RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 CDC42EP1Q00587 391 aa9.95□□□□□ -0.82
COL6A4P1-203ENST00000491915 DLX2Q07687 328 aaPredicted RBP9.95□□□□□ -0.82
COL6A4P1-203ENST00000491915 LAMTOR4Q0VGL1 99 aa9.95□□□□□ -0.82
COL6A4P1-203ENST00000491915 ECM1Q16610 540 aa9.95□□□□□ -0.82
COL6A4P1-203ENST00000491915 LONRF3Q496Y0 759 aa9.95□□□□□ -0.82
COL6A4P1-203ENST00000491915 FAM43BQ6ZT52 329 aaPredicted RBP9.95□□□□□ -0.82
COL6A4P1-203ENST00000491915 OTUD6AQ7L8S5 288 aa9.95□□□□□ -0.82
COL6A4P1-203ENST00000491915 FERMT3Q86UX7 667 aa9.95□□□□□ -0.82
COL6A4P1-203ENST00000491915 CATSPER3Q86XQ3 398 aa9.95□□□□□ -0.82
COL6A4P1-203ENST00000491915 FAM184AQ8NB25 1140 aa9.95□□□□□ -0.82
COL6A4P1-203ENST00000491915 LPPQ93052 612 aa9.95□□□□□ -0.82
COL6A4P1-203ENST00000491915 P2RX5Q93086 422 aa9.95□□□□□ -0.82
COL6A4P1-203ENST00000491915 NLRP4Q96MN2 994 aa9.95□□□□□ -0.82
COL6A4P1-203ENST00000491915 SCLT1Q96NL6 688 aa9.95□□□□□ -0.82
COL6A4P1-203ENST00000491915 C11orf84Q9BUA3 381 aaPredicted RBP9.95□□□□□ -0.82
COL6A4P1-203ENST00000491915 UBE2ZQ9H832 354 aaPredicted RBP9.95□□□□□ -0.82
COL6A4P1-203ENST00000491915 COL4A3BPQ9Y5P4 624 aa9.95□□□□□ -0.82
COL6A4P1-203ENST00000491915 CUL9Q8IWT3 2517 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 FNDC1Q4ZHG4 1894 aaPredicted RBP9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 NLRC5Q86WI3 1866 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 XRCC6P12956 609 aaKnown RBP eCLIP9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 KCNA5P22460 613 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 RFC5P40937 340 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 PHKA2P46019 1235 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 POLGP54098 1239 aaPredicted RBP9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 ERVFC1P60507 584 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 HYAL1Q12794 435 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 COL19A1Q14993 1142 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 EMC2Q15006 297 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 IL17AQ16552 155 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 LEXMQ3ZCV2 418 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 NAALADL2Q58DX5 795 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 TTC38Q5R3I4 469 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 UBXN11Q5T124 520 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 CATSPER4Q7RTX7 472 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 ADGRD2Q7Z7M1 963 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 ZNF410Q86VK4 478 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 NOSTRINQ8IVI9 506 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 RNF169Q8NCN4 708 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 NEK9Q8TD19 979 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 ASAP3Q8TDY4 903 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 POF1BQ8WVV4 589 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 SLC7A3Q8WY07 619 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 TBC1D32Q96NH3 1257 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 JPH2Q9BR39 696 aaPredicted RBP9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 TMEM117Q9H0C3 514 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 LMAN2LQ9H0V9 348 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 NSUN3Q9H649 340 aaKnown RBP9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 IGFLR1Q9H665 355 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 POLD4Q9HCU8 107 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 CD320Q9NPF0 282 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 CHST12Q9NRB3 414 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 ANKEF1Q9NU02 776 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 RWDD3Q9Y3V2 267 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 PCDHB6Q9Y5E3 794 aa9.94□□□□□ -0.82
COL6A4P1-203ENST00000491915 COL4A4P53420 1690 aaPredicted RBP9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 H3BQ06 376 aaPredicted RBP9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 TNFRSF10AO00220 468 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 LINC01565O15544 149 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 ASAP2O43150 1006 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 ZNF623O75123 536 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 EOMESO95936 686 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 KCNA4P22459 653 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 PBX3P40426 434 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 RARRES1P49788 294 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 AFF1P51825 1210 aaKnown RBP9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 PTENP60484 403 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 ADAM15Q13444 863 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 AAK1Q2M2I8 961 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 CTC1Q2NKJ3 1217 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 TIGD5Q53EQ6 642 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 SPOUT1Q5T280 376 aaKnown RBP9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 MAEAQ7L5Y9 396 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 SRGAP1Q7Z6B7 1085 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 COLGALT1Q8NBJ5 622 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 RNF149Q8NC42 400 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 HELQQ8TDG4 1101 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 PSPC1Q8WXF1 523 aaKnown RBP9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 UHRF1Q96T88 793 aaPredicted RBP9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 MTRQ99707 1265 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 POLR3CQ9BUI4 534 aaPredicted RBP9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 TRAIPQ9BWF2 469 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 INO80BQ9C086 356 aaPredicted RBP9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 GPRC5CQ9NQ84 441 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 PPME1Q9Y570 386 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 PCDHB12Q9Y5F1 795 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 NCOR1O75376 2440 aa9.93□□□□□ -0.82
COL6A4P1-203ENST00000491915 GRXCR2A6NFK2 248 aa9.92□□□□□ -0.82
COL6A4P1-203ENST00000491915 NT5C1B-RDH14C9J2C7 533 aa9.92□□□□□ -0.82
COL6A4P1-203ENST00000491915 PER2O15055 1255 aa9.92□□□□□ -0.82
COL6A4P1-203ENST00000491915 ST18O60284 1047 aa9.92□□□□□ -0.82
COL6A4P1-203ENST00000491915 OFD1O75665 1012 aa9.92□□□□□ -0.82
COL6A4P1-203ENST00000491915 FGF18O76093 207 aa9.92□□□□□ -0.82
COL6A4P1-203ENST00000491915 OR52Z1P0C646 297 aa9.92□□□□□ -0.82
COL6A4P1-203ENST00000491915 IL9P15248 144 aa9.92□□□□□ -0.82
COL6A4P1-203ENST00000491915 GLRA2P23416 452 aa9.92□□□□□ -0.82
COL6A4P1-203ENST00000491915 GJB2P29033 226 aa9.92□□□□□ -0.82
COL6A4P1-203ENST00000491915 RBM10P98175 930 aaKnown RBP9.92□□□□□ -0.82
COL6A4P1-203ENST00000491915 PTGDRQ13258 359 aa9.92□□□□□ -0.82
COL6A4P1-203ENST00000491915 TWF2Q6IBS0 349 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms