Q8N5Z5 321 aa16.87■□□□□ 0.29
SS18L1-204ENST00000491916 DEFB123Q8N688 67 aa16.87■□□□□ 0.29
SS18L1-204ENST00000491916 RNF149Q8NC42 400 aa16.87■□□□□ 0.29
SS18L1-204ENST00000491916 SP7Q8TDD2 431 aaPredicted RBP16.87■□□□□ 0.29
SS18L1-204ENST00000491916 RAD9AQ99638 391 aa16.87■□□□□ 0.29
SS18L1-204ENST00000491916 ADAM2Q99965 735 aa16.87■□□□□ 0.29
SS18L1-204ENST00000491916 RUSC1Q9BVN2 902 aa16.87■□□□□ 0.29
SS18L1-204ENST00000491916 POLR3FQ9H1D9 316 aaPredicted RBP16.87■□□□□ 0.29
SS18L1-204ENST00000491916 MTMR10Q9NXD2 777 aa16.87■□□□□ 0.29
SS18L1-204ENST00000491916 A0A087X0B3 334 aa16.86■□□□□ 0.29
SS18L1-204ENST00000491916 TLL1O43897 1013 aa16.86■□□□□ 0.29
SS18L1-204ENST00000491916 YEATS4O95619 227 aa16.86■□□□□ 0.29
SS18L1-204ENST00000491916 CA3P07451 260 aa16.86■□□□□ 0.29
SS18L1-204ENST00000491916 HOXA11P31270 313 aaPredicted RBP16.86■□□□□ 0.29
SS18L1-204ENST00000491916 TAP1Q03518 808 aa16.86■□□□□ 0.29
SS18L1-204ENST00000491916 DNM1Q05193 864 aaKnown RBP16.86■□□□□ 0.29
SS18L1-204ENST00000491916 AMHR2Q16671 573 aa16.86■□□□□ 0.29
SS18L1-204ENST00000491916 ARSHQ5FYA8 562 aa16.86■□□□□ 0.29
SS18L1-204ENST00000491916 SRGAP1Q7Z6B7 1085 aa16.86■□□□□ 0.29
SS18L1-204ENST00000491916 SYT2Q8N9I0 419 aaPredicted RBP16.86■□□□□ 0.29
SS18L1-204ENST00000491916 MCPH1Q8NEM0 835 aa16.86■□□□□ 0.29
SS18L1-204ENST00000491916 SYMPKQ92797 1274 aaKnown RBP16.86■□□□□ 0.29
SS18L1-204ENST00000491916 ZNF689Q96CS4 500 aaPredicted RBP16.86■□□□□ 0.29
SS18L1-204ENST00000491916 ZNF396Q96N95 335 aaPredicted RBP16.86■□□□□ 0.29
SS18L1-204ENST00000491916 GUCD1Q96NT3 240 aa16.86■□□□□ 0.29
SS18L1-204ENST00000491916 NFKBIZQ9BYH8 718 aa16.86■□□□□ 0.29
SS18L1-204ENST00000491916 NT5C3AQ9H0P0 336 aa16.86■□□□□ 0.29
SS18L1-204ENST00000491916 ZNF576Q9H609 170 aa16.86■□□□□ 0.29
SS18L1-204ENST00000491916 MSRAQ9UJ68 235 aa16.86■□□□□ 0.29
SS18L1-204ENST00000491916 SPTLC2O15270 562 aa16.85■□□□□ 0.29
SS18L1-204ENST00000491916 PPP6R2O75170 966 aa16.85■□□□□ 0.29
SS18L1-204ENST00000491916 UPP2O95045 317 aa16.85■□□□□ 0.29
SS18L1-204ENST00000491916 LINC00271P0C7V0 271 aa16.85■□□□□ 0.29
SS18L1-204ENST00000491916 PLCG1P19174 1290 aa16.85■□□□□ 0.29
SS18L1-204ENST00000491916 UBA7P41226 1012 aa16.85■□□□□ 0.29
SS18L1-204ENST00000491916 ZRSR1Q15695 479 aaKnown RBP16.85■□□□□ 0.29
SS18L1-204ENST00000491916 NAALADL2Q58DX5 795 aa16.85■□□□□ 0.29
SS18L1-204ENST00000491916 ODR4Q5SWX8 454 aa16.85■□□□□ 0.29
SS18L1-204ENST00000491916 AXDND1Q5T1B0 1012 aaPredicted RBP16.85■□□□□ 0.29
SS18L1-204ENST00000491916 CDCA2Q69YH5 1023 aaPredicted RBP16.85■□□□□ 0.29
SS18L1-204ENST00000491916 KRI1Q8N9T8 703 aaKnown RBP16.85■□□□□ 0.29
SS18L1-204ENST00000491916 SCLT1Q96NL6 688 aa16.85■□□□□ 0.29
SS18L1-204ENST00000491916 RNF19AQ9NV58 838 aa16.85■□□□□ 0.29
SS18L1-204ENST00000491916 TCHHQ07283 1943 aa16.84■□□□□ 0.29
SS18L1-204ENST00000491916 DGKIO75912 1065 aa16.84■□□□□ 0.29
SS18L1-204ENST00000491916 PLA2G4BP0C869 781 aa16.84■□□□□ 0.29
SS18L1-204ENST00000491916 ATF7P17544 494 aaPredicted RBP16.84■□□□□ 0.29
SS18L1-204ENST00000491916 SARSP49591 514 aaKnown RBP16.84■□□□□ 0.29
SS18L1-204ENST00000491916 MBTD1Q05BQ5 628 aa16.84■□□□□ 0.29
SS18L1-204ENST00000491916 GRIN2CQ14957 1233 aa16.84■□□□□ 0.29
SS18L1-204ENST00000491916 STK38Q15208 465 aa16.84■□□□□ 0.29
SS18L1-204ENST00000491916 FAM102BQ5T8I3 360 aa16.84■□□□□ 0.29
SS18L1-204ENST00000491916 ZNF697Q5TEC3 545 aa16.84■□□□□ 0.29
SS18L1-204ENST00000491916 ATL3Q6DD88 541 aa16.84■□□□□ 0.29
SS18L1-204ENST00000491916 SLC24A5Q71RS6 500 aa16.84■□□□□ 0.29
SS18L1-204ENST00000491916 CCDC43Q96MW1 224 aaKnown RBP16.84■□□□□ 0.29
SS18L1-204ENST00000491916 FAM161BQ96MY7 647 aa16.84■□□□□ 0.29
SS18L1-204ENST00000491916 TRAIPQ9BWF2 469 aa16.84■□□□□ 0.29
SS18L1-204ENST00000491916 INO80BQ9C086 356 aaPredicted RBP16.84■□□□□ 0.29
SS18L1-204ENST00000491916 DAXXQ9UER7 740 aaPredicted RBP16.84■□□□□ 0.29
SS18L1-204ENST00000491916 RCOR1Q9UKL0 485 aa16.84■□□□□ 0.29
SS18L1-204ENST00000491916 INSL6Q9Y581 213 aa16.84■□□□□ 0.29
SS18L1-204ENST00000491916 ADGRA3Q8IWK6 1321 aa16.84■□□□□ 0.29
SS18L1-204ENST00000491916 LINC01553A4QN01 128 aa16.83■□□□□ 0.28
SS18L1-204ENST00000491916 EPOPA6NHQ4 379 aa16.83■□□□□ 0.28
SS18L1-204ENST00000491916 GUCY2CP25092 1073 aa16.83■□□□□ 0.28
SS18L1-204ENST00000491916 ZNF598Q86UK7 904 aaKnown RBP16.83■□□□□ 0.28
SS18L1-204ENST00000491916 NPAS4Q8IUM7 802 aa16.83■□□□□ 0.28
SS18L1-204ENST00000491916 ZBED2Q9BTP6 218 aa16.83■□□□□ 0.28
SS18L1-204ENST00000491916 CHST12Q9NRB3 414 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms